PI0003389 (gene) Melon (PI 482460) v1

Overview
NamePI0003389
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionmethyl-CpG-binding domain-containing protein 8 isoform X1
Locationchr03: 2507178 .. 2519359 (-)
RNA-Seq ExpressionPI0003389
SyntenyPI0003389
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGGCTTCTCCCTCCCTTTTTTCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCATCCACAATTCGCCCTCAATCTCCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTAATCTCTTTAATCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAGTTACGGCGACGGAGATGAGGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATTTTCCAGAGTATTCCTGTTGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGGCGGAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTGTAGATGTAAGATAAACTGTTGAATTGTTCGTTCTTTAAATTTGATTGATTGTTCTTTGCTATATTTTATATATTATTTGCTATTTCTTTTCCAAATTTATTGAAATTATTTTTTGAACCTCTTGAAACAGATAGATAGAAAGAAAGAAAATGCTTCGATAACAGTATTTTGGTTTTCGATATTTTTTTTTGTTAATAATAAAAAAATGCAATGTTCGTTATTTATTTAGGTTTTCCCATTTCTTTTTCCAATTTTTTTGTTTTATAAAAAGTACATTTTTGTTAATAATCTATTGTGTAATTTATTTAGGTTTTCCATTTTCTTTTTCTTTCAGTGAATATTGCTTTGTTATTATCTTTCTCAAATTTTTTTTTGTTTTTTTTTTTTAAATTTAATTAATTTTTTTTCATTTGAAGTGCATGTGTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTGTTTTACATTATTATTATACTCGCTGAGCCTCTTCCTATGTGAATTTATATATTTTGGTAATATTTGTTTGTAAATTGTCTGACTTGTTTTTTTCGTTTTTTACTTATTAGTTTATTGAATTTTGCATAATTCAACCATTTTGTCTTTGATGTTATACTTTCTTGAAATTGAGCACCACACTCCCTGATTTAATTAGAATCCATTCATTTATGAGTTTTACCATTAGGGTGATTCAAACTTCTGACATTTAGCTAATTAGATATTCCAAACATCTGGTTAACTATTAGAATCCATCATTTCCCAACTATAGGTTTCTTGAAATTTTAGTATACCATGCCATAGGAGTTGGAAGTTACAATAATTCATTTCAAAATAAAAAATGTCACCAAGACTCAACTACCAAAAACACCTGAATTTGAGTAAACTAAGTTCTTATGCTATTAATTAATACTAAGTTGACATTATTGTAAAGAACATAGTGGAGTATCCGTTTAGGTGGACTCAAAGAGAATGAGTTCCAACCATAGTACTAACATATCCAAGATTTCAAATCCTATAAATTTTCAACATAATCAAATATTGCGGGTTACCGTACGTTGCAAAATCTTCATCAATAGGGAGATTTTGTGTCCTGTTTTTTCTTCCTTCACTTGAGCCCTTTTCATCTCTAACGTAAGCTATAATTTCGACAGAATAAGGGGGTGTCTAGATTACCTGAAAAGATCTTCTAAGTATATTAGAGACACACCCAGAAGTAGACATATCCGTACCTTGTGCAAAAGTTGGCTTCTGTTGAAATTTGAGTTGTCCGCAATCCACCCTAGAATTATTCATCTCTTGAACCTCAAAATTTCTTATAAAATTTCACAATTTCAATCGAAATCTTCCATCCATTCTTAACTATTGAGTATAATCAGTGAAATGCAAGAATGGGGGTATCCGAACTGTAGTTTTAGTTTCCACTTTATCATGTTGTTTAGCAAATTTTGTGATCCTTCGAGTCTTAGATTACTCTCAATTTGGATCTGGGAGGATTAATCATTCAGGGAAATCTCCTCGTGAAGCAGATAACTAATAAGCTATACTTTGGACAAAGAAGATGCTATGCGATGATGGTAGTAGGTTGCAGAGAACACCCTTATAGAGCAAGGAAGAGTGGGTCATTATTTGTAGTTCAGACTTTCACAAGTTTTATTTGAGGGTCGAAGGAGATGATTTTGAAATCGTGGCATCTTTAAAGAATAATTTGTATGATTCTTGGGGATTGTCTGAGGTTTAATGCTGCTCCATATGAACAAAGACTAGAGATTTGTTGAAGTCCTGGGTAAATATACAGTTTCACATTTGGGTTAATGAGCGGAGTTCTTAAGTCTGAAAAGTTATGAGGCCTGAAAAATTGTCAGTTGTGGAGTCTACTTTATAATGAGTTAATAAAGGCATGAAAATGATGTTTGTTTTTAGTTGTAGGTGGGGCCACGAACTCCTTAGATCAAACAAGAAGAGTAGTAACAACTTTATTCCTTCGAGCTCTAACTCCTTGAGCTTGTCGGTCGAATTGTTACTGTGAATGTTAACTCGTAGAATAGACATTTGGAAACATTTCTGTGGACGATTGGTTGGCAGGAAGTTTAAGATTTTGGTGTTAGCAGGAAGTTCGGTAATTGGTTGTTTGTGGGAGGAAAATGTTGGGAACTAACTTTCAAGTTTCAACAGTACTTGGAAAATGAAATTAAAATGGATGGTAAAGTAGTTGATGAGATGCCCTTGAAATCCGTGAAAAAGTTTTTGCTAAAATCTTGGGTGCACCAGATTCGAGGTTCGGTGTCTTCATTGTCTGGCTCTATAACTCGTAATAAAACCTACGCCATGGTTTTGGGATGAATTGGATTGGAATAAACTCAGCTCAGTTTAGGTTGAATTATTATTATTATTATTATGGACAAATTAACCATATTTGGGTCTTAATAAACTTTGATCTGCTTTTTCAAATTAAGTTTTCGAGCTTTTTGCTAGCATTAGTGAATATTTTTCTTTTTTTATTAGGATAATACTTGGGATGGGTGCATCCCAAGATGCACTCATTCCTATGATTCCCTCCTCATCACTCAAACTAGAAAATAATTAAAAAAACTAGAAAATAATTAAAATAATTAAAAAAGAAATAAAAGAATTTGTCCCATGACAAAATGACAACTTAGTTAATAGGTTGTATGATTTTTTTTTTTTTGACTTATGAGACATCAGTCAGAGCACTCGACAGATCATGCTCACTTGAGAGAAAGCTAGGTGAATCGACAACATTATGTCTTGAAATCACCCCGAAGAGTTCAACAATGCTTTCACGTAATTGCAGATTAAAAATGCTATTTTTGTGAGGATCAATGTTGGTCCTTTCAAGTGCAACAGAGGGACTAGAAATTTTTGTCGAAAATTATAGTGATTTATTCTATAGGTCTTAGTGGTGAGTGAAGAAGTTATGATCGAAATGTTCTTAGCGCTTCTTGAGTTCAATGGCCTCGCAAAGGATTCAGTTTAGAGCCAGAGGGATAAAAGAACAAAGAAAGGGATCAAACAGAGAGAGACAGCCCCATAGCTTGAAGAAAAAAGAGTGGAGTGAAAAATAGGGTATTCAAATAACCCGATCCGGAAGGGTTGGGTTAGTTTTTATTTTGGGTTGGGTTGGACTTGGGATACATTTTTAAAATTTCGGGTTGACCCAACCCAACTTGAATTTCTAAAATTATTAAAATTTATATATTATAACTTAAAAATATTATAATTCATGTTATGGAGGTTGTAATAGATATGTTAGATTTTGATATTTAACATTTGAGTTTATGAAATTTTAGTTATTAATATGTCTTGTATATAAATTTAAGTTAATAAAAAATATATTTAAAAAAAGAAAAGAAAAGAAATAAATAACTCAAAAACTCAACCAAACTGGGTTGAGAATCGTATTTGGATAATTTGGGTTGTCAATTTGACCAATCAGAAAATTCAGTTTAATCCCAAAAGTCTCTTAAATCTAACCCAACTCATTAGGAGAAAGTGAGGAAAATATATTAAAATTGTTTGGAACCCAAGTCTTTGTTGTTTTGAAAAAGAAAGGTCAAATTTTATTTGTACCAAAATACTCACGCTAGTTTGTAAAAAAGAAAAAGAAAAAGAAAACACAATTAATTTGTGGTTCGTAAGTTAAGAAAATATAATTGTTTGACCTAACACTCACGCTGGTTTGTACATAATTGGGGCCAAGAGATCTGTTAAGTAAAAAGTTTGTTAGTGAAATGGTTTTTTCTTTTTTTTTTTTGGAAAAAAGTGACATGATATTTTTAATGTGATTTCTTTAGGATGTCTATATATAAATTTAACGTAAGTATATGTCTAAGAAAGCTTATTTGAAAGCGTGTAGGAAGTACGCATGTTTTGTTTTATGCCAAGTATCAGCGTCGATGTGTAAATGTGGGGTCCAGTGTTTTCTAAAGGATTTGAAGTGATGTTTGGATTGGATGCGCGATCAATCCCGTATAAAGCACTAAGCCATCTCATCCAATTTTCAAATAATTATTTTTAAAAAAGAAAAATTGGCTAAAATAAAAAACTTAAGAGAAAACAAAAAAGGAAAGGGGAAAAAACCAGGCACGCCAAATTATCCACACATTAGAAAATTAAACAAGAACAAGGTTTGAAATGTGAACGTGGATTGAAGTGTTGAGGTCTCAAATTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAATCGATAGAAATGTAAACACTTTGATTATTTTTGGAATTTTTTATAAAAAAATTTAAAAAAATTCAAAAGATGTTGAAGTTAAAGTTTGGAAAATTATCTGTTGAATTATCAAAATATAGCAAAAATTTAGATTTTATTAATGATAGATTCTGTCTATTATTGATAGAATTTGAAAATTTGCTATATTTTGTATATATTTCAGTTTATTTTGCTATATTTGAAAATGTACTTTAAAGTTTTACACTTTTTAAATAAGTTAACATGTTTATTGTTTATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGTACATTTTTACATTTCATAGATTTGTGAGATTTCTTTTACAATATGATGAAAATGTCATTGTCAAACCTATAGAAATACGAACATGTCGAGATGTTGATAGAAATTTAATATTGTGAACACGACATGAATTTTTATGGGCATGCTCTTGTTTGAGACATTAATTTGTGAGAATAAGATTTCTTTGTTTTAGGGTGTCTCCATTAGATTCTTTGATAATATTTCATCCCAAATTTACTTCTATTAGTTAAATTTAATAATATTTAATATTAGTAGTGAATCGACATTTCTATTATATTATAGAAAATTTGAGTAAATGGTAACAAAAATATCGACTATCACTCATGTTGACATATTATTAGTAATGAAAAATTATAACTTACCTTAATTGTATGTTTATGTGTTCATTTAAATGAGTCTTAATGAAATTTTAAAGTATCTATATTTTTCTAGACATAGTGTTGGGATAGAGGTTACAAATGTTATTATTAGTTAAGAAGATTCTAGCTGGTAGAGGGCTTAAGTAGAGTATAAGTCAACCTTTCCTAACTATAATGTTAGGTTATTGTCAGTCGATCACCCTTGGCTCAAATCGGTGGGTGACCACCGACATGCCAATATCTTTCCACTGAGGTTGGTTACATCGATTGATTGACCACATTGATAGTTGATCGATTTTGGTTGACACCAAAATGAAGGGAGAACTTCAACGAGCTGATGGAGAAACAAGGAAAAATGGTCAAAGAAAAGAGAAAGAAGAAGAAGAGAAGAGGAGTAATGGATAATGAAGGGAGGAAGTAACTACCACAAAAGATTGAAAAAAGGGAAATGGAGAGGAAGATAAGATAATGAAGGTAGGAGACACCTGGGCAGCACAAATACTGACACGCAACATGGCGATATGTAATTTTCCAAAAAAGTAGGACATGACACATCGGGGACACGCCAATTTTTTAGTAAAAAAAATTAACATATTACATAACAAGGATTTCAATTAAAAACATCAAAATAACAAGTTTTAGTAGAGTAGTTTGTTCAACACAACAAAAGCCAAAAGGTAAAAAACTACAATTGACAGAAATTGGCGACTAGGTTGGCGGCGACTAGCGAGAGGGTGGTGATGGTTAGGGTAGAGAGTGTTTGGGGAGAGAATCGGAGAAAGAAGGTGGAGTGCGTGAAACTTTTCATATGGAAAAGAGAATTAAAAAAAGTTACAAAAAAAAAAAAAATTGGTGTGTCGGAGACATGTTGGTGGCATGTCGGTGTTAGAAACGTGTCCAACACTGATACTTGGTCATCTTAGGAGTGTTGGTGCTTCTTAGGTAACTACCACAAAGGATTAGAAAGGCTGGAGTCAGTTTGATGTTGTCGTTGCCGATAGCATTAGATACCTTTTTTATAAAAAAATGATACTAATTAAAGTTGACTGGTTAGAGCCTTTTAGGCTCTCCAACCACCACGTGCCAACCTGATTGATCGACTTGATTTGTTGATCTGTGTTGCTCACCTCTAAAATCACCATCTAGATTGACTAAATTATGTGGTAGTAGCATTACATATTCATTGACAAATGATAACTATAGTATATAGATGATGCAACTAATGATGAGTTTGTTTAGCCAAGTGATATCTCTTATCAAAATTGGGGTTGGGGTGAGCATGAATCGAAAACTCGAGTTGATTGCAAAAAGTGATTGAATTGACTTTGGTCAATTGGTTTAATGTTATATGTATATTGAAGTCGATCGGTTAGCAAGCCTAGTAAGACTTAAACTGACAGAATCGATTGGCCTTTGTAAAAGAAACAATACAATACAGACTGCAGACAGTTGAATCGACTGGCCTTTGTAAAATAAACAATACAATACTGAATGCAGACAGTCAGACGTATCTTGATACTCACCTTGGGAAGACTAAAGGTTTGTATGTATTTATTTGTTTTTCTTAAAATACAATACAATAAAATTTAGGGGTGAGCATGATAGATAAAAAACGAGTCGTCCAACCGAACCAAAGTCAGTCGATTGGAAAGAAGAGGGGTTCATTAGTGTCGGTTTGGGAAAATAAAAAATTGAAAGTAGAGTTAAATCGACCACCATAGTTGACTAACTTTTATTCTTTGACCGTTAAGGTCGATTTGAACATTTACTAAACTGACCATAGTCAGTTCGTTGGCTGAGTGGTCGAAAAATTGACTCCGATCGACCGATGCACACCAAATTAATTCTATTATTTTTTTAATTAAACAATTAATTTCCACCATTAAAGTCCATATAAACAGTTAATTTCACATCAACAATCTCCTTATAAAGAGATTTTTTTTTTGGGAAAGAAACAAACTTCATAAAAGCCCAAAATCAAAGGGGCAACGAACACAAAAGGTCCCCAAAAATAGTTTCATGCATCTAGCTGGGGAAGCTAGCAACCCAACTTTTTCTACAATCATCCAAATCGGAAGAAACAAAAGTATCAAACAAACTAGAGAAACCAGCATCATGACGAGCTACCAAATGAGCAACTCGATTTCTATCATGAGGACAAAAGAGCAAGAGACATTTCTTGAGTGCATCGCCAACACACTGAATTATCCAATTATCTAAACCCTTAACCCTATCAAATTATCTAATTATCCATATATAAAGTCAAAATGTTCACTAATTTTACCTGAATGGAAGAAACTTTTTCTTGTGCAGAACCCTAAAGGGGTGTTTTGCCCCCAACTTCAATGTGTGGCTCAATGTTCGGGGCTCCAATTGAAATAGTTGGTGTTTTCAACTAATTATAACCAAACTCCGATATTATTATTTCAAGTCTCTATTTGTTATAGTGTTTACTATTTCTTAATCATCCTATCTTTTTCTCTTTGTTACTGTGTTTACTATTTTCTACACAGACAAAAATAGTTTGGATCTCGAACACAGACTATTATAACACACAAACTATAACAATCAACTCAACACTTCAAACACCCTCTAAATAACTTGGAATCTCTTGTAGATCAATAACCCATAATTTTCATTGTGAAGCTACAAAGGCATGGCATCGTAGATATTAGAGAAGTGACTTGTTTTTTATTTTTGCTAGTTTTAAATGGTTATAGGCTTGTTTGTTGATAATATTCTTGTTTCTTGTTTCACATTTTATTTTTTATTTCATTTCCTACTTTTGTGAAATGAAAAGTAAAGTTGTGCGGAGCAATTTGTTTTTATTTTGTTTTTACTAAAAAAGAACGATAACTCTTTGATAATTGTTTTCCGTTCTCTCAAATGTTATTTTAAAATATTGAAAATCTATTTGCATATTGTTTTTATACAAAATTCATAATGATTATATGATTATGTTATTTAATTTTGACATTTATTAATTATCTTCAAATTTTAAAATAAGTTTTCTTAAAAAAATTATCCTTTTATTTATGTTTTTCAATTTTAAAAAATAGGAAACAAGAAGCTGCATGGTCGTTTAGTTATATTGTTATCTTTTAATCTATTTCTATTTCGTTTAGAATTGTTTGTTTGGTAACTTATTACTTTTTTTCCTTTTTAGTTCATCAATACCTAAGTGAGAATTCTAACATCTGACCTTTTGGTTGAGGTAAATTTTAAGACTGATTAATGGGTCAACATCGGGTTTTAGCTAGCATTGATGCTCAAACCCTATTTTTTGTTACATGATGTCGTCGAACGATTGATTGGTTAGTTGATTTCATATGAATAATATTTTTTTAATGATAAATTGAAATTAAATGAAAAATGAAAATGTAGTTAACGATTTGATCCTATGATCCGTTCCTATCCTTGTCCTCACTTATATTTCATTCTCCATCCCTATGAAATTTCTCATTAATTTCGTGGGGATCGGGGTGGGTGTTTCCCATGGGGAATTTTCTCTATTTTATTTTGTTTTAAAAAACAAGACATTTAATTCAAAGTTTTGTTTTCAAATATAACAAAACTTCTGAAAATATTCATAAAAATAGCAAATTTTTACTTTCTATCAGGGATAGTTTGTGACAGACCCAAATAGACATTCAATTTAAACAAATTCATTACCACGACCATTAAAGAATAGAACTTGAAGTTTAGATATAATATTTATATAGTAATAATGATAATAATAACATGACAATAATTATTATAATAATTCTTTTTAGAAAAAGTTAAACAGGGTAGGGGCATGGAATACACTCCTTGTCCCCGTCCTCGTTTAGCTTTTGAGAACTTTTTCCCCCATACTCTGCTTAAATGGAGAATCCTCACTTCATTAGGGGAGGGTCCCCACAAGAAAAATGGCAGCAACTCACTATTTTGAGAATTTTTCGTTTATGCGTGTCAACCTTCCGTAGGGGCCACACTAATCTTCTCCATATTGTTCCAATTTTATCGGATGTCCCCAAAGGGACTTGGGAACGTTTTATTAAAATGAGAAAAGGGGATAGAATTCTTAGCCAATTCATATGTTTTAAAATTTTGAAAATGATAAACATAAATGTTATCAAATAATTTTTACAAAACTAAGTTGGAATTTGTTGTTAGGTTTTTTAATTTTTTTTTTAAAGTAATGTAGATATCAACTAATTTGAATTGGGTTTCTTCAACAGAAGTTTTCAAAATATTATACAAGATACGAAATAGAGCAAAACCAGATAGGGTTTTAAAATTCCCTAGCTGAGGTAATTGCTCTCTGTTTGATTGTTGCAGAAAAGTAATGGACTTTTCTGGATAACTACTCTCTTGTCAATAGATGTTAAATAAATTCTGTTCAATTCCAATCAGAAGTAATGTGGCTAATGTAGTGATTATTGGCCAATAAGCTTGGGATAGTTTAGAAGTACTGCCTCAGATAAAACTCAACTAGCTTTTTGGAAGGGGAAGAGAAATAACAACTTTTAGATGCCCTCCACGTTATTAATGAACGTGTAAAGAACTAGAAGAGAAGGGATAAGGAGGTTAGTACCTTGATGGAAATTTGAGTTATGCAGAGAAAAGGTTTCGAACATATGCGGAGGTTATATATTATTGACTTTACTCTTTTTACAAAAGATGGATATGTTAGTACTAGAGGTTCTAGATATAAGATGGATGCTTATGAAAAATCCTCTTATTTTTGACCTTGTGGCTGATCTTTTTAGTTGAATTAGGACCAAGTATATGATGTGCTTTATATACCACTACAGAGGAAGAATGTGCTAATTGGGAGTTAATGTGAGGAAAATTTCAGAAGAATTAACATATTGAATGGAACAACCTAGAGGAGTTTTGTGGATTGTTGTACTAGGTCATGAATAAGAAAAGCATCTATAATTATCTTTGTATCCCTTTTGATGGACACCCTACTTTCTCTGTATTTTGGGAATGTGTTATAGAGTGAGTATTTGCCTGATGAAATAAATGGAAGAAGGCTTGGATTTTCTAGGGAGTGGAGAATATCCCTAGAGCCCAATTAGTGTCTTCAAAACGTCTCATCTGTTATTCATCTCTCCAAATTTATAGCTGGATGACATGAGAAGATGGACAAGATTTCTTATTACGACTATTGTGATAACCATGAATGTTTTGGCTAGCTTCCAAGCACCTTGTTTTTTCCTGCAAGGTAATGCTCAAATGTCTATAATGGCTTTCAAAACTCATTATGTAGCTTGAACTCTTGACTTTCAAAAGCGTCTTGCCTTTCAGCCGGACCTCATTCATGGGTATTAATTAGCATTCAGAAAAGATAATAAGAGACTTGTATGGGATGGGGTAATTTTGGTTACGAAGGCAACTGTTTTACTAATAAAAAATGAGCTGTCCTCATCAACAAATGGATTTAGATGGCCGTGCTACAAAAGGAAGTTCTTTGGAAAGATATAATGGAAGTATTTGCAGATAATTTCTGTGATAAATGAAACCTGTGCCCATTACCTAGTAGTCGGCTGCCTCATGTTTCGTAATGAATCAGTTACTGTTAATTGATCAGTTTGGTGGATTGATTTTTCTTTTTTTTGTCGCAAGCATATGTTTACAAAAATTAGTATCTTTGAGACTACGAGAAAAGTGTTTCCTCTAGAAGACATTCCCAGTGACCAAGACAGACGTGTTGTAATTATTTGATAGGTCCTATTTTACTTTATTAGAGCCTCTCCCTTTGCTTAGGCTCTATTTTGTTTTGTTCTTTTTTTGTTTTTTTCCTTTTTGTATGTGTCCTTCTACTCTTTCATTTTTTCGATGGAAGTTCAGTTCATTACAGGGGAAGGAAAAAGAAAAGGAAAAAATCTCCTGGCAATGGAAGTTGATTTTATTTTCTTCATGAGTACCGCCCCTAATCACCCCCCCCCCCCCCACCCCCACAATGACCTTACTAATAATAAATTAAATTGCATTGCAGGATCATAGTTTTTTAGGAGCTCAGGCAGACAAGGGCGGAAATGTAGACTAAGCTGAAGTGTATAAATTTTTTAGCAATTGGTTATGGTTAACCTAGCTGACGAAGGAGAATGATTTCAATTCTTTTTTAGATAGAATCGGCTGGAAACTTTTGCTCTCACCGGAGAGACGACGAGGTCTATTGCACGAGTTGATGCCGATACTCAAATATCTCTAGTCATGGCTCTTCCTTACACACCTTGCTGCTTATTGGAGTTAAGATTACAATTTTGGTCACTGAAGTAGGAAAAGTAGTGTGAATAGTCAGTATCTCATCAAAGTGATTTTTAATTGGACTATCCCTTTGCTCAAACCACTCAAGTGCATGAGCCAAATTGGACAGTGTAATTGTAACAAGATTTGTACCCTTCATTTGCTTGAATTGATTTCATTGGAAACTCACTTACTTTGTTCCTATTATTCCTTGATTCTGTTTGAAATAATTCTTAATCATAAGCCTTGAC

