PI0002646 (gene) Melon (PI 482460) v1

Overview


Name	PI0002646
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	PB1 domain-containing protein
Location	chr10: 20603972 .. 20606615 (-)
RNA-Seq Expression	PI0002646
Synteny	PI0002646

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTTAAGAAAGACCAAAAGTTTGGGTTTTCTTTTCTCTCTCTCCTTAGCTTTCTGCTCCCAAATTCCAATTCCGCCCTTCCTCCGCCGCACGCCATGACGGAACCACCGCCTCCGCCCCCAACTCAACCGATTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCCCCCGGCCCACTCGCCGGCCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCGCGTTTGTCGAAGACGCTTCTTAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCAACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGGTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAACGGTGGGGTTGGGGCTGGTGTAGTTCGAGTTCAAGATCAGAAGTTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCGCGGCACTCTCTTCACCCCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGCCGGCCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGTCGGTCGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGACTCGGTGTCAAGGTACTAATTGCTTGATTTTCTTTATCATTCTATGGTATTACCAATTCTGCTTAATTTCTTTCATCAATTAGAAGTTTGTGATGATTGTTAGTCTGAGTTTGTGCATGTTCTTTCTGTTTAATTTTGTTTCTTCAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATATTCCTGATCAGAACGCTCGAGTTCATATTCAACAACAGGTCCAAGAATCAGGATATATGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACACTACATTCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCATCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAAGCTTATGGCAACTTGCCAGTACAGCAATCTACGATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGGCCTCAAACCCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGCTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTCCACCTACATCCGCCACTGCAAATTATGCCTATGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAGTCGGTTCAGAAAGATGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATTTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTATTGTTGTTGTCTTCTGGTTCGTGTGCCATATTATTTGTTTATTGCCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTATGAACTCAAACAAGGTGTGCTTGTGCAGTCAATGTGTTATAGAATTAGCAAGAGTTTTTGCATCAA

mRNA sequence

GTTCTTTAAGAAAGACCAAAAGTTTGGGTTTTCTTTTCTCTCTCTCCTTAGCTTTCTGCTCCCAAATTCCAATTCCGCCCTTCCTCCGCCGCACGCCATGACGGAACCACCGCCTCCGCCCCCAACTCAACCGATTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCCCCCGGCCCACTCGCCGGCCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCGCGTTTGTCGAAGACGCTTCTTAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCAACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGGTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAACGGTGGGGTTGGGGCTGGTGTAGTTCGAGTTCAAGATCAGAAGTTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCGCGGCACTCTCTTCACCCCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGCCGGCCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGTCGGTCGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGACTCGGTGTCAAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATATTCCTGATCAGAACGCTCGAGTTCATATTCAACAACAGGTCCAAGAATCAGGATATATGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACACTACATTCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCATCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAAGCTTATGGCAACTTGCCAGTACAGCAATCTACGATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGGCCTCAAACCCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGCTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTCCACCTACATCCGCCACTGCAAATTATGCCTATGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAGTCGGTTCAGAAAGATGAAACAATTTTGGAATAAAGTATTTGGTTTTGCTTACAATTTTCTATTTTATTGTCTGTCTTGTTATTGGTATTTATTGGTTTGTGCATGTATCTGAGATAGAGATAATAAGTATTGTTGTTGTCTTCTGGTTCGTGTGCCATATTATTTGTTTATTGCCATAGAAAATGAAAAAGTGGTCTGGAGATTATAGTTATACTGTAAAAGTTATGAACTCAAACAAGGTGTGCTTGTGCAGTCAATGTGTTATAGAATTAGCAAGAGTTTTTGCATCAA

Coding sequence (CDS)

ATGACGGAACCACCGCCTCCGCCCCCAACTCAACCGATTCCGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCCTCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCCCCCGGCCCACTCGCCGGCCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTCCCTCGCCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTCACTGCGCGTTTGTCGAAGACGCTTCTTAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTCTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTCGAGAGCTCAACTAGTTCCGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTCGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGGTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGAGGATAGTGGCAATAACGGTGGGGTTGGGGCTGGTGTAGTTCGAGTTCAAGATCAGAAGTTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCAAGATGAAGCTTTCGCGGCACTCTCTTCACCCCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGCCGGCCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGTCGGTCGGATACCGGAAACCACTACCACCTCAGCCACAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGACTCGGTGTCAAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCCTCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATATTCCTGATCAGAACGCTCGAGTTCATATTCAACAACAGGTCCAAGAATCAGGATATATGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACACTACATTCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCATCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAAGCTTATGGCAACTTGCCAGTACAGCAATCTACGATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGGCCTCAAACCCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGCTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTCCACCTACATCCGCCACTGCAAATTATGCCTATGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAG

Protein sequence

MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIEEQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDDERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQQQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL

Homology

[Close]

BLAST of PI0002646 vs. ExPASy TrEMBL
Match: A0A5A7SVC4 (RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001310 PE=4 SV=1)

HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 692/707 (97.88%), Postives = 696/707 (98.44%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPPPPPTQ IPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQKLGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQQDEAF ALSSPPPLPTTIV SA  SAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVN PDQNARVHIQQQVQESGY+LHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQ-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540
           QQ QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600
           YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660
           ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of PI0002646 vs. ExPASy TrEMBL
Match: A0A1S3BF26 (RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 PE=4 SV=1)

HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 692/707 (97.88%), Postives = 696/707 (98.44%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPPPPPTQ IPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQKLGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQQDEAF ALSSPPPLPTTIV SA  SAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVN PDQNARVHIQQQVQESGY+LHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQ-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540
           QQ QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600
           YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660
           ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of PI0002646 vs. ExPASy TrEMBL
Match: A0A0A0KWH3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV=1)

HSP 1 Score: 1333.5 bits (3450), Expect = 0.0e+00
Identity = 693/708 (97.88%), Postives = 695/708 (98.16%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPP P TQPI PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQ DEAFAALSSPPPLPTTIVASA  SAIPVSSAAGVVVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQ 480
           QEQVVHQIPSSAVRLPGSPADPKVN PDQNARVHIQQQVQE GY+LHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 481 Q--QQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           Q  QQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

[Close]

BLAST of PI0002646 vs. ExPASy TrEMBL
Match: A0A6J1GYH7 (PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4 SV=1)

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 641/720 (89.03%), Postives = 661/720 (91.81%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           M EPPP    QP+P A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GA  VR+QDQK+G+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQKQQDEAF ALSSPPPLPTTIVASA  SAIPVSSAAGV VG+YTNRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYR+PLPPQPQSL PQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS   LPG+PADP+VNI DQNARVHI QQVQESGY+L S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 ------------QQQQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 540
                       QQQQQQQPQQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 541 HHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYN 600
           HHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIPPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 601 HMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTS 660
           H+RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV YNQGYSHIQHPSQSV PTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 661 ATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           ATANYAYEFSDPAHSQIY+TQPL PSQYQAMPAAAVMLPENSAQ PTDNIK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

[Close]

BLAST of PI0002646 vs. ExPASy TrEMBL
Match: A0A6J1HQW4 (RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465567 PE=4 SV=1)

HSP 1 Score: 1212.6 bits (3136), Expect = 0.0e+00
Identity = 641/739 (86.74%), Postives = 659/739 (89.17%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           M EPPP    QP+P A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GAG VR+QDQK+GIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQK QDEAF ALSSPPPLPTTIVASA  SAIPVS AA V VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYR+PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS  RLPG+P+DP+VNI DQNARVHI QQVQESGY+L S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -------------------------------QQQQQQQPQQHPPQPQQFIHAGAHYIHQH 540
                                          QQQQQQQ QQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 541 PSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIP 600
           PSGAV IPAFFPVYSPQ HHHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIP
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 601 PGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVG 660
           PGRPQTPPNPTLVTTAAYNH RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 661 YNQGYSHIQHPSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPEN 707
           YNQGYSHIQHPSQSV PTSATANYAYEFSDPAHSQIYYTQPL PSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

[Close]

BLAST of PI0002646 vs. NCBI nr
Match: XP_008446641.1 (PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa] >TYK09140.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 692/707 (97.88%), Postives = 696/707 (98.44%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPPPPPTQ IPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQKLGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQQDEAF ALSSPPPLPTTIV SA  SAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVN PDQNARVHIQQQVQESGY+LHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQ-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540
           QQ QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY
Sbjct: 481 QQPQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVY 540

Query: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600
           YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA
Sbjct: 541 YLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMA 600

Query: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660
           ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA
Sbjct: 601 ANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPA 660

Query: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 HSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

[Close]

BLAST of PI0002646 vs. NCBI nr
Match: XP_004135079.1 (RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetical protein Csa_009068 [Cucumis sativus])

HSP 1 Score: 1333.5 bits (3450), Expect = 0.0e+00
Identity = 693/708 (97.88%), Postives = 695/708 (98.16%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPP P TQPI PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQ DEAFAALSSPPPLPTTIVASA  SAIPVSSAAGVVVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQQ 480
           QEQVVHQIPSSAVRLPGSPADPKVN PDQNARVHIQQQVQE GY+LHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 481 Q--QQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           Q  QQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

[Close]

BLAST of PI0002646 vs. NCBI nr
Match: XP_038892018.1 (putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispida])

HSP 1 Score: 1308.1 bits (3384), Expect = 0.0e+00
Identity = 679/711 (95.50%), Postives = 691/711 (97.19%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           MTEPPPPPPTQP+PP VSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQPLPPVVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+GGV AG VRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVAAGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPA-SAIPVSSAAGVVVGEYTNRVISD 360
           EQFSQMSVGQKQQDEAF ALSSPPPLPTTIVASA A SAIPV SAAGV VGEYTNRVISD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAAGSAIPVCSAAGVGVGEYTNRVISD 360

Query: 361 DERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM 420
           DERSDHGA VGYRKPLPPQPQSL PQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM
Sbjct: 361 DERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM 420

Query: 421 YQEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQLQ 480
           YQEQVVHQIP+SAVRLPGSPADPKVN+ DQNARVHI QQVQESGY+LHSQYDQHQHQQLQ
Sbjct: 421 YQEQVVHQIPTSAVRLPGSPADPKVNVSDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQ 480

Query: 481 QQQQQ----QPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQ 540
           QQQQQ    QPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQ
Sbjct: 481 QQQQQQQQPQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQ 540

Query: 541 YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAK 600
           YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRN PIAK
Sbjct: 541 YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNAPIAK 600

Query: 601 TEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEF 660
           TEM+ANA+KQTTTTPQSLVQVP +QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEF
Sbjct: 601 TEMSANAYKQTTTTPQSLVQVPASQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEF 660

Query: 661 SDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           SDPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDN+KQQMRTSQPL
Sbjct: 661 SDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNMKQQMRTSQPL 711

[Close]

BLAST of PI0002646 vs. NCBI nr
Match: XP_022956700.1 (putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 641/720 (89.03%), Postives = 661/720 (91.81%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           M EPPP    QP+P A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GA  VR+QDQK+G+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQKQQDEAF ALSSPPPLPTTIVASA  SAIPVSSAAGV VG+YTNRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYR+PLPPQPQSL PQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS   LPG+PADP+VNI DQNARVHI QQVQESGY+L S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 ------------QQQQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 540
                       QQQQQQQPQQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 541 HHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYN 600
           HHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIPPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 601 HMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTS 660
           H+RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV YNQGYSHIQHPSQSV PTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 661 ATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 707
           ATANYAYEFSDPAHSQIY+TQPL PSQYQAMPAAAVMLPENSAQ PTDNIK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

[Close]

BLAST of PI0002646 vs. NCBI nr
Match: XP_022966093.1 (RNA polymerase II degradation factor 1-like [Cucurbita maxima])

HSP 1 Score: 1212.6 bits (3136), Expect = 0.0e+00
Identity = 641/739 (86.74%), Postives = 659/739 (89.17%), Query Frame = 0


Query: 1   MTEPPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60
           M EPPP    QP+P A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKLGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GAG VR+QDQK+GIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 301 EQFSQMSVGQKQQDEAFAALSSPPPLPTTIVASAPASAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQK QDEAF ALSSPPPLPTTIVASA  SAIPVS AA V VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 361 ERSDHGASVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGA VGYR+PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNIPDQNARVHIQQQVQESGYMLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS  RLPG+P+DP+VNI DQNARVHI QQVQESGY+L S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -------------------------------QQQQQQQPQQHPPQPQQFIHAGAHYIHQH 540
                                          QQQQQQQ QQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 541 PSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIP 600
           PSGAV IPAFFPVYSPQ HHHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIP
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 601 PGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVG 660
           PGRPQTPPNPTLVTTAAYNH RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 661 YNQGYSHIQHPSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPEN 707
           YNQGYSHIQHPSQSV PTSATANYAYEFSDPAHSQIYYTQPL PSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

[Close]

BLAST of PI0002646 vs. TAIR 10
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 567.0 bits (1460), Expect = 2.1e-161
Identity = 378/751 (50.33%), Postives = 485/751 (64.58%), Query Frame = 0


Query: 10  TQPIPPAVSPHL--NYPESLDSSPRSRNTDTWDEPLAP---------GPLAGRLRLMCSY 69
           T P+PP + PH+  +YPESLDSSPRSR TD WD+  AP           ++ +LR MCSY
Sbjct: 22  TAPVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSGGGGGGGGSAVSSKLRFMCSY 81

Query: 70  GGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLD 129
           GGHI+PRPHDK+LCY+ G+TRIVVVDR++SL  L ARLS TLL+GR FTLKYQLP+EDLD
Sbjct: 82  GGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQLPSEDLD 141

Query: 130 SLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSS 189
           SLISVTTDEDL+NMI+EYDRT S S+  + KPSRLRLFLF  KP+ +QS+G ILESS  S
Sbjct: 142 SLISVTTDEDLDNMIEEYDRTISASN--STKPSRLRLFLFTSKPEATQSMGQILESSAKS 201

Query: 190 DDWFLNALNGAGLLNRGFSDS-ASVNCLLGLDDDVGV--NNLDSGPREADGSQ------- 249
           DDWFLNALN AGLLNRGFSDS  +VN LLGLDD + +  N+ D+  R+ D          
Sbjct: 202 DDWFLNALNSAGLLNRGFSDSDTNVNRLLGLDDALALRSNSGDNNNRDGDDGSVKSAKQQ 261

Query: 250 ---PGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGV 309
              P      + G QDV+ +PDSPM++T+SSFGSTSSSPSLANLPPIRVHVE+ G     
Sbjct: 262 QPPPPQQQEQQQGGQDVNCLPDSPMLDTSSSFGSTSSSPSLANLPPIRVHVEEPG----- 321

Query: 310 GAGVVRVQDQK-LGIEEQFSQMSVGQKQQ--DEAFAALSSPPPLPTTI-VASAPASAIPV 369
             GV  + DQ+ LGIEEQF++ +VG K Q  D+ FAA+SSPPP+P TI + +AP +A  V
Sbjct: 322 --GVRTLPDQRNLGIEEQFARFNVGNKHQLHDDGFAAISSPPPMPVTIALPAAPVTAATV 381

Query: 370 SSAAGVVVGEYTNRVISDDERSDHGASVGYRKPLPP--QPQSLPP----QLQQKSSGLVD 429
           S+       E+  RV SDDERSDHG   GYRKP  P  QPQ+LPP    QL+  S G  +
Sbjct: 382 SN-------EFQARVYSDDERSDHGVQAGYRKPPTPRSQPQNLPPQQAHQLKSNSGGGHE 441

Query: 430 IPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPG--SPADPKVNIPDQNARV 489
           +PSP+SVSSDSS++NPM   +P +YQE +  QIPS +  + G  +P+DP   +       
Sbjct: 442 LPSPNSVSSDSSMSNPMFHQRPSVYQEPIA-QIPSGSTVVTGMINPSDPSTLLS------ 501

Query: 490 HIQQQVQESGYMLHSQYDQHQHQQLQQQQQQQPQQHPPQPQQFIHAGA--HYIHQHPSGA 549
             Q Q Q+  Y+LH Q++       QQ  Q QPQ      QQFIH  A   YIH HPS  
Sbjct: 502 --QHQNQDPAYILHPQFE-------QQSAQSQPQ------QQFIHTAAPPQYIHHHPSSG 561

Query: 550 VQIPAFFPVYSPQH-----HHHPHQIEQQ-YPVYYLPARQGQAYGNLPVQQS-TISESAT 609
           + +P +  VY  Q      H H  +++QQ YPVYY+ A       ++PV QS ++S++A 
Sbjct: 562 LPVPTYIQVYPSQQPQQSFHQHAGRLDQQPYPVYYVTAPVPPRPYSMPVPQSPSVSDAAG 621

Query: 610 AIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTP-----QSLVQVPTT 669
           +IP       PN T++     NHMR+    K EM        TT P     Q + Q+PT 
Sbjct: 622 SIPSNH----PNSTMMPPPPNNHMRSVSSGKPEMGQAGV--YTTAPGVGGAQMVHQIPT- 681

Query: 670 QHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAM-- 707
            +QQQ++GY+Q    I+HP QS   ++   NY YE+ D AH+QIYYTQP+  +QYQ M  
Sbjct: 682 -NQQQFMGYSQ----IRHPPQS--GSAGNPNYGYEYVDNAHTQIYYTQPMGHAQYQTMTG 720

[Close]

BLAST of PI0002646 vs. TAIR 10
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 308.5 bits (789), Expect = 1.4e-83
Identity = 284/744 (38.17%), Postives = 390/744 (52.42%), Query Frame = 0


Query: 4   PPPPPPTQPIPPAVSPHLNYPESLDSSPRSRNTDTW--DEPLAPGPLAGRLRLMCSYGGH 63
           P P        PA    +   + +D SPR+  TDT    EPLA  P   +LRLMCS+GGH
Sbjct: 15  PTPAAAVSSAIPAPVKSVAVQQPIDGSPRAVATDTGGIPEPLAAVP-GAKLRLMCSFGGH 74

Query: 64  IVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLI 123
           I+PRPHDK+L Y  GETRIVVVDR  SLS L +RLS  LLNGR FTLKYQLP+EDLDSL+
Sbjct: 75  IMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKYQLPSEDLDSLV 134

Query: 124 SVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDW 183
           ++TTDEDLENMI+EYDR AS+++  A    RLRLFLF  K + + ++G +L+  T SD W
Sbjct: 135 TITTDEDLENMIEEYDRAASSAT--ATATQRLRLFLFANKLETAATMGSLLD-GTKSDTW 194

Query: 184 FLNALNGAGLLNRGFSDSASV-NCLLGLDDDVG----VNNLDSGPREADGSQPGSFGNGK 243
           F++ALN +GLL RG SDSA+V N L+ LD+  G    + NL++     +  +     NG 
Sbjct: 195 FVDALNQSGLLPRGLSDSAAVNNTLVNLDEASGGETEIQNLETNVGGENNKRGDLVANGV 254

Query: 244 GGKQDVH--SVPDSPMIETT-SSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQ 303
              Q++H  S+PDSPM+E   SS GS+SSSPS +NLPPIRV V                +
Sbjct: 255 ISHQEMHMSSMPDSPMMEAAGSSIGSSSSSPSTSNLPPIRVRVS---------------E 314

Query: 304 DQKLGIEEQFSQMSVG----QKQQDEAFAALSS-PPPLPTTIVASAPASAIPVSSAAGVV 363
           DQ+  IEEQ +QM+      Q+Q D+  + +++ P  +P   +  A   A+  ++A G  
Sbjct: 315 DQR--IEEQLAQMTFSNMQTQRQFDDGVSLMANRPMMIPPGAMNDA---AMAYNNAPGDG 374

Query: 364 VGEYTNRVIS-DDERSDHGASVGYRK-PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDS 423
               +N  +S +D+RS+ G S GYRK PLP QP ++PP    ++ G   + SPDSV+SD+
Sbjct: 375 TAPASNGHVSPEDDRSELGVSTGYRKPPLPMQPVTIPP----RTVGGYGLTSPDSVASDT 434

Query: 424 SLNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNIPD----QNARVHIQQQVQES 483
           S+++  S SKP+ YQ+Q            P  P  P V  P+    Q+++V  Q +   +
Sbjct: 435 SISSATSFSKPMYYQDQP-----------PALPRAPPVAQPETTSAQSSQVLPQTENTSA 494

Query: 484 GYMLHSQYDQHQHQQLQQQQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYS 543
               H       +  + QQQQQ   Q P     F+H G  YI  HPS       + P+YS
Sbjct: 495 QTTSHVLSQPGTYTTMDQQQQQPLAQQP-----FLHQGVQYI-PHPS------QYIPIYS 554

Query: 544 PQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTT 603
            Q        +Q YPVY +   Q Q Y                IP G P   PN    T 
Sbjct: 555 HQ--------QQNYPVYVMSVPQSQQY----------------IPAGTPPLYPNSKPGTN 614

Query: 604 AAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV 663
                      ++ E A N ++     P  ++Q+   Q Q QY+GY     H  + + + 
Sbjct: 615 -----------SRPEAAQNVYR---AAPPQVIQL---QQQHQYMGYAGAPQHSTNANANY 666

Query: 664 ------PPTSATANYA--YEFSDPAHSQIYYTQPLP--------PSQYQAM--PAAAVML 707
                   T+A ANY   +E+++  +  +YY    P         S YQ+M   AAA  L
Sbjct: 675 GTGAPQHSTNANANYGGPFEYTNSPNETVYYHTQAPAANTAIPLASPYQSMTPAAAAAAL 666

[Close]

BLAST of PI0002646 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 141.7 bits (356), Expect = 2.2e-33
Identity = 116/287 (40.42%), Postives = 156/287 (54.36%), Query Frame = 0


Query: 13  IPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLC 72
           IPP   P L+  +SL SSPRS       +P        R+R MC++GG I+PRP D  LC
Sbjct: 35  IPP---PELD-NDSLASSPRSEYD---SQP--------RVRFMCTFGGRILPRPPDNQLC 94

Query: 73  YVCGETRIVVVDRHTSLSDLTARLSKTLLNGRP-FTLKYQLPNEDLDSLISVTTDEDLEN 132
           YV G+ R+V V RHT+ + L ++L+K  L+G+   ++KYQLPNEDLD+LISV+TDED+EN
Sbjct: 95  YVGGDNRMVAVHRHTTFASLLSKLAK--LSGKSNISVKYQLPNEDLDALISVSTDEDVEN 154

Query: 133 MIDEYDRTASNSSNPAAKPSRLRLFLF-------PIKPDVSQSIGPILESSTSSDDWFLN 192
           M+DEYDR A N  NP A  SRLRLFLF             + SI  +L+SS + + WFL+
Sbjct: 155 MMDEYDRVAQN-QNPRA--SRLRLFLFTKNVAGEEDNDSRASSISSLLDSSVNREQWFLD 214

Query: 193 ALN-GAGLLNRGFSDSASVNCLLGLDDDV------------GVNNLD--SGPREADGSQP 252
           ALN G+       S+  S      +  +V            G++N D  + P E     P
Sbjct: 215 ALNLGSSAAATAVSNGGSGRVFERVRSEVSSIVSEVPDYLFGLDNFDETAPPHELRDRDP 274

Query: 253 GSFGNGKGGKQ-DVHSVPDSPMIETTSSFGSTSSSP----SLANLPP 272
                 K  ++    S P SP  +  S +GSTSS+P    S   LPP
Sbjct: 275 ----RAKIQREVSTLSDPGSPRRDVPSPYGSTSSAPVMRISTPELPP 297

[Close]

BLAST of PI0002646 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 130.6 bits (327), Expect = 5.1e-30
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 0


Query: 22  NYPESLDSSPRSRNTDTWDEPLAP--------GPLAGRLRLMCSYGGHIVPRPHDKTLCY 81
           +YP+S DSSPRSR  + +D P  P           + +++ MCSYGG I PRPHD  L Y
Sbjct: 8   SYPDSTDSSPRSREIE-FDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTY 67

Query: 82  VCGETRIVVVDRHTSLSDLTARLSKTL----LNGRPFTLKYQLPNEDLDSLISVTTDEDL 141
           V GET+I+ VDR      L ++LS         G   T KYQLP EDLD+LISVT D+DL
Sbjct: 68  VNGETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDL 127

Query: 142 ENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSD-DWFLNALN 188
           E+M+ EYDR    SS    KP+R+RLFLFP     S   G   +SST SD D F+ ALN
Sbjct: 128 EHMMHEYDRLLRLSS----KPARMRLFLFP----ASSGFGS--QSSTQSDRDRFVEALN 175

[Close]

BLAST of PI0002646 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 130.2 bits (326), Expect = 6.6e-30
Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 22  NYPESLDSSPRSR-----NTDTWDEPLAPGPLAGRLRLMCSYGGHIVPRPHDKTLCYVCG 81
           +YP+S +SSPRSR     N   W++         +++LMCSYGG I PRPHD  L YV G
Sbjct: 8   SYPDSAESSPRSRDVEFENPSPWEDQQQQN---YKVKLMCSYGGKIQPRPHDNQLTYVNG 67

Query: 82  ETRIVVVDRHTSLSDLTARLSKTLL---NGRPFTLKYQLPNEDLDSLISVTTDEDLENMI 141
           +T+I+ VDR      L ++LS       +G   + KYQLP EDLD+LISVT DEDLE+M+
Sbjct: 68  DTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMM 127

Query: 142 DEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNAL 187
            EYDR    S+    KP+R+RLFLFP  P +S   G   E ST SD   LN +
Sbjct: 128 HEYDRLLRLST----KPARMRLFLFPSSP-ISGGFGS--EGSTKSDRDTLNPI 170

The following BLAST results are available for this feature:

BLAST of PI0002646 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002646 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVC4	0.0e+00	97.88	RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BF26	0.0e+00	97.88	RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 P...	[more]
A0A0A0KWH3	0.0e+00	97.88	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV...	[more]
A0A6J1GYH7	0.0e+00	89.03	PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4...	[more]
A0A6J1HQW4	0.0e+00	86.74	RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of PI0002646 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446641.1	0.0e+00	97.88	PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 R...	[more]
XP_004135079.1	0.0e+00	97.88	RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetica...	[more]
XP_038892018.1	0.0e+00	95.50	putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispi...	[more]
XP_022956700.1	0.0e+00	89.03	putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata]	[more]
XP_022966093.1	0.0e+00	86.74	RNA polymerase II degradation factor 1-like [Cucurbita maxima]	[more]

BLAST of PI0002646 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01190.1	2.1e-161	50.33	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G18230.1	1.4e-83	38.17	Octicosapeptide/Phox/Bem1p family protein	[more]
AT4G05150.1	2.2e-33	40.42	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G64430.1	5.1e-30	48.04	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G09620.1	6.6e-30	46.82	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 66..160 e-value: 2.0E-29 score: 113.7
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 69..159 e-value: 4.6E-17 score: 61.7
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 51..160 score: 13.286085
None	No IPR available	GENE3D	3.10.20.90		coord: 69..158 e-value: 1.2E-10 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31066:SF27	EXPRESSED PROTEIN	coord: 10..697
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 10..697
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 55..158 e-value: 6.38893E-48 score: 162.004
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 67..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002646.1	PI0002646.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity