PI0003084 (gene) Melon (PI 482460) v1

Overview
NamePI0003084
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 9162766 .. 9163017 (-)
RNA-Seq ExpressionPI0003084
SyntenyPI0003084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAAAGGAGTAAAAAGAAGAAATGGGTTCCGAAGATTTTGAGCGAAGAACTCGCCGTGAGAGATTTGGAGAGAGAGAGAGAGATGGGATTTGAGAAGACGAAAATGGCGAATGAGAGCGAATACGTGGGCTTGGGGCCAAAATTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCAATGCCAACGACGTCGTTTTTGCCTTTTCTCTTCAACTATTACAAATATTAAAATTTAATTAA

mRNA sequence

ATGGGGAAAAGGAGTAAAAAGAAGAAATGGGTTCCGAAGATTTTGAGCGAAGAACTCGCCGTGAGAGATTTGGAGAGAGAGAGAGAGATGGGATTTGAGAAGACGAAAATGGCGAATGAGAGCGAATACGTGGGCTTGGGGCCAAAATTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCAATGCCAACGACGTCGTTTTTGCCTTTTCTCTTCAACTATTACAAATATTAAAATTTAATTAA

Coding sequence (CDS)

ATGGGGAAAAGGAGTAAAAAGAAGAAATGGGTTCCGAAGATTTTGAGCGAAGAACTCGCCGTGAGAGATTTGGAGAGAGAGAGAGAGATGGGATTTGAGAAGACGAAAATGGCGAATGAGAGCGAATACGTGGGCTTGGGGCCAAAATTTTTGCAGAGAGTCGAGGGAGTGGTTGAAAAGGACAATACCAATGCCAACGACGTCGTTTTTGCCTTTTCTCTTCAACTATTACAAATATTAAAATTTAATTAA

Protein sequence

MGKRSKKKKWVPKILSEELAVRDLEREREMGFEKTKMANESEYVGLGPKFLQRVEGVVEKDNTNANDVVFAFSLQLLQILKFN
Homology
[Close]
BLAST of PI0003084 vs. ExPASy TrEMBL
Match: A0A0A0LG43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829220 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 67/73 (91.78%), Postives = 67/73 (91.78%), Query Frame = 0 

Query: 2  GKRSKKKKWVPKILSEELAVRDLEREREMGFEKTKMANESEYVGLGPKFLQRVEGVVEKD 61
          GKRSKKKKWVPKILSEELAVRDL  EREMGFEKTKMANESEYVGLGP FLQRVEGVVEKD
Sbjct: 9  GKRSKKKKWVPKILSEELAVRDL--EREMGFEKTKMANESEYVGLGPNFLQRVEGVVEKD 68

Query: 62 NTNANDVVFAFSL 75
          NTN NDVV A SL
Sbjct: 69 NTNPNDVVLASSL 79

[Close]
BLAST of PI0003084 vs. NCBI nr
Match: KGN59779.2 (hypothetical protein Csa_002210, partial [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-24
Identity = 63/67 (94.03%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 2  GKRSKKKKWVPKILSEELAVRDLEREREMGFEKTKMANESEYVGLGPKFLQRVEGVVEKD 61
          GKRSKKKKWVPKILSEELAVRDL  EREMGFEKTKMANESEYVGLGP FLQRVEGVVEKD
Sbjct: 9  GKRSKKKKWVPKILSEELAVRDL--EREMGFEKTKMANESEYVGLGPNFLQRVEGVVEKD 68

Query: 62 NTNANDV 69
          NTN NDV
Sbjct: 69 NTNPNDV 73

The following BLAST results are available for this feature:
BLAST of PI0003084 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003084 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG432.6e-2691.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829220 PE=4 SV=1[more]
BLAST of PI0003084 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59779.22.3e-2494.03hypothetical protein Csa_002210, partial [Cucumis sativus][more]
BLAST of PI0003084 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003084.1PI0003084.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane