PI0002649 (gene) Melon (PI 482460) v1

Overview


Name	PI0002649
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr08: 1951019 .. 1954155 (+)
RNA-Seq Expression	PI0002649
Synteny	PI0002649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATATGTCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGGTGGAATTATAATAAAGGAAAATCATGTGATTGATGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACAAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAATAGTTGCAGGATATGATAGCAAACTCCATCCGGACTCAATATGGTGGAACTGCTCAAACTTTCTCTTCGTATTCCAAGCCATATACGAAGAGGATCGACAATCTGAAAATGTCGATTGGTTACTAGCCACCTAAGTTCCAACAATTTGATGGAAAAGGCAATCCAAAGCAACATGTTGCTCACTTTATCGAAACATGTGAAACTGCTGGTGCGCGAGGAGATTTGTTGGTTAGACAGTTCGTCCGAACTCTCAAGGGAAATGCCTTCGACTGGTACATCGATCTTGAGCCTGAAACCATTGATAGTTGGGAGCAGCTTGAGAGGGAATTTCTCAACCGCTTCTACAACACTCGATGTATCGTTAGCATGATAGAGCTAACGGCCACCAAGCAGCGAAAAGGCGAGCCGATCATTGACTACATTAATCGCTGGAGAGCATTAAGCCTTGACTGCAAAGACAGATTAACTGAACTGTCAGCAGTGGAAATATGCACTCAATGAATGCATTGGGGGCTCCTGTACATCTTGCAGGGAATAAAACCCCGCACCTTTGAAGAGTTAGTAACTAGAGCTCATGATATGGAGTTAAGTATTGCTAATAGAGGAAACAATGACCTGCTAATCCCAGAAGTGAGAAAGGAAAAGAAAGAATGAAGAGCAGCCTGAAGGTATCAAAGGGTGCTACCAAAGAAGCTATGATCGTTACTACAACCCCTTTAAAGTTTGTTCCTAAAGAGAAGAAGATGGAAAAACGCCAAGATGAAAGCAAAAAAAGACGCCTAACATTGAAAGAGAGGCAAGAAAAACTTTACCATTTTCCAGACTCTGACTTACCTGATATGTTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAGCAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATTGAGTCATCAGCAACCCTGTAGAGAAATGTTTCGTGTTAAAAGAGTTAATTTTGAAATTAGCTATAGACCAAACAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATGTTGCAGTAATGAGTCATGCAGAGGGTCGATCACTTGCTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATTTATTCTTCACCTGAGATCTTACAGAAAAATGACATCCGAACTGTTCACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATTCCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCATAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAACTGAGGATGACACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTATATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATTGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAGACGAAGGCATGTGATTCATGTTGTACATCGATATCATTCAACGATGAAGATTTGCTACTTGGGTCAAGGTTTCATAACAGACCTTTAATTGTGTCTGGATATGTTCGGGAGCAAAAGCTCAATCAAATTCTCATTGATAATGGCTCTACCGTCAACATTCTACCAAAATCAACCATGAATCGATTAGGTATCTCAATCGAGGAGTTATCAAGCAGTAAATTGGTGATTTAAGGCTTTAATCAAGGAGCACAGCGGGCGATAGGCACTGTTCGTCTGGAGATCACCATAGGCGATTTGTAGGCAAGCACTATATTTCATGTGATCGATTCAAGAACCACTTACAAGTTGTTGTCAGGACGACCATGGATTCATGAAAACGAAGTAGTAACTTCCACACTCTATCAATGCTTTAAATTTTATAAACAGGGAATAAAGAAGGTTGATGCCGATATTAAGCCATTTTCAGAGGCTGAGTCTCACTTTGCGGATGCAAAATTTTACTCAAAAGGAGATGATATAAGTGAGGTCATATCGACAAAAGTTCCTGTAACCAAAGGCACTTATAAGCTCGAACAAGGAACGATCACAATAAAAAAGTCAAAGGAAGTGGATGTACTAAAGGGTCGAGAGAATGATAAACTAACGACCCAAACTAAGTCTGAAGTGCCGACAAACGAAAGTATAGCGGTCCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGCGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTTGCGGTGGGAGGTGTCAAAATATTAAAGGAAAGCTTCACCGCGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAACAAACGACGGAGGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGTCATGGGTTTTCTCCTACACAAAGGAAGCTTTAA

mRNA sequence

ATGAGGATATGTCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGGTGGAATTATAATAAAGGAAAATCATGTGATTGATGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACAAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATTTATTCTTCACCTGAGATCTTACAGAAAAATGACATCCGAACTGTTCACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATTCCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCATAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAACTGAGGATGACACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTATATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATTGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAGACGAAGGCATGCACTTATAAGCTCGAACAAGGAACGATCACAATAAAAAAGTCAAAGGAAGTGGATGTACTAAAGGGTCGAGAGAATGATAAACTAACGACCCAAACTAAGTCTGAAGTGCCGACAAACGAAAGTATAGCGGTCCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGCGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTTGCGGTGGGAGGTGTCAAAATATTAAAGGAAAGCTTCACCGCGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAACAAACGACGGAGGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGTCATGGGTTTTCTCCTACACAAAGGAAGCTTTAA

Coding sequence (CDS)

ATGAGGATATGTCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGGTGGAATTATAATAAAGGAAAATCATGTGATTGATGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACAAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATTTATTCTTCACCTGAGATCTTACAGAAAAATGACATCCGAACTGTTCACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATTCCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCATAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAACTGAGGATGACACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTATATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATTGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAGACGAAGGCATGCACTTATAAGCTCGAACAAGGAACGATCACAATAAAAAAGTCAAAGGAAGTGGATGTACTAAAGGGTCGAGAGAATGATAAACTAACGACCCAAACTAAGTCTGAAGTGCCGACAAACGAAAGTATAGCGGTCCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGCGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTTGCGGTGGGAGGTGTCAAAATATTAAAGGAAAGCTTCACCGCGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAACAAACGACGGAGGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGTCATGGGTTTTCTCCTACACAAAGGAAGCTTTAA

Protein sequence

MRICHPLRSQRVSGKSCQNHQKGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPVVIYSSPEILQKNDIRTVHSKEEEKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREYKRKGKSHRRKARKNARKFQPITKEGEELPRPRQPITLKDFFPENFPLEIVSCHAVSTTEDDTSPSNSAEVSTTGDDTSPSKSAEATTKLEELPYMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKACTYKLEQGTITIKKSKEVDVLKGRENDKLTTQTKSEVPTNESIAVPQEKASKPPVLRYIPLSRRKKRESPFAENSQNFAVGGVKILKESFTAPLTKMDKGGAKRIEKESIEACLPEKQTTEGFDPKAYKLMAKAGYDFTTRTEFKSKIFDESHGFSPTQRKL

Homology

[Close]

BLAST of PI0002649 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-97
Identity = 305/889 (34.31%), Postives = 352/889 (39.60%), Query Frame = 0


Query: 22  KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
           KGGI+IKEN  IDEH S SER +EE+P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K V
Sbjct: 51  KGGIVIKENPAIDEHNSLSERLNEEVPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGV 110

Query: 82  EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
           EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                   
Sbjct: 111 EERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEM 170

Query: 142 ------------------------------------------------------------ 201
                                                                       
Sbjct: 171 IANSIKTQYGRPAQTLMERAIQNNMLLISSKLMKLLGIKPRTFEELATRAQDMELSIANR 230

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 231 GNNDLLVPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRP 290

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 291 TLKERQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPV 350

Query: 322 ----------------------------------------------SLIQFGSLEPVVIY 381
                                                         SLIQFGSLE +VIY
Sbjct: 351 EKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIY 410

Query: 382 SSPEILQKNDIRTVHSKEEEKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREYKRKGKS 441
           SSPE LQ ND RT   KEEEK V++ +EGWTLVTRRKK KQ+FS+KE   YR Y+ KGKS
Sbjct: 411 SSPEDLQNNDFRTDSPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKS 470

Query: 442 HRRKARKNARKFQPITKEGEELPRPRQPITLKDFFPENFPLEIVSCHAVSTTEDDTSPSN 483
            RR  RKN RKF PI +E E L RPR+PI LKDFFP+NFP+EI SCH  STTE+D  PSN
Sbjct: 471 QRRNTRKNLRKFLPIIEESEGLSRPRRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN 530

[Close]

BLAST of PI0002649 vs. ExPASy TrEMBL
Match: A0A5A7TSN4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00760 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 6.5e-93
Identity = 243/577 (42.11%), Postives = 299/577 (51.82%), Query Frame = 0


Query: 36  HGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHI 95
           H +  ER  +  P PN      +D+  + D++ E       L++  E  D +I      +
Sbjct: 162 HPTLKERQEKIYPFPN------SDLPDTLDQLLE-----KHLIQLPESLDKKI-----EL 221

Query: 96  ESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPVVIYSSPEILQKNDIRTVHSKEE 155
           E  D  +++H       +   + +   SLIQFGSLEPVVIYSSPE LQ ND R    KEE
Sbjct: 222 ELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGLKEE 281

Query: 156 EKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREYKRKGKSHRRKARKNARKFQPITKEG 215
           EK V++ +EGWTLVTRRKKHKQ+FS+KE   YR Y  KGKS RR  RKN RKF PI ++ 
Sbjct: 282 EKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKSQRRNTRKNLRKFLPIIEKS 341

Query: 216 EELPRPRQPITLKDFFPENFPLEIVSCHAVSTTEDDTSPSNSAEVSTTGDDTSPSKSAEA 275
           E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+D  P N               + + 
Sbjct: 342 EGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN---------------AMKE 401

Query: 276 TTKLEELPYMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAC-------------- 335
           T + E+L  + INDLL+L RE+KDTIIEILKNDDVST   S TKAC              
Sbjct: 402 TPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFSDEDL 461

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 462 LLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLLIQG 521

Query: 396 -------------------------------------------------------TYKLE 455
                                                                  T+K E
Sbjct: 522 FNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNE 581

Query: 456 QGTITIKKSKEVDVLKGRENDKLTTQTKSEVPTNESIAVPQEKASKPPVLRYIPLSRRKK 483
           Q  IT KK+ + D L  ++N +LTT+TK   P  E IA  Q++ S PPVLRYIPLSRRKK
Sbjct: 582 QEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKK 641

[Close]

BLAST of PI0002649 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-92
Identity = 310/955 (32.46%), Postives = 353/955 (36.96%), Query Frame = 0


Query: 22  KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
           KGGI+IKEN  IDEH S  ERS+EE   PNIMSVMVTDVDTSEDRMAELEKKVNML+KAV
Sbjct: 51  KGGIVIKENPTIDEHNSLYERSNEEASQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAV 110

Query: 82  EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
           EERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                   
Sbjct: 111 EERDFVIALFKNHIESRDAAESSHTQTIKNVNKGKAIMQESQPQNSTSIASLSIQQLQEM 170

Query: 142 ------------------------------------------------------------ 201
                                                                       
Sbjct: 171 IANSIKTQYGGPAQTHPSFNSSMERAIQNNMLLISSKLVKLLYTGLEPESIDSWNLLERD 230

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 231 FLNRFYSTRRIVSMIELTATKQRKGEPFIDYINHWRALSLDCKDRLTELSAVEMCTQGIH 290

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 291 WGLLYILQGIKPLPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDE 350

Query: 322 ------------------------------------------------------------ 381
                                                                       
Sbjct: 351 GENRRPTLKERQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPTEMGRVNDPIIANIIG 410

Query: 382 ----------------------------------------------------SLIQFGSL 441
                                                               SLIQFGSL
Sbjct: 411 SSAIPLKNVFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSL 470

Query: 442 EPVVIYSSPEILQKNDIRTVHSKEEEKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREY 483
           EPVVIYSSPE LQ ND R    KEEEK V++ +EGWTLVTRRKK KQ+FS+KE   YR Y
Sbjct: 471 EPVVIYSSPEDLQNNDFRADGPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTY 530

[Close]

BLAST of PI0002649 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-88
Identity = 312/1010 (30.89%), Postives = 357/1010 (35.35%), Query Frame = 0


Query: 15   KSCQNHQKGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKV 74
            K      KGGI+IKEN  IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRM  LEKKV
Sbjct: 44   KQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMVVLEKKV 103

Query: 75   NMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------ 134
            NM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES            
Sbjct: 104  NMHMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLS 163

Query: 135  ------------------------------------------------------------ 194
                                                                        
Sbjct: 164  VQQLQEMIANSIKTQYGGPAQTHPSFNSSMERGNPKQHVAHFIETCETAGTRGDLLVKQF 223

Query: 195  ------------------------------------------------------------ 254
                                                                        
Sbjct: 224  VRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDY 283

Query: 255  ------------------------------------------------------------ 314
                                                                        
Sbjct: 284  INRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIAN 343

Query: 315  ------------------------------------------------------------ 374
                                                                        
Sbjct: 344  RGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRR 403

Query: 375  ------------------------------------------------------------ 434
                                                                        
Sbjct: 404  PTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHP 463

Query: 435  -----------------------------------------------SLIQFGSLEPVVI 483
                                                           SLIQFGSLEPVVI
Sbjct: 464  VEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVI 523

[Close]

BLAST of PI0002649 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87
Identity = 313/1025 (30.54%), Postives = 359/1025 (35.02%), Query Frame = 0


Query: 22   KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
            KGGI+IKEN  +DEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAV
Sbjct: 51   KGGIVIKENPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAV 110

Query: 82   EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
            EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                   
Sbjct: 111  EERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEM 170

Query: 142  ------------------------------------------------------------ 201
                                                                        
Sbjct: 171  IANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIET 230

Query: 202  ------------------------------------------------------------ 261
                                                                        
Sbjct: 231  CETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIE 290

Query: 262  ------------------------------------------------------------ 321
                                                                        
Sbjct: 291  LTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFE 350

Query: 322  ------------------------------------------------------------ 381
                                                                        
Sbjct: 351  ELATRAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSK 410

Query: 382  ------------------------------------------------------------ 441
                                                                        
Sbjct: 411  EKKMEKRQDEGEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRV 470

Query: 442  ------------------------------------------------------------ 483
                                                                        
Sbjct: 471  NDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSA 530

[Close]

BLAST of PI0002649 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 9.0e-97
Identity = 305/889 (34.31%), Postives = 352/889 (39.60%), Query Frame = 0


Query: 22  KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
           KGGI+IKEN  IDEH S SER +EE+P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K V
Sbjct: 51  KGGIVIKENPAIDEHNSLSERLNEEVPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGV 110

Query: 82  EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
           EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                   
Sbjct: 111 EERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEM 170

Query: 142 ------------------------------------------------------------ 201
                                                                       
Sbjct: 171 IANSIKTQYGRPAQTLMERAIQNNMLLISSKLMKLLGIKPRTFEELATRAQDMELSIANR 230

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 231 GNNDLLVPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRP 290

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 291 TLKERQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPV 350

Query: 322 ----------------------------------------------SLIQFGSLEPVVIY 381
                                                         SLIQFGSLE +VIY
Sbjct: 351 EKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIY 410

Query: 382 SSPEILQKNDIRTVHSKEEEKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREYKRKGKS 441
           SSPE LQ ND RT   KEEEK V++ +EGWTLVTRRKK KQ+FS+KE   YR Y+ KGKS
Sbjct: 411 SSPEDLQNNDFRTDSPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKS 470

Query: 442 HRRKARKNARKFQPITKEGEELPRPRQPITLKDFFPENFPLEIVSCHAVSTTEDDTSPSN 483
            RR  RKN RKF PI +E E L RPR+PI LKDFFP+NFP+EI SCH  STTE+D  PSN
Sbjct: 471 QRRNTRKNLRKFLPIIEESEGLSRPRRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN 530

[Close]

BLAST of PI0002649 vs. NCBI nr
Match: KAA0046553.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-92
Identity = 243/577 (42.11%), Postives = 299/577 (51.82%), Query Frame = 0


Query: 36  HGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHI 95
           H +  ER  +  P PN      +D+  + D++ E       L++  E  D +I      +
Sbjct: 162 HPTLKERQEKIYPFPN------SDLPDTLDQLLE-----KHLIQLPESLDKKI-----EL 221

Query: 96  ESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPVVIYSSPEILQKNDIRTVHSKEE 155
           E  D  +++H       +   + +   SLIQFGSLEPVVIYSSPE LQ ND R    KEE
Sbjct: 222 ELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGLKEE 281

Query: 156 EKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREYKRKGKSHRRKARKNARKFQPITKEG 215
           EK V++ +EGWTLVTRRKKHKQ+FS+KE   YR Y  KGKS RR  RKN RKF PI ++ 
Sbjct: 282 EKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKSQRRNTRKNLRKFLPIIEKS 341

Query: 216 EELPRPRQPITLKDFFPENFPLEIVSCHAVSTTEDDTSPSNSAEVSTTGDDTSPSKSAEA 275
           E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+D  P N               + + 
Sbjct: 342 EGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN---------------AMKE 401

Query: 276 TTKLEELPYMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAC-------------- 335
           T + E+L  + INDLL+L RE+KDTIIEILKNDDVST   S TKAC              
Sbjct: 402 TPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFSDEDL 461

Query: 336 ------------------------------------------------------------ 395
                                                                       
Sbjct: 462 LLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLLIQG 521

Query: 396 -------------------------------------------------------TYKLE 455
                                                                  T+K E
Sbjct: 522 FNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNE 581

Query: 456 QGTITIKKSKEVDVLKGRENDKLTTQTKSEVPTNESIAVPQEKASKPPVLRYIPLSRRKK 483
           Q  IT KK+ + D L  ++N +LTT+TK   P  E IA  Q++ S PPVLRYIPLSRRKK
Sbjct: 582 QEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKK 641

[Close]

BLAST of PI0002649 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 349.7 bits (896), Expect = 3.9e-92
Identity = 310/955 (32.46%), Postives = 353/955 (36.96%), Query Frame = 0


Query: 22  KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
           KGGI+IKEN  IDEH S  ERS+EE   PNIMSVMVTDVDTSEDRMAELEKKVNML+KAV
Sbjct: 51  KGGIVIKENPTIDEHNSLYERSNEEASQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAV 110

Query: 82  EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
           EERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                   
Sbjct: 111 EERDFVIALFKNHIESRDAAESSHTQTIKNVNKGKAIMQESQPQNSTSIASLSIQQLQEM 170

Query: 142 ------------------------------------------------------------ 201
                                                                       
Sbjct: 171 IANSIKTQYGGPAQTHPSFNSSMERAIQNNMLLISSKLVKLLYTGLEPESIDSWNLLERD 230

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 231 FLNRFYSTRRIVSMIELTATKQRKGEPFIDYINHWRALSLDCKDRLTELSAVEMCTQGIH 290

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 291 WGLLYILQGIKPLPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDE 350

Query: 322 ------------------------------------------------------------ 381
                                                                       
Sbjct: 351 GENRRPTLKERQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPTEMGRVNDPIIANIIG 410

Query: 382 ----------------------------------------------------SLIQFGSL 441
                                                               SLIQFGSL
Sbjct: 411 SSAIPLKNVFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSL 470

Query: 442 EPVVIYSSPEILQKNDIRTVHSKEEEKHVEDADEGWTLVTRRKKHKQNFSKKEFRLYREY 483
           EPVVIYSSPE LQ ND R    KEEEK V++ +EGWTLVTRRKK KQ+FS+KE   YR Y
Sbjct: 471 EPVVIYSSPEDLQNNDFRADGPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTY 530

[Close]

BLAST of PI0002649 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 4.5e-88
Identity = 312/1010 (30.89%), Postives = 357/1010 (35.35%), Query Frame = 0


Query: 15   KSCQNHQKGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKV 74
            K      KGGI+IKEN  IDEH S SERS+EE+P PNIMSVMVTDVDTSEDRM  LEKKV
Sbjct: 44   KQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMVVLEKKV 103

Query: 75   NMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------ 134
            NM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES            
Sbjct: 104  NMHMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLS 163

Query: 135  ------------------------------------------------------------ 194
                                                                        
Sbjct: 164  VQQLQEMIANSIKTQYGGPAQTHPSFNSSMERGNPKQHVAHFIETCETAGTRGDLLVKQF 223

Query: 195  ------------------------------------------------------------ 254
                                                                        
Sbjct: 224  VRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDY 283

Query: 255  ------------------------------------------------------------ 314
                                                                        
Sbjct: 284  INRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIAN 343

Query: 315  ------------------------------------------------------------ 374
                                                                        
Sbjct: 344  RGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRR 403

Query: 375  ------------------------------------------------------------ 434
                                                                        
Sbjct: 404  PTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHP 463

Query: 435  -----------------------------------------------SLIQFGSLEPVVI 483
                                                           SLIQFGSLEPVVI
Sbjct: 464  VEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVI 523

[Close]

BLAST of PI0002649 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 2.9e-87
Identity = 313/1025 (30.54%), Postives = 359/1025 (35.02%), Query Frame = 0


Query: 22   KGGIIIKENHVIDEHGSSSERSSEEMPHPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAV 81
            KGGI+IKEN  +DEH S SERS+EE+P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAV
Sbjct: 51   KGGIVIKENPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAV 110

Query: 82   EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES------------------- 141
            EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                   
Sbjct: 111  EERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEM 170

Query: 142  ------------------------------------------------------------ 201
                                                                        
Sbjct: 171  IANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIET 230

Query: 202  ------------------------------------------------------------ 261
                                                                        
Sbjct: 231  CETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIE 290

Query: 262  ------------------------------------------------------------ 321
                                                                        
Sbjct: 291  LTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFE 350

Query: 322  ------------------------------------------------------------ 381
                                                                        
Sbjct: 351  ELATRAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSK 410

Query: 382  ------------------------------------------------------------ 441
                                                                        
Sbjct: 411  EKKMEKRQDEGEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRV 470

Query: 442  ------------------------------------------------------------ 483
                                                                        
Sbjct: 471  NDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSA 530

The following BLAST results are available for this feature:

BLAST of PI0002649 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJR2	4.3e-97	34.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TSN4	6.5e-93	42.11	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3D1E5	1.9e-92	32.46	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5D3BIH8	2.2e-88	30.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TZU9	1.4e-87	30.54	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]

BLAST of PI0002649 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053731.1	9.0e-97	34.31	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]
KAA0046553.1	1.3e-92	42.11	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK18071.1	3.9e-92	32.46	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	4.5e-88	30.89	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	2.9e-87	30.54	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]

BLAST of PI0002649 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002649.1	PI0002649.1	mRNA