PI0002805 (gene) Melon (PI 482460) v1

Overview
NamePI0002805
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr07: 19152698 .. 19153737 (-)
RNA-Seq ExpressionPI0002805
SyntenyPI0002805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATACTCGAAAGTGCAAATACAAGTCTCAGCATTCTTCTGAAGCCATTCCGCATGCCTCTGCCTCCAGGGACAATGCTTCTTCTCCTCATTCCAAAAGGCTCAAAATGATTCCCACAAGGCATCCGTTTGGAAGATCGGTTAACAAAGATAAGTCTTCTTTTTCTACTGCATTTAAACACTTCATGCATCAAAGTTCTGTTCAACAAAATCCTCTAAAACCCTTTGGTCCAAGAGCATTTAGTTTTTCTAATGATTCTGATTCTGATGAACAAGATCATATAAGTTTAGCAGACCTTGTTAGGAAATCCAAACAAAAAGGAAAACAATGTGTTGCTAATACATATCCTATTTCTGATAACCCTCCTCAAACTCAATCAAAAGAACCTGTCATCAATACTCATGTTGAGTCAAATAATTCGTCTGATAATGTTCCTTTTGAAAAATCTTCCACAAAACCAAATATCTCATCTGAGAATGTTAATCCTGTCTATGACGATGCCCCTAATTTATCAAATTCCATTCCTGAAGCATCAAATACTATCCCACAAACCACTCATCCTTCTTCTAAACAACCATCTGTTTTTCAGGCTAAGTCTTCTGCTCAAAATCCACCCCCATCTTCTACACCAGTTGATCCTAATCCTTCTAAACCACACTCTAAGTCTAAAGTTCCTAAAGTCAAAAATACTAATCTATCATCTAATGTCCCTAAAATCATCACGACTAAGGCAGGTAGACAAAAATTCCTCCAAATGTTCTTACAGTACCTATAGATGGAATTTCCTTCCACAATGAAGAAAATGTCCAAAAGTAAAAATGTGTTGTTAAAAGAAGGATTGCTGATGAACAAAATATCTCAAATAAACATCATTCTTGTATAGCTATAATGGATTTAATCATCAAAGCTGGTCTTGCAAAAACCGTCTCTCAAGTAAGACCTTTTTATCCTCGATTAATCAAAGAACTTATTGTTAATCTTCCATCTCAATTCAATGATCCAAGCAATCCTGATTATTATACAATTCATATATGA

mRNA sequence

ATGGTGAATACTCGAAAGTGCAAATACAAGTCTCAGCATTCTTCTGAAGCCATTCCGCATGCCTCTGCCTCCAGGGACAATGCTTCTTCTCCTCATTCCAAAAGGCTCAAAATGATTCCCACAAGGCATCCGTTTGGAAGATCGGTTAACAAAGATAAGTCTTCTTTTTCTACTGCATTTAAACACTTCATGCATCAAAGTTCTGTTCAACAAAATCCTCTAAAACCCTTTGGTCCAAGAGCATTTAGTTTTTCTAATGATTCTGATTCTGATGAACAAGATCATATAAGTTTAGCAGACCTTGTTAGGAAATCCAAACAAAAAGGAAAACAATGTGTTGCTAATACATATCCTATTTCTGATAACCCTCCTCAAACTCAATCAAAAGAACCTGTCATCAATACTCATGTTGAGTCAAATAATTCGTCTGATAATGTTCCTTTTGAAAAATCTTCCACAAAACCAAATATCTCATCTGAGAATGTTAATCCTGTCTATGACGATGCCCCTAATTTATCAAATTCCATTCCTGAAGCATCAAATACTATCCCACAAACCACTCATCCTTCTTCTAAACAACCATCTGTTTTTCAGGCTAAGTCTTCTGCTCAAAATCCACCCCCATCTTCTACACCAGTTGATCCTAATCCTTCTAAACCACACTCTAAGTCTAAAGTTCCTAAAGTCAAAAATACTAATCTATCATCTAATACAAAAATTCCTCCAAATGTTCTTACAGTACCTATAGATGGAATTTCCTTCCACAATGAAGAAAATGTCCAAAAACCTTTTTATCCTCGATTAATCAAAGAACTTATTGTTAATCTTCCATCTCAATTCAATGATCCAAGCAATCCTGATTATTATACAATTCATATATGA

Coding sequence (CDS)

ATGGTGAATACTCGAAAGTGCAAATACAAGTCTCAGCATTCTTCTGAAGCCATTCCGCATGCCTCTGCCTCCAGGGACAATGCTTCTTCTCCTCATTCCAAAAGGCTCAAAATGATTCCCACAAGGCATCCGTTTGGAAGATCGGTTAACAAAGATAAGTCTTCTTTTTCTACTGCATTTAAACACTTCATGCATCAAAGTTCTGTTCAACAAAATCCTCTAAAACCCTTTGGTCCAAGAGCATTTAGTTTTTCTAATGATTCTGATTCTGATGAACAAGATCATATAAGTTTAGCAGACCTTGTTAGGAAATCCAAACAAAAAGGAAAACAATGTGTTGCTAATACATATCCTATTTCTGATAACCCTCCTCAAACTCAATCAAAAGAACCTGTCATCAATACTCATGTTGAGTCAAATAATTCGTCTGATAATGTTCCTTTTGAAAAATCTTCCACAAAACCAAATATCTCATCTGAGAATGTTAATCCTGTCTATGACGATGCCCCTAATTTATCAAATTCCATTCCTGAAGCATCAAATACTATCCCACAAACCACTCATCCTTCTTCTAAACAACCATCTGTTTTTCAGGCTAAGTCTTCTGCTCAAAATCCACCCCCATCTTCTACACCAGTTGATCCTAATCCTTCTAAACCACACTCTAAGTCTAAAGTTCCTAAAGTCAAAAATACTAATCTATCATCTAATACAAAAATTCCTCCAAATGTTCTTACAGTACCTATAGATGGAATTTCCTTCCACAATGAAGAAAATGTCCAAAAACCTTTTTATCCTCGATTAATCAAAGAACTTATTGTTAATCTTCCATCTCAATTCAATGATCCAAGCAATCCTGATTATTATACAATTCATATATGA

Protein sequence

MVNTRKCKYKSQHSSEAIPHASASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQNPLKPFGPRAFSFSNDSDSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
Homology
BLAST of PI0002805 vs. ExPASy TrEMBL
Match: A0A5A7STQ8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001570 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.9e-12
Identity = 73/230 (31.74%), Postives = 102/230 (44.35%), Query Frame = 0

Query: 87  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKE 146
           D D D+ D +  A L++K+         Q G      ++ + P   N      P   S E
Sbjct: 506 DMDLDDLDDVPSARLLKKTTIPEHTSNVQPGPSMHSPLSESLPSESNVAHASVPCDVSAE 565

Query: 147 PVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPS 206
           P + T V +     + P       PNI SE V    D+ P    ++P AS  IP  + P+
Sbjct: 566 PEVRTDVRNKEDELDPP------NPNIHSEEVPAAADNNP----TVPHASPEIPIASQPA 625

Query: 207 SKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPID 266
            +                              KS+  +   T  ++  KIPPN+ +VPID
Sbjct: 626 KR------------------------------KSQQNRCNITTKTNRKKIPPNIPSVPID 685

Query: 267 GISFHNEEN-------VQKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
           GISFH+EEN       VQ+     LI+E IVNLP +FNDPS+PDY T+HI
Sbjct: 686 GISFHHEENVQRWKFLVQRRLADELIREFIVNLPDEFNDPSSPDYQTVHI 695

BLAST of PI0002805 vs. ExPASy TrEMBL
Match: A0A5A7URQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00030 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-11
Identity = 97/356 (27.25%), Postives = 140/356 (39.33%), Query Frame = 0

Query: 1   MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFS 60
           MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   +
Sbjct: 1   MVNTHKRSYVPKQSEDA-PNAITSSPSPVHHVKVKGRRFKSTPPRKRYRLPYEKVQGEAT 60

Query: 61  TAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSDSDEQDHISLADLVRKSKQKG 120
           +  +  +   +V +      P  P   ++       +D DSD QD++ L  L+ K     
Sbjct: 61  SKLQESLRSKAVSEVGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNK---PS 120

Query: 121 KQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDA 180
           K   A   P SD P    S+E      V      D          P ISS + + V+   
Sbjct: 121 KPVTAERLP-SDPPGSIHSQESSSTEGVFIPTPGD------PRRSPAISSGHSSSVHPSR 180

Query: 181 PNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSK 240
             L  S P+A+   P+                    PPP+  P+ P          +P  
Sbjct: 181 SKLHTSQPDATEIPPEDI------------------PPPTDDPIAPSSEGRQESLKSPKP 240

Query: 241 PHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------ 294
           P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Sbjct: 241 PKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISD 300

BLAST of PI0002805 vs. ExPASy TrEMBL
Match: A0A1S3CMY0 (uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-11
Identity = 97/356 (27.25%), Postives = 140/356 (39.33%), Query Frame = 0

Query: 1   MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFS 60
           MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   +
Sbjct: 1   MVNTHKGSYVPKQSEDA-PNAITSSPSPVHHVKVKGRRFKSTPPRKRYRLPYEKVQGEAT 60

Query: 61  TAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSDSDEQDHISLADLVRKSKQKG 120
           +  +  +   +V +      P  P   ++       +D DSD QD++ L  L+ K     
Sbjct: 61  SKLQESLRSKAVSEVGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNK---PS 120

Query: 121 KQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDA 180
           K   A   P SD P    S+E      V      D          P ISS + + V+   
Sbjct: 121 KPVTAERLP-SDPPGSIHSQESSSTEGVFIPTPGD------PRRSPAISSGHSSSVHPSR 180

Query: 181 PNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSK 240
             L  S P+A+   P+                    PPP+  P+ P          +P  
Sbjct: 181 SKLHTSQPDATEIPPEDI------------------PPPTDDPIAPSSEGRQESLKSPKP 240

Query: 241 PHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------ 294
           P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Sbjct: 241 PKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISD 300

BLAST of PI0002805 vs. ExPASy TrEMBL
Match: A0A5D3CC65 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00040 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-11
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 0

Query: 89  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV-- 148
           DSDEQD + LA L++K                 N   T+S  P+I+   + ++SS++V  
Sbjct: 161 DSDEQDDVPLARLLKKG-------------FVLNVASTKSVNPIISARSQESSSSEDVFI 220

Query: 149 ----PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPSSKQPSV---FQA 208
                +  S  +P   S++  P+ +D P +   I + +     T   +  +P V   FQ 
Sbjct: 221 PTPGLYHASDQEPG-PSQHSPPIRNDVPAVETPIDDENVDPTNTDATNIVEPDVHDDFQL 280

Query: 209 KSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEE 268
           +          T      S+P  K      +N T  +   KIP N+ +VPIDGISFH EE
Sbjct: 281 E----------TQQSSEVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGISFHLEE 340

Query: 269 NV---QKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
           N     + FY +LI++ IVNL S FNDPS+PDY T+HI
Sbjct: 341 NTISNVESFYSQLIRKFIVNLSSDFNDPSSPDYQTVHI 354

BLAST of PI0002805 vs. ExPASy TrEMBL
Match: A0A5D3DB71 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00320 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 212 PVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQK--------- 271
           P DP       + + PKV         KIP N+ +VPI+GISFH EENVQ+         
Sbjct: 301 PDDPIAPSTEGRPESPKVS----EPPKKIPANIPSVPINGISFHYEENVQRWKASLEKTI 360

Query: 272 ----PFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
               PFYP+ I+E IVN+P +FN+PS+PDY T+HI
Sbjct: 361 SNVSPFYPQPIREFIVNMPDEFNNPSSPDYQTVHI 391

BLAST of PI0002805 vs. NCBI nr
Match: KAA0032911.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-11
Identity = 73/230 (31.74%), Postives = 102/230 (44.35%), Query Frame = 0

Query: 87  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKE 146
           D D D+ D +  A L++K+         Q G      ++ + P   N      P   S E
Sbjct: 506 DMDLDDLDDVPSARLLKKTTIPEHTSNVQPGPSMHSPLSESLPSESNVAHASVPCDVSAE 565

Query: 147 PVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPS 206
           P + T V +     + P       PNI SE V    D+ P    ++P AS  IP  + P+
Sbjct: 566 PEVRTDVRNKEDELDPP------NPNIHSEEVPAAADNNP----TVPHASPEIPIASQPA 625

Query: 207 SKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPID 266
            +                              KS+  +   T  ++  KIPPN+ +VPID
Sbjct: 626 KR------------------------------KSQQNRCNITTKTNRKKIPPNIPSVPID 685

Query: 267 GISFHNEEN-------VQKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
           GISFH+EEN       VQ+     LI+E IVNLP +FNDPS+PDY T+HI
Sbjct: 686 GISFHHEENVQRWKFLVQRRLADELIREFIVNLPDEFNDPSSPDYQTVHI 695

BLAST of PI0002805 vs. NCBI nr
Match: KAA0056211.1 (uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 7.8e-11
Identity = 97/356 (27.25%), Postives = 140/356 (39.33%), Query Frame = 0

Query: 1   MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFS 60
           MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   +
Sbjct: 1   MVNTHKRSYVPKQSEDA-PNAITSSPSPVHHVKVKGRRFKSTPPRKRYRLPYEKVQGEAT 60

Query: 61  TAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSDSDEQDHISLADLVRKSKQKG 120
           +  +  +   +V +      P  P   ++       +D DSD QD++ L  L+ K     
Sbjct: 61  SKLQESLRSKAVSEVGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNK---PS 120

Query: 121 KQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDA 180
           K   A   P SD P    S+E      V      D          P ISS + + V+   
Sbjct: 121 KPVTAERLP-SDPPGSIHSQESSSTEGVFIPTPGD------PRRSPAISSGHSSSVHPSR 180

Query: 181 PNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSK 240
             L  S P+A+   P+                    PPP+  P+ P          +P  
Sbjct: 181 SKLHTSQPDATEIPPEDI------------------PPPTDDPIAPSSEGRQESLKSPKP 240

Query: 241 PHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------ 294
           P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Sbjct: 241 PKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISD 300

BLAST of PI0002805 vs. NCBI nr
Match: XP_008465030.1 (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 7.8e-11
Identity = 97/356 (27.25%), Postives = 140/356 (39.33%), Query Frame = 0

Query: 1   MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFS 60
           MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   +
Sbjct: 1   MVNTHKGSYVPKQSEDA-PNAITSSPSPVHHVKVKGRRFKSTPPRKRYRLPYEKVQGEAT 60

Query: 61  TAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSDSDEQDHISLADLVRKSKQKG 120
           +  +  +   +V +      P  P   ++       +D DSD QD++ L  L+ K     
Sbjct: 61  SKLQESLRSKAVSEVGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNK---PS 120

Query: 121 KQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDA 180
           K   A   P SD P    S+E      V      D          P ISS + + V+   
Sbjct: 121 KPVTAERLP-SDPPGSIHSQESSSTEGVFIPTPGD------PRRSPAISSGHSSSVHPSR 180

Query: 181 PNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSK 240
             L  S P+A+   P+                    PPP+  P+ P          +P  
Sbjct: 181 SKLHTSQPDATEIPPEDI------------------PPPTDDPIAPSSEGRQESLKSPKP 240

Query: 241 PHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------ 294
           P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Sbjct: 241 PKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISD 300

BLAST of PI0002805 vs. NCBI nr
Match: TYK08882.1 (uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 0

Query: 89  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV-- 148
           DSDEQD + LA L++K                 N   T+S  P+I+   + ++SS++V  
Sbjct: 161 DSDEQDDVPLARLLKKG-------------FVLNVASTKSVNPIISARSQESSSSEDVFI 220

Query: 149 ----PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPSSKQPSV---FQA 208
                +  S  +P   S++  P+ +D P +   I + +     T   +  +P V   FQ 
Sbjct: 221 PTPGLYHASDQEPG-PSQHSPPIRNDVPAVETPIDDENVDPTNTDATNIVEPDVHDDFQL 280

Query: 209 KSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEE 268
           +          T      S+P  K      +N T  +   KIP N+ +VPIDGISFH EE
Sbjct: 281 E----------TQQSSEVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGISFHLEE 340

Query: 269 NV---QKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
           N     + FY +LI++ IVNL S FNDPS+PDY T+HI
Sbjct: 341 NTISNVESFYSQLIRKFIVNLSSDFNDPSSPDYQTVHI 354

BLAST of PI0002805 vs. NCBI nr
Match: KAA0031748.1 (uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-10
Identity = 73/230 (31.74%), Postives = 108/230 (46.96%), Query Frame = 0

Query: 89  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV-- 148
           DSDEQ  + LA L++K                 N   T+S  P+I+   + ++SS++V  
Sbjct: 161 DSDEQYDVPLARLLKKG-------------FVLNVASTKSVNPIISARSQESSSSEDVFI 220

Query: 149 ----PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSS 208
                +  S  +P+  S++  P+ +D P +   I + +     T   +  +P V+     
Sbjct: 221 PTPGLYHASDQEPS-PSQHSPPIRNDVPTVETPIDDENVDPTNTDATNIVEPDVY----- 280

Query: 209 AQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENVQ 268
             +     T   P  S+P  K      +N T  +   KIP N+ +VPIDGISFH EENVQ
Sbjct: 281 --DDFQLETQQSPGVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGISFHLEENVQ 340

Query: 269 K------------------PFYPRLIKELIVNLPSQFNDPSNPDYYTIHI 294
           +                   FY +LI+E IVNL S FNDPS+PDY T+HI
Sbjct: 341 RWKYVVWRRIVDETISNVESFYSQLIREFIVNLSSDFNDPSSPDYQTVHI 369

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7STQ89.9e-1231.74Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G0... [more]
A0A5A7URQ63.8e-1127.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CMY03.8e-1127.25uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=... [more]
A0A5D3CC658.4e-1133.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DB711.4e-1045.26Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v... [more]
Match NameE-valueIdentityDescription
KAA0032911.12.1e-1131.74gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0056211.17.8e-1127.25uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa][more]
XP_008465030.17.8e-1127.25PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo][more]
TYK08882.11.7e-1033.03uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa][more]
KAA0031748.13.0e-1031.74uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002805.1PI0002805.1mRNA