mRNA sequence

CTCGGCTTCTCCCTCCCTTTTTTCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCATCCACAATTCGCCCTCAATCTCCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTAATCTCTTTAATCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAGTTACGGCGACGGAGATGAGGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATTTTCCAGAGTATTCCTGTTGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGGCGGAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGAGGAGGAGATCGTAATGGATCATAGTTTTTTAGGAGCTCAGGCAGACAAGGGCGGAAATGTAGACTAAGCTGAAGTGTATAAATTTTTTAGCAATTGGTTATGGTTAACCTAGCTGACGAAGGAGAATGATTTCAATTCTTTTTTAGATAGAATCGGCTGGAAACTTTTGCTCTCACCGGAGAGACGACGAGGTCTATTGCACGAGTTGATGCCGATACTCAAATATCTCTAGTCATGGCTCTTCCTTACACACCTTGCTGCTTATTGGAGTTAAGATTACAATTTTGGTCACTGAAGTAGGAAAAGTAGTGTGAATAGTCAGTATCTCATCAAAGTGATTTTTAATTGGACTATCCCTTTGCTCAAACCACTCAAGTGCATGAGCCAAATTGGACAGTGTAATTGTAACAAGATTTGTACCCTTCATTTGCTTGAATTGATTTCATTGGAAACTCACTTACTTTGTTCCTATTATTCCTTGATTCTGTTTGAAATAATTCTTAATCATAAGCCTTGAC

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCATCCACAATTCGCCCTCAATCTCCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTAATCTCTTTAATCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAGTTACGGCGACGGAGATGAGGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATTTTCCAGAGTATTCCTGTTGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGGCGGAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGAGGAGGAGATCGTAATGGATCATAGTTTTTTAGGAGCTCAGGCAGACAAGGGCGGAAATGTAGACTAA

Protein sequence

MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQLFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAEEEIVMDHSFLGAQADKGGNVD
Homology
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BLAST of PI0003389 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.5e-17
Identity = 80/176 (45.45%), Postives = 100/176 (56.82%), Query Frame = 0 

Query: 20  LPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQLFVGDSHCAVNDSYGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match: A0A1S3BC64 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 225/234 (96.15%), Postives = 229/234 (97.86%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPA-AAAEEEIVMDHSFLGAQADKGGNVD 234
           RPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEEIVMDHS LGAQAD+GGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 234

[Close]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match: A0A0A0LPH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.5e-106
Identity = 210/219 (95.89%), Postives = 213/219 (97.26%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAAEEEIVM 218
           RPRKDSNRF QSNGNAAPEFKSGCDKP  AAAA+EEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match: A0A5A7VH26 (Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004810 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106
Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPA-AAAEEEIVM 218
           RPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match: A0A1S3BAU3 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106
Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPA-AAAEEEIVM 218
           RPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match: A0A6J1BV99 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.7e-92
Identity = 188/224 (83.93%), Postives = 201/224 (89.73%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMV S SN+S+RMN LPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN++DDVLIP
Sbjct: 1   MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS IRPQSP+RLD ESA+I+ LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC V++SYGD DEDLVL+NH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRRG
Sbjct: 121 LFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAEEEIVMDHSFLGA 225
           RPRKDSNRF QSNGNA P  KSGC+K   A EEEIVMD S LGA
Sbjct: 181 RPRKDSNRFPQSNGNAVPNSKSGCEK--RAEEEEIVMDLSSLGA 220

[Close]
BLAST of PI0003389 vs. NCBI nr
Match: XP_004152634.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 224/235 (95.32%), Postives = 228/235 (97.02%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAAEEEIVMDHSFLGAQADKGGNVD 234
           RPRKDSNRF QSNGNAAPEFKSGCDKP  AAAA+EEIVMDHS LGAQAD+GGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMDHSSLGAQADEGGNVD 235

[Close]
BLAST of PI0003389 vs. NCBI nr
Match: XP_008444842.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 3.0e-114
Identity = 225/234 (96.15%), Postives = 229/234 (97.86%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPA-AAAEEEIVMDHSFLGAQADKGGNVD 234
           RPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEEIVMDHS LGAQAD+GGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 234

[Close]
BLAST of PI0003389 vs. NCBI nr
Match: XP_038885025.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 214/229 (93.45%), Postives = 217/229 (94.76%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRF-SSSSSSSSTSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSELYCLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFN 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120

Query: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
           QLFVGD HCAVNDSYGDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAA----EEEIVMDHSFLGA 225
           GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAA    EEEIVMDHS LGA
Sbjct: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMDHSSLGA 229

[Close]
BLAST of PI0003389 vs. NCBI nr
Match: XP_004152635.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN62697.1 hypothetical protein Csa_022593 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 5.1e-106
Identity = 210/219 (95.89%), Postives = 213/219 (97.26%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAAEEEIVM 218
           RPRKDSNRF QSNGNAAPEFKSGCDKP  AAAA+EEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]
BLAST of PI0003389 vs. NCBI nr
Match: XP_008444843.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo] >KAA0065145.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 8.7e-106
Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0 

Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV+LFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFAQSNGNAAPEFKSGCDKPA-AAAEEEIVM 218
           RPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]
BLAST of PI0003389 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-18
Identity = 80/176 (45.45%), Postives = 100/176 (56.82%), Query Frame = 0 

Query: 20  LPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVNLFNQLFVGDSHCAVNDSYGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

The following BLAST results are available for this feature:
BLAST of PI0003389 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LME63.5e-1745.45Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of PI0003389 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BC641.4e-11496.15methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=365... [more]
A0A0A0LPH82.5e-10695.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1[more]
A0A5A7VH264.2e-10696.79Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. m... [more]
A0A1S3BAU34.2e-10696.79methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=365... [more]
A0A6J1BV992.7e-9283.93methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Momordica charantia... [more]
BLAST of PI0003389 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152634.11.7e-11495.32methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus][more]
XP_008444842.13.0e-11496.15PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis me... [more]
XP_038885025.11.8e-10693.45methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida][more]
XP_004152635.15.1e-10695.89methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN... [more]
XP_008444843.18.7e-10696.79PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me... [more]
BLAST of PI0003389 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22310.22.5e-1845.45methyl-CPG-binding domain 8 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..107
NoneNo IPR availablePANTHERPTHR37701:SF1METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8coord: 5..193
IPR037472Methyl-CpG-binding domain-containing protein 8PANTHERPTHR37701METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8coord: 5..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003389.1PI0003389.1mRNA