PI0002675 (gene) Melon (PI 482460) v1

Overview


Name	PI0002675
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Kirola-like
Location	chr10: 11155839 .. 11156357 (+)
RNA-Seq Expression	PI0002675
Synteny	PI0002675

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGAGCAAGGTATCGACGAAACCTTAGAAGATCAAACACTTGCTGGAAACCAAACAGAGGAGACAGCCGCAATCAGCACTGTCGTCGCCGCTGCCCTCGATGCTCGTATTGGTGCTGTCGTGGATGAATGGTTCCGCCGCCTTCAAACAACACCGGCCACCCTGAATCCGTCAGTTTTTCGCCGTAGGTGCCTCCACACACCGCCGCCGCCGTGGGCCTCCGAACCTACCCATCTTGTTCAGACACCACCGGCCAACCCTTCCCTGTCACCCTTGCCTTCATTTGCAGCCGTTAATGCCTCCCACGCACTGCTTCATGTTTTGCCATCTACCTTCGTCCAGCCACCACCACTTCTGCCGTCCAACATGTATGCCCTGCCACCCACTGACTCTGTTCCAAACCCTAGCAATTATCCAGGGATTGGGCATCCTCAAATCCACTCAACATTTGAAGTTGGAGAATTTTCGGCACATTCCAACCCTAACGTCCCAATCCTTCTTCTTCAGGTATAG

mRNA sequence

ATGGTATCAGAGCAAGGTATCGACGAAACCTTAGAAGATCAAACACTTGCTGGAAACCAAACAGAGGAGACAGCCGCAATCAGCACTGTCGTCGCCGCTGCCCTCGATGCTCGTATTGGTGCTGTCGTGGATGAATGGTTCCGCCGCCTTCAAACAACACCGGCCACCCTGAATCCGTCAGTTTTTCGCCGTAGGTGCCTCCACACACCGCCGCCGCCGTGGGCCTCCGAACCTACCCATCTTGTTCAGACACCACCGGCCAACCCTTCCCTGTCACCCTTGCCTTCATTTGCAGCCGTTAATGCCTCCCACGCACTGCTTCATGTTTTGCCATCTACCTTCGTCCAGCCACCACCACTTCTGCCGTCCAACATGTATGCCCTGCCACCCACTGACTCTGTTCCAAACCCTAGCAATTATCCAGGGATTGGGCATCCTCAAATCCACTCAACATTTGAAGTTGGAGAATTTTCGGCACATTCCAACCCTAACGTCCCAATCCTTCTTCTTCAGGTATAG

Coding sequence (CDS)

ATGGTATCAGAGCAAGGTATCGACGAAACCTTAGAAGATCAAACACTTGCTGGAAACCAAACAGAGGAGACAGCCGCAATCAGCACTGTCGTCGCCGCTGCCCTCGATGCTCGTATTGGTGCTGTCGTGGATGAATGGTTCCGCCGCCTTCAAACAACACCGGCCACCCTGAATCCGTCAGTTTTTCGCCGTAGGTGCCTCCACACACCGCCGCCGCCGTGGGCCTCCGAACCTACCCATCTTGTTCAGACACCACCGGCCAACCCTTCCCTGTCACCCTTGCCTTCATTTGCAGCCGTTAATGCCTCCCACGCACTGCTTCATGTTTTGCCATCTACCTTCGTCCAGCCACCACCACTTCTGCCGTCCAACATGTATGCCCTGCCACCCACTGACTCTGTTCCAAACCCTAGCAATTATCCAGGGATTGGGCATCCTCAAATCCACTCAACATTTGAAGTTGGAGAATTTTCGGCACATTCCAACCCTAACGTCCCAATCCTTCTTCTTCAGGTATAG

Protein sequence

MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPSVFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPLLPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNVPILLLQV

Homology

[Close]

BLAST of PI0002675 vs. ExPASy TrEMBL
Match: A0A1S4E325 (uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.3e-31
Identity = 90/172 (52.33%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETA-AISTVVAAA--LDARIGAVVDEWFRRLQTTPATL 60
           MVSE   D+ L++ T  GNQ EET   IS  +A    +DARI   +DEWF  LQTT A +
Sbjct: 1   MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60

Query: 61  NPSVFRRRC---LHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTF 120
             S F       +   P    SEP H +Q  PANPSL PL S    N  H  LHVLP   
Sbjct: 61  IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120

Query: 121 VQPPP-LLPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNV 166
           +QPP  LL SN+Y +PPT+S  NPS +P IG+PQIHSTFEVGE SAHSNPNV
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNV 172

[Close]

BLAST of PI0002675 vs. ExPASy TrEMBL
Match: A0A5D3BES5 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 9.6e-23
Identity = 75/166 (45.18%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPS 60
           MV EQG++ETLE QTL GNQTEET+AI+ V+A  +DA IGA +DE               
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60

Query: 61  VFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPL 120
                             +HL                      H  L+VLPST V+P PL
Sbjct: 61  ------------------SHL----------------------HVPLYVLPSTSVEPLPL 111

Query: 121 LPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNVP 167
           LPSN+Y+LP TDSVPNPSN+  + HPQI+ TFEV E SAHSN +VP
Sbjct: 121 LPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVP 111

[Close]

BLAST of PI0002675 vs. ExPASy TrEMBL
Match: A0A5D3D376 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002050 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.6e-22
Identity = 75/144 (52.08%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 28  STVVAAALDARIGAVVDEWFRRLQTTPATLNPSVFRRRCLHTPP------PPWASEPTHL 87
           S   AA +DARI A +DEWF  LQTT A   PS+       TPP      PP      H 
Sbjct: 167 SAAAAATVDARISATMDEWFHSLQTTLANAFPSILSP---STPPNTSHALPPELHASVHP 226

Query: 88  VQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPLLPSNMYALPPTDSVPNPSNYP 147
            QT P  PS+ P  S AA  A HAL+HVLP    QP PLLPSN+YALPPT    N S +P
Sbjct: 227 PQTMPTIPSVQPSFSSAAYIAPHALIHVLPPNSGQPSPLLPSNLYALPPT----NLSYHP 286

Query: 148 GIGHPQIHSTFEVGEFSAHSNPNV 166
              +PQIHSTFE GE S HSN NV
Sbjct: 287 NDKNPQIHSTFEFGESSLHSNLNV 303

[Close]

BLAST of PI0002675 vs. ExPASy TrEMBL
Match: A0A5A7UBX6 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.2e-22
Identity = 74/166 (44.58%), Postives = 89/166 (53.61%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPS 60
           MV EQG++ETLE QTL GNQTEET+AI+ V+A  +DA IGA +DE               
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60

Query: 61  VFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPL 120
                 LH P                                    L+VLPST V+P PL
Sbjct: 61  ----SLLHVP------------------------------------LYVLPSTSVEPLPL 111

Query: 121 LPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNVP 167
           LPSN+Y+LP TDSVPNPSN+  + HPQI+STFEV E S H N +VP
Sbjct: 121 LPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVP 111

[Close]

BLAST of PI0002675 vs. ExPASy TrEMBL
Match: A0A5D3CWE7 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00860 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 74/145 (51.03%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 32  AAALDARIGAVVDEWFRRLQTT-----PATLNPSVFRRRCLHTPP------PPWASEPTH 91
           AA +DARI A +DEWF  LQTT     P+ L+PS        TPP      PP      H
Sbjct: 85  AATVDARISATMDEWFHNLQTTLANAFPSNLSPS--------TPPNTSHALPPELHASVH 144

Query: 92  LVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPLLPSNMYALPPTDSVPNPSNY 151
             QT P  PS+ P  S AA  A HAL+HVLP  F QP PL+PSN+YALP T    N S +
Sbjct: 145 PPQTMPTIPSVQPSFSSAAYIALHALIHVLPPNFGQPSPLMPSNLYALPST----NLSYH 204

Query: 152 PGIGHPQIHSTFEVGEFSAHSNPNV 166
           P   +PQIHSTFE GE S HSN NV
Sbjct: 205 PNDKNPQIHSTFEFGESSLHSNLNV 217

[Close]

BLAST of PI0002675 vs. NCBI nr
Match: XP_016902631.1 (PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo])

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-31
Identity = 90/172 (52.33%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETA-AISTVVAAA--LDARIGAVVDEWFRRLQTTPATL 60
           MVSE   D+ L++ T  GNQ EET   IS  +A    +DARI   +DEWF  LQTT A +
Sbjct: 1   MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60

Query: 61  NPSVFRRRC---LHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTF 120
             S F       +   P    SEP H +Q  PANPSL PL S    N  H  LHVLP   
Sbjct: 61  IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120

Query: 121 VQPPP-LLPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNV 166
           +QPP  LL SN+Y +PPT+S  NPS +P IG+PQIHSTFEVGE SAHSNPNV
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNV 172

[Close]

BLAST of PI0002675 vs. NCBI nr
Match: TYJ97637.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-22
Identity = 75/166 (45.18%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPS 60
           MV EQG++ETLE QTL GNQTEET+AI+ V+A  +DA IGA +DE               
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60

Query: 61  VFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPL 120
                             +HL                      H  L+VLPST V+P PL
Sbjct: 61  ------------------SHL----------------------HVPLYVLPSTSVEPLPL 111

Query: 121 LPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNVP 167
           LPSN+Y+LP TDSVPNPSN+  + HPQI+ TFEV E SAHSN +VP
Sbjct: 121 LPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVP 111

[Close]

BLAST of PI0002675 vs. NCBI nr
Match: KAA0041978.1 (uncharacterized protein E6C27_scaffold67G004150 [Cucumis melo var. makuwa] >TYK17914.1 uncharacterized protein E5676_scaffold306G002050 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-22
Identity = 75/144 (52.08%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 28  STVVAAALDARIGAVVDEWFRRLQTTPATLNPSVFRRRCLHTPP------PPWASEPTHL 87
           S   AA +DARI A +DEWF  LQTT A   PS+       TPP      PP      H 
Sbjct: 167 SAAAAATVDARISATMDEWFHSLQTTLANAFPSILSP---STPPNTSHALPPELHASVHP 226

Query: 88  VQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPLLPSNMYALPPTDSVPNPSNYP 147
            QT P  PS+ P  S AA  A HAL+HVLP    QP PLLPSN+YALPPT    N S +P
Sbjct: 227 PQTMPTIPSVQPSFSSAAYIAPHALIHVLPPNSGQPSPLLPSNLYALPPT----NLSYHP 286

Query: 148 GIGHPQIHSTFEVGEFSAHSNPNV 166
              +PQIHSTFE GE S HSN NV
Sbjct: 287 NDKNPQIHSTFEFGESSLHSNLNV 303

[Close]

BLAST of PI0002675 vs. NCBI nr
Match: KAA0053242.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-21
Identity = 74/166 (44.58%), Postives = 89/166 (53.61%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPS 60
           MV EQG++ETLE QTL GNQTEET+AI+ V+A  +DA IGA +DE               
Sbjct: 1   MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60

Query: 61  VFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPL 120
                 LH P                                    L+VLPST V+P PL
Sbjct: 61  ----SLLHVP------------------------------------LYVLPSTSVEPLPL 111

Query: 121 LPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNVP 167
           LPSN+Y+LP TDSVPNPSN+  + HPQI+STFEV E S H N +VP
Sbjct: 121 LPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVP 111

[Close]

BLAST of PI0002675 vs. NCBI nr
Match: KAA0037909.1 (ribokinase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-21
Identity = 72/165 (43.64%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 1   MVSEQGIDETLEDQTLAGNQTEETAAISTVVAAALDARIGAVVDEWFRRLQTTPATLNPS 60
           ++ E  ID+TL++ +L GNQ EE A  S +V   +DA+I A +DEWFR LQTTP  +   
Sbjct: 247 VIMELDIDQTLDNTSLDGNQIEEIATQSVLV---VDAQISATMDEWFRCLQTTPVNM--- 306

Query: 61  VFRRRCLHTPPPPWASEPTHLVQTPPANPSLSPLPSFAAVNASHALLHVLPSTFVQPPPL 120
                                      +PSL PL S A  N  + LLHVLP   V+ P L
Sbjct: 307 --------------------------ISPSLPPLSSSAIYNVLYTLLHVLPLNSVKLPLL 366

Query: 121 LPSNMYALPPTDSVPNPSNYPGIGHPQIHSTFEVGEFSAHSNPNV 166
           L SN+Y LPPTDS  N S +  + +PQIHS FEVGE   H NPNV
Sbjct: 367 LQSNLYVLPPTDSATNVSYHLEVENPQIHSRFEVGESLTHVNPNV 379

The following BLAST results are available for this feature:

BLAST of PI0002675 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002675 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E325	4.3e-31	52.33	uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=...	[more]
A0A5D3BES5	9.6e-23	45.18	Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE...	[more]
A0A5D3D376	3.6e-22	52.08	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UBX6	6.2e-22	44.58	Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE...	[more]
A0A5D3CWE7	4.0e-21	51.03	Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00860 PE...	[more]

BLAST of PI0002675 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902631.1	8.9e-31	52.33	PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo]	[more]
TYJ97637.1	2.0e-22	45.18	kirola-like [Cucumis melo var. makuwa]	[more]
KAA0041978.1	7.5e-22	52.08	uncharacterized protein E6C27_scaffold67G004150 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0053242.1	1.3e-21	44.58	kirola-like [Cucumis melo var. makuwa]	[more]
KAA0037909.1	8.3e-21	43.64	ribokinase isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of PI0002675 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002675.1	PI0002675.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071704	organic substance metabolic process
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding