PI0002976 (gene) Melon (PI 482460) v1

Overview


Name	PI0002976
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposable element Tf2
Location	chr07: 11806560 .. 11807876 (+)
RNA-Seq Expression	PI0002976
Synteny	PI0002976

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCTACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTGCTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTACCTCGACTCACAACCTATGTGA

mRNA sequence

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCTACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTGCTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTACCTCGACTCACAACCTATGTGA

Coding sequence (CDS)

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCTACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTCAAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGCCCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAACCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTGCTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTACCTCGACTCACAACCTATGTGA

Protein sequence

MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPYLDSQPM

Homology

[Close]

BLAST of PI0002976 vs. ExPASy TrEMBL
Match: A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 3.2e-99
Identity = 195/420 (46.43%), Postives = 271/420 (64.52%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTIV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. ExPASy TrEMBL
Match: A0A5D3DW87 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 5.5e-99
Identity = 195/420 (46.43%), Postives = 271/420 (64.52%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. ExPASy TrEMBL
Match: A0A5A7U3G5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 200/439 (45.56%), Postives = 282/439 (64.24%), Query Frame = 0


Query: 12  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPS 71
           +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS
Sbjct: 38  TTPSKGK--PSTQSSAPSLMSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPS 97

Query: 72  ANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVV 131
             L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  +
Sbjct: 98  TALLRPSGPTTPNKRAASPTASSSRSAIPRNPSSYSQIVRP-KVFQPRPSINGYFTKTTM 157

Query: 132 IYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKN 191
           + D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKN
Sbjct: 158 V-DLTIEPEFDGPSVHEVCNQIFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKN 217

Query: 192 DSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNH 251
           D SKI YSKL+IF+ + P++W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NH
Sbjct: 218 DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNH 277

Query: 252 SWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC 311
           SWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Sbjct: 278 SWFMTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFA 337

Query: 312 LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDID 371
           LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ 
Sbjct: 338 LYFQIPWIFCWNFQLGPSENFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMT 397

Query: 372 QKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDEL 431
           ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+L
Sbjct: 398 RQEDEAFLLTKNAVMSTLAGASTQQEFNYVVNNVVVNRSDDNDDLPEDASPASVNDVDDL 457

Query: 432 ASPEY---DLNDPYLDSQP 438
               Y   D+NDP+LD+QP
Sbjct: 458 DYDPYEGLDINDPFLDTQP 472

[Close]

BLAST of PI0002976 vs. ExPASy TrEMBL
Match: A0A5A7SS94 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003480 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 194/420 (46.19%), Postives = 270/420 (64.29%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF    ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASLASVNDVDDLDYDPYEGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. ExPASy TrEMBL
Match: A0A5A7V6D1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00540 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 193/420 (45.95%), Postives = 270/420 (64.29%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  AASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N       + +S+   D+     Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNNADDFDYDPYEGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. NCBI nr
Match: KAA0032923.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 372.1 bits (954), Expect = 6.7e-99
Identity = 195/420 (46.43%), Postives = 271/420 (64.52%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTIV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. NCBI nr
Match: TYK28077.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-98
Identity = 195/420 (46.43%), Postives = 271/420 (64.52%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. NCBI nr
Match: KAA0050443.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 369.8 bits (948), Expect = 3.3e-98
Identity = 200/439 (45.56%), Postives = 282/439 (64.24%), Query Frame = 0


Query: 12  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPS 71
           +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS
Sbjct: 38  TTPSKGK--PSTQSSAPSLMSAENYAMDLQFEQVSRRHQGSAQRTLTIQSDSSSLPPIPS 97

Query: 72  ANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVV 131
             L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  +
Sbjct: 98  TALLRPSGPTTPNKRAASPTASSSRSAIPRNPSSYSQIVRP-KVFQPRPSINGYFTKTTM 157

Query: 132 IYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKN 191
           + D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKN
Sbjct: 158 V-DLTIEPEFDGPSVHEVCNQIFPHEFNFLPEDLTKTMTFYEYILVDSKSAEITHVPDKN 217

Query: 192 DSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNH 251
           D SKI YSKL+IF+ + P++W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NH
Sbjct: 218 DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNH 277

Query: 252 SWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC 311
           SWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Sbjct: 278 SWFMTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFA 337

Query: 312 LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDID 371
           LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ 
Sbjct: 338 LYFQIPWIFCWNFQLGPSENFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMT 397

Query: 372 QKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDEL 431
           ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+L
Sbjct: 398 RQEDEAFLLTKNAVMSTLAGASTQQEFNYVVNNVVVNRSDDNDDLPEDASPASVNDVDDL 457

Query: 432 ASPEY---DLNDPYLDSQP 438
               Y   D+NDP+LD+QP
Sbjct: 458 DYDPYEGLDINDPFLDTQP 472

[Close]

BLAST of PI0002976 vs. NCBI nr
Match: KAA0063832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-98
Identity = 193/420 (45.95%), Postives = 270/420 (64.29%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF K  ++ D  IEPE+   ++ E  
Sbjct: 61  AASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N       + +S+   D+     Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDVSPASVNNADDFDYDPYEGLDINDPFLDTQP 418

[Close]

BLAST of PI0002976 vs. NCBI nr
Match: KAA0032916.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-98
Identity = 194/420 (46.19%), Postives = 270/420 (64.29%), Query Frame = 0


Query: 31  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP 90
           MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASP 60

Query: 91  -LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETV 150
             S   S+ P  P++YSQ V P K F PRP I  YF    ++ D  IEPE+   ++ E  
Sbjct: 61  DASSSRSAIPRNPSSYSQIVRP-KIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVC 120

Query: 151 SRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPT 210
           S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P+
Sbjct: 121 SQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPS 180

Query: 211 HWNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWF 270
           +W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF
Sbjct: 181 YWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWF 240

Query: 271 IQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP 330
             WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Sbjct: 241 QNWWMYFGLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSG 300

Query: 331 QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALA 390
            +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA
Sbjct: 301 NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLA 360

Query: 391 QATTDADFQRLLSTAV------NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP 438
            A+T  +F  +++  V      N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Sbjct: 361 GASTQQEFNSVVNNVVVNLSDDNDDLPEDASLASVNDVDDLDYDPYEGLDINDPFLDTQP 418

The following BLAST results are available for this feature:

BLAST of PI0002976 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002976 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SR64	3.2e-99	46.43	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE...	[more]
A0A5D3DW87	5.5e-99	46.43	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 P...	[more]
A0A5A7U3G5	1.6e-98	45.56	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00490 PE...	[more]
A0A5A7SS94	2.1e-98	46.19	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7V6D1	2.1e-98	45.95	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of PI0002976 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032923.1	6.7e-99	46.43	polyprotein [Cucumis melo var. makuwa]	[more]
TYK28077.1	1.1e-98	46.43	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050443.1	3.3e-98	45.56	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063832.1	4.3e-98	45.95	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]
KAA0032916.1	4.3e-98	46.19	Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransp...	[more]

BLAST of PI0002976 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102
None	No IPR available	PANTHER	PTHR46249:SF31	BNAC08G47480D PROTEIN	coord: 112..429
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 112..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002976.1	PI0002976.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding