PI0003116 (gene) Melon (PI 482460) v1

Overview
NamePI0003116
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 314146 .. 314739 (+)
RNA-Seq ExpressionPI0003116
SyntenyPI0003116
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAGATATAATTTTGTCGAGAAAATTCATCAGGACCTCGGGGAGGGAAGGAAAGAAAACCACCGCCGATGTAAACAATCACAATGGCCAAGTTCTTATATGTTTTTAAGAACATACCATTTTTTTTCATTTGATATTCCATGTAGGTAGAGTCATTGATGGATACAATCTGAAGAGGAGACAAGAAAGAAGGCAGAAGACCTCTCTGCTTGGGTTTTGACCCGGCGCAGGGGTTTAACAGTCTCATACAAGAAGAGAATCGAAATCAAGAAGATTCTGATATCTTTTCAGGTGAATGTAGAAGTTTGCAACAAATGTTTTAGAACAATGTTATTGGCTAACAAACATAACGAACCTGATACTGAACAATCGCTATGCTATCCTTCCATGACATTGGATGGGAAACATCAAAAGCATCCACCCAACTGCGTTGTTACAAAAACAAAAGAAAATAGAAAAATCATGGGGTTTGAAAAGCTCAAATGCTTTGTGTATGTTTATGCACATAAAACTAGGATCAACCTATCGGAACAAACATCAGTCCTAAGTCCTTTCAATAGCATATTACTGTTTTTGGATTCCTATTTTTGA

mRNA sequence

ATGCCAAGATATAATTTTGTCGAGAAAATTCATCAGGACCTCGGGGAGGGAAGGAAAGAAAACCACCGCCGATGTAAACAATCACAATGGCCAAAGGAGACAAGAAAGAAGGCAGAAGACCTCTCTGCTTGGGTTTTGACCCGGCGCAGGGGTTTAACAGTCTCATACAAGAAGAGAATCGAAATCAAGAAGATTCTGATATCTTTTCAGGTGAATGTAGAAGTTTGCAACAAATGTTTTAGAACAATGTTATTGGCTAACAAACATAACGAACCTGATACTGAACAATCGCTATGCTATCCTTCCATGACATTGGATGGGAAACATCAAAAGCATCCACCCAACTGCGTTGTTACAAAAACAAAAGAAAATAGAAAAATCATGGGGTTTGAAAAGCTCAAATGCTTTGTGTATGTTTATGCACATAAAACTAGGATCAACCTATCGGAACAAACATCAGTCCTAAGTCCTTTCAATAGCATATTACTGTTTTTGGATTCCTATTTTTGA

Coding sequence (CDS)

ATGCCAAGATATAATTTTGTCGAGAAAATTCATCAGGACCTCGGGGAGGGAAGGAAAGAAAACCACCGCCGATGTAAACAATCACAATGGCCAAAGGAGACAAGAAAGAAGGCAGAAGACCTCTCTGCTTGGGTTTTGACCCGGCGCAGGGGTTTAACAGTCTCATACAAGAAGAGAATCGAAATCAAGAAGATTCTGATATCTTTTCAGGTGAATGTAGAAGTTTGCAACAAATGTTTTAGAACAATGTTATTGGCTAACAAACATAACGAACCTGATACTGAACAATCGCTATGCTATCCTTCCATGACATTGGATGGGAAACATCAAAAGCATCCACCCAACTGCGTTGTTACAAAAACAAAAGAAAATAGAAAAATCATGGGGTTTGAAAAGCTCAAATGCTTTGTGTATGTTTATGCACATAAAACTAGGATCAACCTATCGGAACAAACATCAGTCCTAAGTCCTTTCAATAGCATATTACTGTTTTTGGATTCCTATTTTTGA

Protein sequence

MPRYNFVEKIHQDLGEGRKENHRRCKQSQWPKETRKKAEDLSAWVLTRRRGLTVSYKKRIEIKKILISFQVNVEVCNKCFRTMLLANKHNEPDTEQSLCYPSMTLDGKHQKHPPNCVVTKTKENRKIMGFEKLKCFVYVYAHKTRINLSEQTSVLSPFNSILLFLDSYF
Homology
[Close]
BLAST of PI0003116 vs. ExPASy TrEMBL
Match: A0A0A0KLX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139470 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.8e-56
Identity = 120/156 (76.92%), Postives = 126/156 (80.77%), Query Frame = 0 

Query: 1   MPRYNFVEKIHQDLGEGRKENHRRCKQSQWPKETRKKAEDLSAWVLTRRRGLTVSYKKRI 60
           M R NFVE+I QDL EGRK N          +ETRKK EDLSAWV T+ RGLTVSYKKR 
Sbjct: 1   MARENFVEEIRQDLREGRKRNTPDINNHN-GQETRKKVEDLSAWVSTQCRGLTVSYKKRF 60

Query: 61  EIKKILISFQVNVEVCNKCFRTMLLANKHNEPDTEQSLCYPSMTLDGKHQKHPPNCVVTK 120
           EIK ILISFQVN EVCNKCFRT+LLANK NEPDTEQ   YPSMTLDGKHQKHPPNCVVTK
Sbjct: 61  EIKMILISFQVNAEVCNKCFRTVLLANKDNEPDTEQLRRYPSMTLDGKHQKHPPNCVVTK 120

Query: 121 TKENRKIMGFEKLKCFVYVYAHKTRINLSEQTSVLS 157
           TKENRKIMGFEK K FVYVY H+  INLSEQTSVL+
Sbjct: 121 TKENRKIMGFEKHKYFVYVYGHEAMINLSEQTSVLN 155

[Close]
BLAST of PI0003116 vs. NCBI nr
Match: KGN49869.1 (hypothetical protein Csa_000070 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 7.8e-56
Identity = 120/156 (76.92%), Postives = 126/156 (80.77%), Query Frame = 0 

Query: 1   MPRYNFVEKIHQDLGEGRKENHRRCKQSQWPKETRKKAEDLSAWVLTRRRGLTVSYKKRI 60
           M R NFVE+I QDL EGRK N          +ETRKK EDLSAWV T+ RGLTVSYKKR 
Sbjct: 1   MARENFVEEIRQDLREGRKRNTPDINNHN-GQETRKKVEDLSAWVSTQCRGLTVSYKKRF 60

Query: 61  EIKKILISFQVNVEVCNKCFRTMLLANKHNEPDTEQSLCYPSMTLDGKHQKHPPNCVVTK 120
           EIK ILISFQVN EVCNKCFRT+LLANK NEPDTEQ   YPSMTLDGKHQKHPPNCVVTK
Sbjct: 61  EIKMILISFQVNAEVCNKCFRTVLLANKDNEPDTEQLRRYPSMTLDGKHQKHPPNCVVTK 120

Query: 121 TKENRKIMGFEKLKCFVYVYAHKTRINLSEQTSVLS 157
           TKENRKIMGFEK K FVYVY H+  INLSEQTSVL+
Sbjct: 121 TKENRKIMGFEKHKYFVYVYGHEAMINLSEQTSVLN 155

The following BLAST results are available for this feature:
BLAST of PI0003116 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003116 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLX73.8e-5676.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139470 PE=4 SV=1[more]
BLAST of PI0003116 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49869.17.8e-5676.92hypothetical protein Csa_000070 [Cucumis sativus][more]
BLAST of PI0003116 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003116.1PI0003116.1mRNA