PI0002958 (gene) Melon (PI 482460) v1

Overview


Name	PI0002958
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Zf-CCHC domain-containing protein/UBN2 domain-containing protein
Location	chr08: 1229580 .. 1230122 (-)
RNA-Seq Expression	PI0002958
Synteny	PI0002958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGGAAGTGGAAGTGGAGTTGAAGAAATGGCACACCTTGGTCTAATGGCTCATAGTGACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAAATTTTGAAAGGATGCAAATGGCCTAGAAAAACTTAGTTCTAAGTATGTTGTGCTTAAGAAGAAATAAAATGTTTTAACTAGTGAAAATAAGTCTTTATTCGATAAAATTGCTTGCTTTAAAGAGCCTGAAAAATGTTGTGCAAATTGAAGAATTAAATGGCTCTTGTGATCAGCATGTTTGTGACTGTAATGAGAAAGATGCTTTGCTTGATAAAGTTAGATTTCTTGAGCATGATGGTTGTGAAAAAGATAACTTGATTAAAGTGCTTAAAGAAAATGAACTAAATGTTTTACCAGATCTTGATAAAGCTAAGGAGACTATTAAAAAGTTGACAATAGGTGCTCAAAGATTGGATAAAATTATTGAAATAGAAAAGTCTTAA

mRNA sequence

ATGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGGAAGTGGAAGTGGAGTTGAAGAAATGGCACACCTTGGTCTAATGGCTCATAGTGACAAAGAAGATGAACATGATGATGAGAGCCTGAAAAATGTTGTGCAAATTGAAGAATTAAATGGCTCTTGTGATCAGCATGTTTGTGACTGTAATGAGAAAGATGCTTTGCTTGATAAAGTTAGATTTCTTGAGCATGATGGTTGTGAAAAAGATAACTTGATTAAAGTGCTTAAAGAAAATGAACTAAATGTTTTACCAGATCTTGATAAAGCTAAGGAGACTATTAAAAAGTTGACAATAGGTGCTCAAAGATTGGATAAAATTATTGAAATAGAAAAGTCTTAA

Coding sequence (CDS)

ATGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGGAAGTGGAAGTGGAGTTGAAGAAATGGCACACCTTGGTCTAATGGCTCATAGTGACAAAGAAGATGAACATGATGATGAGAGCCTGAAAAATGTTGTGCAAATTGAAGAATTAAATGGCTCTTGTGATCAGCATGTTTGTGACTGTAATGAGAAAGATGCTTTGCTTGATAAAGTTAGATTTCTTGAGCATGATGGTTGTGAAAAAGATAACTTGATTAAAGTGCTTAAAGAAAATGAACTAAATGTTTTACCAGATCTTGATAAAGCTAAGGAGACTATTAAAAAGTTGACAATAGGTGCTCAAAGATTGGATAAAATTATTGAAATAGAAAAGTCTTAA

Protein sequence

MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVCDCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKIIEIEKS

Homology

[Close]

BLAST of PI0002958 vs. ExPASy TrEMBL
Match: A0A5A7U923 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00640 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 92/126 (73.02%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVC 60
           MKATWDDSS SE    S VE+M HLGLMAHS+KEDEHDDE++ +            +HVC
Sbjct: 142 MKATWDDSSVSE----SEVEKMVHLGLMAHSNKEDEHDDENVSS------------KHVC 201

Query: 61  DCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKI 120
           DCNEK+ALLDKVRFLEHD CEKDNLIKVLKENELNVL DLDKAKETIKKLTI AQRL +I
Sbjct: 202 DCNEKEALLDKVRFLEHDVCEKDNLIKVLKENELNVLQDLDKAKETIKKLTISAQRLGRI 251

Query: 121 IEIEKS 127
           IE+ KS
Sbjct: 262 IEVGKS 251

[Close]

BLAST of PI0002958 vs. ExPASy TrEMBL
Match: A0A5A7TRZ7 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1333G00310 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.5e-38
Identity = 106/179 (59.22%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDE-------------------- 60
           MKATWDDSSESE    S VEE A+LGLM  SDKEDEHDDE                    
Sbjct: 145 MKATWDDSSESE----SEVEETANLGLMVQSDKEDEHDDEVTLEPPSIEELFENFENVQN 204

Query: 61  -----SLKNVV----------------------------QIEELNGSCDQHVCDCNEKDA 120
                S K VV                            QIEELN S D+H+ DCNEKDA
Sbjct: 205 DLEKLSSKYVVLKKKYNVLSSENKSLLDKIACFKENVNKQIEELNVSSDKHIGDCNEKDA 264

