PI0002672 (gene) Melon (PI 482460) v1

Overview
NamePI0002672
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 1085287 .. 1085621 (+)
RNA-Seq ExpressionPI0002672
SyntenyPI0002672
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTGCAAGGAAAGCATGTGCAAAGCCATAAACATGAAGAAGCATAAATTAGAGGATATCAAGCACTTGTCACTCTCCATACCTTATTCAACTATTCCTAATGCTAAACTCTATAGCTAGGATAAAAAGACATCCCCAACTTGCCCAAAATTTATATATTATATATATAATATTTATATAATATCGAGCGAAGAATTGTTTCCGTCACGAGTTTAGGTTTTCTAATAGTTTCCAATCGAAAAGATTTCATTTGTGTATTATATAGGGATGCTACTTTCCTAGCTAGGATGAATCGGGGAAGTTATTGCCTCATACTAACCTCCCTCGAATGA

mRNA sequence

ATGTTCTGCAAGGAAAGCATGTGCAAAGCCATAAACATGAAGAAGCATAAATTAGAGGATATCAAGCACTTGTCACTCTCCATACCTTATTCAACTATTCCTAATGCTAAACTCTATAATTTCATTTGTGTATTATATAGGGATGCTACTTTCCTAGCTAGGATGAATCGGGGAAGTTATTGCCTCATACTAACCTCCCTCGAATGA

Coding sequence (CDS)

ATGTTCTGCAAGGAAAGCATGTGCAAAGCCATAAACATGAAGAAGCATAAATTAGAGGATATCAAGCACTTGTCACTCTCCATACCTTATTCAACTATTCCTAATGCTAAACTCTATAATTTCATTTGTGTATTATATAGGGATGCTACTTTCCTAGCTAGGATGAATCGGGGAAGTTATTGCCTCATACTAACCTCCCTCGAATGA

Protein sequence

MFCKESMCKAINMKKHKLEDIKHLSLSIPYSTIPNAKLYNFICVLYRDATFLARMNRGSYCLILTSLE
Homology
[Close]
BLAST of PI0002672 vs. ExPASy TrEMBL
Match: A0A0A0LKX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006020 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0 

Query: 1  MFCKESMCKAINMKKHKLEDIKHLSLSIPYSTIPNAKLYNF---ICVLYRDATFLARMNR 60
          MFCKESMCK INMKKHKLEDIKHLSLSIPYSTIPNAKLY++       +R     +RMNR
Sbjct: 1  MFCKESMCKPINMKKHKLEDIKHLSLSIPYSTIPNAKLYSYDKKTSPTWR--CCFSRMNR 60

Query: 61 GSYCL 63
          GSYCL
Sbjct: 61 GSYCL 63

[Close]
BLAST of PI0002672 vs. NCBI nr
Match: KGN60656.1 (hypothetical protein Csa_019285 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0 

Query: 1  MFCKESMCKAINMKKHKLEDIKHLSLSIPYSTIPNAKLYNF---ICVLYRDATFLARMNR 60
          MFCKESMCK INMKKHKLEDIKHLSLSIPYSTIPNAKLY++       +R     +RMNR
Sbjct: 1  MFCKESMCKPINMKKHKLEDIKHLSLSIPYSTIPNAKLYSYDKKTSPTWR--CCFSRMNR 60

Query: 61 GSYCL 63
          GSYCL
Sbjct: 61 GSYCL 63

The following BLAST results are available for this feature:
BLAST of PI0002672 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002672 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKX21.0e-1573.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006020 PE=4 SV=1[more]
BLAST of PI0002672 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60656.12.1e-1573.85hypothetical protein Csa_019285 [Cucumis sativus][more]
BLAST of PI0002672 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002672.1PI0002672.1mRNA