PI0002640 (gene) Melon (PI 482460) v1

Overview


Name	PI0002640
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 15116579 .. 15117393 (+)
RNA-Seq Expression	PI0002640
Synteny	PI0002640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGACTCCTTTTCCCTTAACTCGAAAAAGAAAATGAAAAAGAAAAGACCACCTCCTATTCAATCTAATAGTCCAGCACCAATAAATGAAATTGGATCCAAGAATCAAAGTCTCCCAACTACCAACGACCCCCCAAAATTCAATATCTTCCATTAAACTTCATCTTTCTCTCTTCACCGTTTCATCACTCGTTCACCTCTCCATTGGACTTTCTTCTTCAAACACCATGGCTGCACTGTACACGCCATCCATTGAGACTATCATTCTCCTTCTCCTCCTCATCCTCATTCCTTCCGGCTTCACCGTTAATGACACCGCTTCCTTCGGCTCTTGCAATGGTAGCCACTCGAAGAAATGCCACCTTGTCAGAGACGATATCACCGACTACAAATACATGATGGAATCGGAGATGGGACGGATGCTGTTAGACTTCAATAAATACACAACACCACCAACTGGAACAGCCAACAAGCATTCGGTGAAATCCTGCGGCCGACCACCGCGGTACGACAGTTGTCTTGGCGAGAAAAGGCAAACGCCGCCACAGGGAAGATGTTATGTCTATAATAGAGTGCCTTGTGGGTAATGAAATGGAAAAAAAGTAGAAGAAAAGGACGATGAATTTGTTGTTAGAATTTGTGGGATGTGTTGTTAAGTGGATTGTGTAGGTTAAATTAATTTGGTTCTTTGTTGGAAGATGGATTTGGTTTTGTTGTGGTTGTTCGCGTGAATGAATTTGAAAATAATAATGTCTTGTGTGTTTAATTATAAATCAGTGTTATTTTACTCTATATTTTTGTGTGTTTTTGTAGGAA

mRNA sequence

TGGGACTCCTTTTCCCTTAACTCGAAAAAGAAAATGAAAAAGAAAAGACCACCTCCTATTCAATCTAATAGTCCAGCACCAATAAATGAAATTGGATCCAAGAATCAAAGTCTCCCAACTACCAACGACCCCCCAAAATTCAATATCTTCCATTAAACTTCATCTTTCTCTCTTCACCGTTTCATCACTCGTTCACCTCTCCATTGGACTTTCTTCTTCAAACACCATGGCTGCACTGTACACGCCATCCATTGAGACTATCATTCTCCTTCTCCTCCTCATCCTCATTCCTTCCGGCTTCACCGTTAATGACACCGCTTCCTTCGGCTCTTGCAATGGTAGCCACTCGAAGAAATGCCACCTTGTCAGAGACGATATCACCGACTACAAATACATGATGGAATCGGAGATGGGACGGATGCTGTTAGACTTCAATAAATACACAACACCACCAACTGGAACAGCCAACAAGCATTCGGTGAAATCCTGCGGCCGACCACCGCGGTACGACAGTTGTCTTGGCGAGAAAAGGCAAACGCCGCCACAGGGAAGATGTTATGTCTATAATAGAGTGCCTTGTGGGTAATGAAATGGAAAAAAAGTAGAAGAAAAGGACGATGAATTTGTTGTTAGAATTTGTGGGATGTGTTGTTAAGTGGATTGTGTAGGTTAAATTAATTTGGTTCTTTGTTGGAAGATGGATTTGGTTTTGTTGTGGTTGTTCGCGTGAATGAATTTGAAAATAATAATGTCTTGTGTGTTTAATTATAAATCAGTGTTATTTTACTCTATATTTTTGTGTGTTTTTGTAGGAA

Coding sequence (CDS)

ATGAAATTGGATCCAAGAATCAAAGTCTCCCAACTACCAACGACCCCCCAAAATTCAATATCTTCCATTAAACTTCATCTTTCTCTCTTCACCGTTTCATCACTCGTTCACCTCTCCATTGGACTTTCTTCTTCAAACACCATGGCTGCACTGTACACGCCATCCATTGAGACTATCATTCTCCTTCTCCTCCTCATCCTCATTCCTTCCGGCTTCACCGTTAATGACACCGCTTCCTTCGGCTCTTGCAATGGTAGCCACTCGAAGAAATGCCACCTTGTCAGAGACGATATCACCGACTACAAATACATGATGGAATCGGAGATGGGACGGATGCTGTTAGACTTCAATAAATACACAACACCACCAACTGGAACAGCCAACAAGCATTCGGTGAAATCCTGCGGCCGACCACCGCGGTACGACAGTTGTCTTGGCGAGAAAAGGCAAACGCCGCCACAGGGAAGATGTTATGTCTATAATAGAGTGCCTTGTGGGTAA

Protein sequence

MKLDPRIKVSQLPTTPQNSISSIKLHLSLFTVSSLVHLSIGLSSSNTMAALYTPSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMESEMGRMLLDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRVPCG

Homology

[Close]

BLAST of PI0002640 vs. ExPASy TrEMBL
Match: A0A5D3E3B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00600 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-47
Identity = 98/120 (81.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 48  MAALYTPSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYK-YMME 107
           MAAL TPSI TIIL LLLILI SGFTVNDT +  SCN SHSKKCHLVRDD+ DYK  MME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 108 SEMGRMLLDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRVPCG 167
            EMGRMLLDFNKYTTP TGTANK+S  SCGRPPRYDSCLGEKR TPPQ +CYVY RVPCG
Sbjct: 61  LEMGRMLLDFNKYTTPQTGTANKNSGGSCGRPPRYDSCLGEKRDTPPQEKCYVYKRVPCG 120

[Close]

BLAST of PI0002640 vs. ExPASy TrEMBL
Match: A0A0A0LCI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 48  MAALYTPSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMES 107
           MAAL TPSI TIILLLL  LIPSGFTVNDTA+  SCN SHSKKCHLVRDD+ DY++MMES
Sbjct: 1   MAALSTPSIGTIILLLL--LIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMES 60

Query: 108 EMGRML-LDFNKYTTPPTGTANKHSVK-SCGRPPRYDSCLGEKRQTPPQGRCYVYNR 163
           EMG ML ++++KY +PPT  ANK  VK  CGRPPRY+SCLG KR T  Q +C VY R
Sbjct: 61  EMGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of PI0002640 vs. ExPASy TrEMBL
Match: A0A5D3BZL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001310 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.4e-15
Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 54  PSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMESEMGRML 113
           P++  IIL+LL   I    TVN+TA    C G  S+ C L+ D+ +D +++ME++  RML
Sbjct: 8   PTMAIIILILLFNTIGCNTTVNETAP-EWCYG--SENC-LIGDESSDSEFLMETDTSRML 67

Query: 114 LDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRV-PC 166
           LDF    TP T   N+ SV  CGRPPRYDSC+GEKR       C V NR  PC
Sbjct: 68  LDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 116

[Close]

BLAST of PI0002640 vs. ExPASy TrEMBL
Match: A0A0A0KVZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.5e-14
Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 54  PSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMESEMGRML 113
           P++  +IL LL        TVN+T S   C G  S+ C LV D+  D +++ME+E  RML
Sbjct: 8   PTMAILILTLLFNPTRCNTTVNETTS-EWCYG--SENC-LVGDESLDSEFLMETETSRML 67

Query: 114 LDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRV-PC 166
           LDF    TP T   N+ SV  CGRPPRYDSC GE+RQ P    C V NR  PC
Sbjct: 68  LDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]

BLAST of PI0002640 vs. ExPASy TrEMBL
Match: A0A0A0KW62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.3e-12
Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 40  IGLSSSNTMAALYT-PSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDI 99
           +G   SN+MAA  T PS+  +I +LLL  I S   +NDT S   C+ +  + C LV D  
Sbjct: 1   MGRLPSNSMAATLTMPSMAFLITILLLNPIISNAGMNDTES-KWCDSTGLENC-LVGDLN 60

Query: 100 TDYKYMMESEMGRMLLD-FNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRC 159
           +  +++M +E   ML+D F  + TP    ANK SV  C RPPRYDSCLG KR  P    C
Sbjct: 61  SHSEFLMLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPC 120

Query: 160 YVYNRV-PC 166
              NRV PC
Sbjct: 121 STLNRVNPC 127

[Close]

BLAST of PI0002640 vs. NCBI nr
Match: KAA0032826.1 (hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK30382.1 hypothetical protein E5676_scaffold575G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 6.5e-47
Identity = 98/120 (81.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 48  MAALYTPSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYK-YMME 107
           MAAL TPSI TIIL LLLILI SGFTVNDT +  SCN SHSKKCHLVRDD+ DYK  MME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 108 SEMGRMLLDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRVPCG 167
            EMGRMLLDFNKYTTP TGTANK+S  SCGRPPRYDSCLGEKR TPPQ +CYVY RVPCG
Sbjct: 61  LEMGRMLLDFNKYTTPQTGTANKNSGGSCGRPPRYDSCLGEKRDTPPQEKCYVYKRVPCG 120

[Close]

BLAST of PI0002640 vs. NCBI nr
Match: KGN57776.1 (hypothetical protein Csa_010194 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.3e-34
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 48  MAALYTPSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMES 107
           MAAL TPSI TIILLLL  LIPSGFTVNDTA+  SCN SHSKKCHLVRDD+ DY++MMES
Sbjct: 1   MAALSTPSIGTIILLLL--LIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMES 60

Query: 108 EMGRML-LDFNKYTTPPTGTANKHSVK-SCGRPPRYDSCLGEKRQTPPQGRCYVYNR 163
           EMG ML ++++KY +PPT  ANK  VK  CGRPPRY+SCLG KR T  Q +C VY R
Sbjct: 61  EMGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of PI0002640 vs. NCBI nr
Match: KAA0042447.1 (hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK03509.1 hypothetical protein E5676_scaffold121G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-14
Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 54  PSIETIILLLLLILIPSGFTVNDTASFGSCNGSHSKKCHLVRDDITDYKYMMESEMGRML 113
           P++  IIL+LL   I    TVN+TA    C G  S+ C L+ D+ +D +++ME++  RML
Sbjct: 8   PTMAIIILILLFNTIGCNTTVNETAP-EWCYG--SENC-LIGDESSDSEFLMETDTSRML 67

Query: 114 LDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRCYVYNRV-PC 166
           LDF    TP T   N+ SV  CGRPPRYDSC+GEKR       C V NR  PC
Sbjct: 68  LDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 116

[Close]

BLAST of PI0002640 vs. NCBI nr
Match: KAG7011063.1 (hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 40  IGLSSSNTMAALYTPSIETIILLLLLILIP--SGFTVNDTASFGSCNGSHSKKCHLVRDD 99
           +G++S+   A L TPS+ TI+ ++LL+  P  S   +N TA+   C+G   + C L+ D 
Sbjct: 1   MGITSNTMAATLLTPSM-TILFIILLLNPPTISHAAINKTAA-EWCDG-RLENC-LIGDL 60

Query: 100 ITDYKYMMESEMGRMLLDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRC 159
            +D +++ME+E  RMLLDFN + TP T   +K S   C RPPRYDSCLG+K   P    C
Sbjct: 61  NSDSEFLMETETSRMLLDFNSFQTPNTNNPDKQSAPECNRPPRYDSCLGQKTSIPNPENC 120

Query: 160 YVYNRV-PC 166
              NRV PC
Sbjct: 121 DTRNRVNPC 125

[Close]

BLAST of PI0002640 vs. NCBI nr
Match: KAG6607065.1 (hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 40  IGLSSSNTMAALYTPSIETIILLLLLILIP--SGFTVNDTASFGSCNGSHSKKCHLVRDD 99
           +G++S+   A L TPS+ TI+ ++LL+  P  S   +N TA+   C+G   + C L+ D 
Sbjct: 1   MGITSNTMAATLLTPSM-TILFIILLLNPPTISHAAINKTAA-EWCDG-RLENC-LIGDL 60

Query: 100 ITDYKYMMESEMGRMLLDFNKYTTPPTGTANKHSVKSCGRPPRYDSCLGEKRQTPPQGRC 159
            +D +++ME+E  RMLLDFN + TP T   +K S   C RPPRYD CLG+K   P    C
Sbjct: 61  NSDSEFLMETETSRMLLDFNSFQTPNTNNPDKQSAPECNRPPRYDGCLGQKNIIPNPENC 120

Query: 160 YVYNRV-PC 166
              NRV PC
Sbjct: 121 DTRNRVNPC 125

The following BLAST results are available for this feature:

BLAST of PI0002640 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3B8	3.2e-47	81.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LCI8	3.1e-34	70.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1	[more]
A0A5D3BZL1	5.4e-15	46.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KVZ2	3.5e-14	47.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1	[more]
A0A0A0KW62	4.3e-12	44.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1	[more]

BLAST of PI0002640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032826.1	6.5e-47	81.67	hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK3038...	[more]
KGN57776.1	6.3e-34	70.09	hypothetical protein Csa_010194 [Cucumis sativus]	[more]
KAA0042447.1	1.1e-14	46.90	hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK0350...	[more]
KAG7011063.1	2.5e-14	43.41	hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607065.1	1.2e-13	42.64	hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0002640 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002640.1	PI0002640.1	mRNA