Query: 121 LLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKIIEIEKS 127
           LLDKVRFLEHD CEKDNLIKVLKENELNVL DLDKAKETIKKLTIGAQRLDKIIE+ KS
Sbjct: 265 LLDKVRFLEHDSCEKDNLIKVLKENELNVLQDLDKAKETIKKLTIGAQRLDKIIEVGKS 319

[Close]

BLAST of PI0002958 vs. ExPASy TrEMBL
Match: A0A5D3DLU8 (UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00500 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37
Identity = 96/148 (64.86%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEH------------DDESL------ 60
           MKATWDDSSE    SG  VE+MA+LGLMAH     E+            +++SL      
Sbjct: 247 MKATWDDSSE----SGDEVEKMAYLGLMAHKKLSSEYVVLKKKYNVLTSENKSLLHKHAC 306

Query: 61  ----KNVVQIEELNGSCDQHVCDCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLP 120
               +NVVQIEELN S D+HVCDCNEKDALLDKVRFL+HDGCEKDNLIKVLKENELNVL 
Sbjct: 307 FKENENVVQIEELNVSSDKHVCDCNEKDALLDKVRFLKHDGCEKDNLIKVLKENELNVLQ 366

Query: 121 DLDKAKETIKKLTIGAQRLDKIIEIEKS 127
           DL+KAKETI+KLTI A+RLDKII + KS
Sbjct: 367 DLNKAKETIEKLTINARRLDKIIGVGKS 390

[Close]

BLAST of PI0002958 vs. ExPASy TrEMBL
Match: A0A5A7UFI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00500 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.8e-33
Identity = 86/123 (69.92%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVC 60
           MKA WDDSS+SE    S VEEMA+LGLMAHSDKEDEHDD                     
Sbjct: 65  MKAIWDDSSKSE----SEVEEMANLGLMAHSDKEDEHDD--------------------- 124

Query: 61  DCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKI 120
              EKDALLDKVRFL+HD CEKDNLIK+LKENELNVL DLDKAKETIKKLTIGAQRLDKI
Sbjct: 125 ---EKDALLDKVRFLKHDSCEKDNLIKMLKENELNVLQDLDKAKETIKKLTIGAQRLDKI 159

Query: 121 IEI 124
           IE+
Sbjct: 185 IEV 159

[Close]

BLAST of PI0002958 vs. ExPASy TrEMBL
Match: A0A5D3BT46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00110 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32
Identity = 85/123 (69.11%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVC 60
           MKA WDDSS+SE    S VEEMA+LGL+AHSDKEDEHDD                     
Sbjct: 65  MKAIWDDSSKSE----SEVEEMANLGLIAHSDKEDEHDD--------------------- 124

Query: 61  DCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKI 120
              EKDALLDKVRFL+HD CEKDNLIK+LKENELNVL DLDKAKETIKKLTIGAQRLDKI
Sbjct: 125 ---EKDALLDKVRFLKHDSCEKDNLIKMLKENELNVLQDLDKAKETIKKLTIGAQRLDKI 159

Query: 121 IEI 124
           IE+
Sbjct: 185 IEV 159

[Close]

BLAST of PI0002958 vs. NCBI nr
Match: KAA0051650.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYJ97960.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 5.5e-38
Identity = 92/126 (73.02%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVC 60
           MKATWDDSS SE    S VE+M HLGLMAHS+KEDEHDDE++ +            +HVC
Sbjct: 142 MKATWDDSSVSE----SEVEKMVHLGLMAHSNKEDEHDDENVSS------------KHVC 201

Query: 61  DCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKI 120
           DCNEK+ALLDKVRFLEHD CEKDNLIKVLKENELNVL DLDKAKETIKKLTI AQRL +I
Sbjct: 202 DCNEKEALLDKVRFLEHDVCEKDNLIKVLKENELNVLQDLDKAKETIKKLTISAQRLGRI 251

Query: 121 IEIEKS 127
           IE+ KS
Sbjct: 262 IEVGKS 251

[Close]

BLAST of PI0002958 vs. NCBI nr
Match: KAA0046182.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYK00208.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 9.4e-38
Identity = 106/179 (59.22%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDE-------------------- 60
           MKATWDDSSESE    S VEE A+LGLM  SDKEDEHDDE                    
Sbjct: 145 MKATWDDSSESE----SEVEETANLGLMVQSDKEDEHDDEVTLEPPSIEELFENFENVQN 204

Query: 61  -----SLKNVV----------------------------QIEELNGSCDQHVCDCNEKDA 120
                S K VV                            QIEELN S D+H+ DCNEKDA
Sbjct: 205 DLEKLSSKYVVLKKKYNVLSSENKSLLDKIACFKENVNKQIEELNVSSDKHIGDCNEKDA 264

Query: 121 LLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKIIEIEKS 127
           LLDKVRFLEHD CEKDNLIKVLKENELNVL DLDKAKETIKKLTIGAQRLDKIIE+ KS
Sbjct: 265 LLDKVRFLEHDSCEKDNLIKVLKENELNVLQDLDKAKETIKKLTIGAQRLDKIIEVGKS 319

[Close]

BLAST of PI0002958 vs. NCBI nr
Match: TYK24240.1 (UBN2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 4.6e-37
Identity = 96/148 (64.86%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEH------------DDESL------ 60
           MKATWDDSSE    SG  VE+MA+LGLMAH     E+            +++SL      
Sbjct: 247 MKATWDDSSE----SGDEVEKMAYLGLMAHKKLSSEYVVLKKKYNVLTSENKSLLHKHAC 306

Query: 61  ----KNVVQIEELNGSCDQHVCDCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLP 120
               +NVVQIEELN S D+HVCDCNEKDALLDKVRFL+HDGCEKDNLIKVLKENELNVL 
Sbjct: 307 FKENENVVQIEELNVSSDKHVCDCNEKDALLDKVRFLKHDGCEKDNLIKVLKENELNVLQ 366

Query: 121 DLDKAKETIKKLTIGAQRLDKIIEIEKS 127
           DL+KAKETI+KLTI A+RLDKII + KS
Sbjct: 367 DLNKAKETIEKLTINARRLDKIIGVGKS 390

[Close]

BLAST of PI0002958 vs. NCBI nr
Match: XP_031741720.1 (uncharacterized protein LOC116403915 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 103/180 (57.22%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDD----------------ESLKN 60
           MKATWDDSSESE    S VEEMA+LGLMAHSDK+DEHDD                ES++N
Sbjct: 319 MKATWDDSSESE----SEVEEMANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQN 378

Query: 61  VV--------------------------------------QIEELNGSCDQHVCDCNEKD 120
            +                                      QIEELN S D+HV  C EKD
Sbjct: 379 DLEKLSSKYVVLKKKYNVLISENKSLLDTIACFKENENFEQIEELNVSSDKHV--CIEKD 438

Query: 121 ALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKIIEIEKS 127
           ALLDKVRFLEHD CEKDNLIKVLKENEL+VL +LDKAKETIKKLTIGAQRLDKIIE+ KS
Sbjct: 439 ALLDKVRFLEHDSCEKDNLIKVLKENELSVLQELDKAKETIKKLTIGAQRLDKIIEVGKS 492

[Close]

BLAST of PI0002958 vs. NCBI nr
Match: KAA0053257.1 (uncharacterized protein E6C27_scaffold102G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32
Identity = 86/123 (69.92%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MKATWDDSSESESGSGSGVEEMAHLGLMAHSDKEDEHDDESLKNVVQIEELNGSCDQHVC 60
           MKA WDDSS+SE    S VEEMA+LGLMAHSDKEDEHDD                     
Sbjct: 65  MKAIWDDSSKSE----SEVEEMANLGLMAHSDKEDEHDD--------------------- 124

Query: 61  DCNEKDALLDKVRFLEHDGCEKDNLIKVLKENELNVLPDLDKAKETIKKLTIGAQRLDKI 120
              EKDALLDKVRFL+HD CEKDNLIK+LKENELNVL DLDKAKETIKKLTIGAQRLDKI
Sbjct: 125 ---EKDALLDKVRFLKHDSCEKDNLIKMLKENELNVLQDLDKAKETIKKLTIGAQRLDKI 159

Query: 121 IEI 124
           IE+
Sbjct: 185 IEV 159

The following BLAST results are available for this feature:

BLAST of PI0002958 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U923	2.7e-38	73.02	Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo...	[more]
A0A5A7TRZ7	4.5e-38	59.22	Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo...	[more]
A0A5D3DLU8	2.2e-37	64.86	UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7UFI4	9.8e-33	69.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BT46	2.8e-32	69.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0002958 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051650.1	5.5e-38	73.02	zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v...	[more]
KAA0046182.1	9.4e-38	59.22	zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v...	[more]
TYK24240.1	4.6e-37	64.86	UBN2 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_031741720.1	2.0e-35	57.22	uncharacterized protein LOC116403915 [Cucumis sativus]	[more]
KAA0053257.1	2.0e-32	69.92	uncharacterized protein E6C27_scaffold102G00500 [Cucumis melo var. makuwa]	[more]

BLAST of PI0002958 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002958.1	PI0002958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding