PI0002927 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCAACTAAAATTATTCAAAGAAACTTCTAGGAATCTAAAAAGGAAATAAATCCCTCCCCCCTATAAATTCCCACTCTCCTTCCCCTTATTTTTCAGCAATTCCCTCATCAACAACCTCACTCAATTCAACAAATTCAATCAAACATGAATTCCATGTTCAGTTTATTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAATTTCGTTAGGGCTTCTTCCACTGTTCCTTCCTTCACTCCCAACAACGCCGCCTCCTCCTCCGCCTCTTCCGCCGTTGCGAAGCCGCTGCCCAGTAAGAAGGAAGAAGAAGCGAAATCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGCCTCAATTGCTTTGAAACTATCGTCCCCAATTGAGGTTTTCTGTCGAAATCAAGATTCAATTTAACTCATATTTTTTTCATTCTTTCTTTCAGTTTTAGGGCTTAAAAATTAGGTTATACGAAACTTGGGGATATTGAGAGAACTGGAATTGTGGTATAATACAGATTTGGATGGAATTAGATGATCGATTCTGTTCTACGCTGGAATTTGATATGAAATCCCATACTATATTCGTTGATTCA GCCAACTAAAATTATTCAAAGAAACTTCTAGGAATCTAAAAAGGAAATAAATCCCTCCCCCCTATAAATTCCCACTCTCCTTCCCCTTATTTTTCAGCAATTCCCTCATCAACAACCTCACTCAATTCAACAAATTCAATCAAACATGAATTCCATGTTCAGTTTATTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAATTTCGTTAGGGCTTCTTCCACTGTTCCTTCCTTCACTCCCAACAACGCCGCCTCCTCCTCCGCCTCTTCCGCCGTTGCGAAGCCGCTGCCCAGTAAGAAGGAAGAAGAAGCGAAATCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGCCTCAATTGCTTTGAAACTATCGTCCCCAATTGAGGTTTTCTGTCGAAATCAAGATTCAATTTAACTCATATTTTTTTCATTCTTTCTTTCAGTTTTAGGGCTTAAAAATTAGGTTATACGAAACTTGGGGATATTGAGAGAACTGGAATTGTGGTATAATACAGATTTGGATGGAATTAGATGATCGATTCTGTTCTACGCTGGAATTTGATATGAAATCCCATACTATATTCGTTGATTCA ATGAATTCCATGTTCAGTTTATTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAATTTCGTTAGGGCTTCTTCCACTGTTCCTTCCTTCACTCCCAACAACGCCGCCTCCTCCTCCGCCTCTTCCGCCGTTGCGAAGCCGCTGCCCAGTAAGAAGGAAGAAGAAGCGAAATCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGCCTCAATTGCTTTGAAACTATCGTCCCCAATTGA MNSMFSLFDAFAAEFLLGNFVRASSTVPSFTPNNAASSSASSAVAKPLPSKKEEEAKSKNSSVKPRFALELDGLNCFETIVPN Homology
BLAST of PI0002927 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27 Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of PI0002927 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27 Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of PI0002927 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 63/86 (73.26%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of PI0002927 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.2e-09 Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of PI0002927 vs. ExPASy TrEMBL
Match: A0A7G2DUN6 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS2783 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-06 Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of PI0002927 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27 Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of PI0002927 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 2.9e-27 Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of PI0002927 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.4 bits (285), Expect = 4.7e-22 Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of PI0002927 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.0 bits (284), Expect = 6.2e-22 Identity = 63/86 (73.26%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of PI0002927 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.0 bits (284), Expect = 6.2e-22 Identity = 63/86 (73.26%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of PI0002927 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 5.8e-10 Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of PI0002927 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 7.8e-07 Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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