PI0002621 (gene) Melon (PI 482460) v1

Overview


Name	PI0002621
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4218 domain-containing protein
Location	chr11: 4838218 .. 4839069 (+)
RNA-Seq Expression	PI0002621
Synteny	PI0002621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAACCAAAGTATAGCTTTTTTTTGTTCTAGCATTTGTGATGGAAATGGAAGTTGAAAATGATGATTTGTTGTTTGCTGAGCTTACTAAAAGGATTTCGCTTCTCATTATGGACGATGACGAGCTTCCTATCGTTCATACGGTTTGTTTTACTTCCCTTGTTTAGCCTTTAAATGGTTTGTCTTTTTTCGCTTATATAGTTATTGTTAAACTTCAATTTGTGGACTGGCTTTTGAAATTGTGTTTGTTTGTTGTTTGAGAAGTCTATATATTGTTTATAATGTTTGTTTATGGACTACTAAGCACTTCTCAAAAACAAATGTAACAAATGTTAAACTAACATTTTAACACAAATTAAAATTTTATGGAAAAGTATAACTTTGATTGGGTATTTAGCATTGCAAAATTTTAGTGAGATTGAAAGTTTAGATACTTAAGAAGCTAAACTCACAATTCAAAAGATCTTTCAAGTTTTAGGGACCACACTTGTAACTTGACATATTGTTAATGTTTCAGAACTTTACTAGAACAGTACATGAACTTCAACCTAGGCAATTACCATTAATGGTGGATTACGAGAATGGCTTCGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACACGGTTGCCGCCACCAAAGAGGAAACAGAAGAATGCCATTGCTGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCGTCAACCGTCTCAAACGTATCATTGTAAGCCCAAAAAGGGTTAATCTCATCATCATTTCTAATTATTTCAAGTTTTAATTCTACATTAACATTTAGTTATTTAATAAATTCGTGTTTGATAGTGACATGTTGATAACGTCACTT

mRNA sequence

TATCAAACCAAAGTATAGCTTTTTTTTGTTCTAGCATTTGTGATGGAAATGGAAGTTGAAAATGATGATTTGTTGTTTGCTGAGCTTACTAAAAGGATTTCGCTTCTCATTATGGACGATGACGAGCTTCCTATCGTTCATACGAACTTTACTAGAACAGTACATGAACTTCAACCTAGGCAATTACCATTAATGGTGGATTACGAGAATGGCTTCGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACACGGTTGCCGCCACCAAAGAGGAAACAGAAGAATGCCATTGCTGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCGTCAACCGTCTCAAACGTATCATTGTAAGCCCAAAAAGGGTTAATCTCATCATCATTTCTAATTATTTCAAGTTTTAATTCTACATTAACATTTAGTTATTTAATAAATTCGTGTTTGATAGTGACATGTTGATAACGTCACTT

Coding sequence (CDS)

ATGGAAATGGAAGTTGAAAATGATGATTTGTTGTTTGCTGAGCTTACTAAAAGGATTTCGCTTCTCATTATGGACGATGACGAGCTTCCTATCGTTCATACGAACTTTACTAGAACAGTACATGAACTTCAACCTAGGCAATTACCATTAATGGTGGATTACGAGAATGGCTTCGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACACGGTTGCCGCCACCAAAGAGGAAACAGAAGAATGCCATTGCTGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCGTCAACCGTCTCAAACGTATCATTGTAAGCCCAAAAAGGGTTAA

Protein sequence

MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVRESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKKG

Homology

[Close]

BLAST of PI0002621 vs. ExPASy TrEMBL
Match: A0A0A0KGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G153490 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           MEMEVE+DDLLFAELT+RISLLIMDDDELPI HTNFTRTVH+L+PR+LPLM+DYENGFVR
Sbjct: 1   MEMEVESDDLLFAELTRRISLLIMDDDELPIAHTNFTRTVHQLRPRELPLMMDYENGFVR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPK 110
           ESKGTGVFIP RLPP KRKQKN  AGYRIKSENKRLN QPS TY+CKPK
Sbjct: 61  ESKGTGVFIPARLPPRKRKQKNVTAGYRIKSENKRLNGQPSPTYYCKPK 109

[Close]

BLAST of PI0002621 vs. ExPASy TrEMBL
Match: A0A5A7SW60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00710 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 3   MEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVRES 62
           MEVENDDLLFAELT+RISLLIMDDDELPIV+TNFTRTVH+L+PR+LPL +DYENGFVRES
Sbjct: 1   MEVENDDLLFAELTRRISLLIMDDDELPIVNTNFTRTVHQLRPRELPLTMDYENGFVRES 60

Query: 63  KGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRL--NRQPSQTYHCKPK 110
           KGTGVFIPTRLPPPKRKQKNA  GYRIKSENKRL  NRQPS  Y+CKPK
Sbjct: 61  KGTGVFIPTRLPPPKRKQKNATVGYRIKSENKRLNNNRQPSPMYYCKPK 109

[Close]

BLAST of PI0002621 vs. ExPASy TrEMBL
Match: A0A1S3C8R0 (uncharacterized protein LOC103497931 OS=Cucumis melo OX=3656 GN=LOC103497931 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 3   MEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVRES 62
           MEVENDDLLFAELT+RISLLIMDDDELPIV+TNFTRTVH+L+PR+LPL +DYENGFVRES
Sbjct: 1   MEVENDDLLFAELTRRISLLIMDDDELPIVNTNFTRTVHQLRPRELPLTMDYENGFVRES 60

Query: 63  KGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRL--NRQPSQTYHCKPK 110
           KGTGVFIPTRLPPPKRKQKNA  GYRIKSENKRL  NRQPS  Y+CKPK
Sbjct: 61  KGTGVFIPTRLPPPKRKQKNATVGYRIKSENKRLNNNRQPSPMYYCKPK 109

[Close]

BLAST of PI0002621 vs. ExPASy TrEMBL
Match: A0A6J1EQJ8 (uncharacterized protein LOC111436898 OS=Cucurbita moschata OX=3662 GN=LOC111436898 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.5e-40
Identity = 87/110 (79.09%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           ME EV +DDLLFAELT+RISLLIMDDDELP VHT+ +RT+H ++P QLPLMVDYENGFVR
Sbjct: 1   METEVNDDDLLFAELTRRISLLIMDDDELPSVHTDLSRTIHRVRPGQLPLMVDYENGFVR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKK 111
           ESKGTGVFIPTRLP PKRK +N + GYRIKSENKRLN QPS TY+ KPKK
Sbjct: 61  ESKGTGVFIPTRLPSPKRKHRN-VVGYRIKSENKRLNSQPSSTYYFKPKK 109

[Close]

BLAST of PI0002621 vs. ExPASy TrEMBL
Match: A0A6J1KEC6 (uncharacterized protein LOC111494227 OS=Cucurbita maxima OX=3661 GN=LOC111494227 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 84/110 (76.36%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           ME EV++DDLLFAELT+RISLLIMDDDELP VHT+ +RT+H ++P QLPLMVDY+NGFVR
Sbjct: 24  METEVDDDDLLFAELTRRISLLIMDDDELPSVHTDLSRTIHRVRPGQLPLMVDYKNGFVR 83

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKK 111
           ESKGTGVFIPTRLP PKRK +N + GYRIKS N RLN QPS TY+ KPKK
Sbjct: 84  ESKGTGVFIPTRLPSPKRKHRN-VVGYRIKSGNTRLNSQPSSTYYFKPKK 132

[Close]

BLAST of PI0002621 vs. NCBI nr
Match: XP_004149266.1 (uncharacterized protein LOC101220151 [Cucumis sativus] >KGN46966.1 hypothetical protein Csa_020778 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           MEMEVE+DDLLFAELT+RISLLIMDDDELPI HTNFTRTVH+L+PR+LPLM+DYENGFVR
Sbjct: 1   MEMEVESDDLLFAELTRRISLLIMDDDELPIAHTNFTRTVHQLRPRELPLMMDYENGFVR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPK 110
           ESKGTGVFIP RLPP KRKQKN  AGYRIKSENKRLN QPS TY+CKPK
Sbjct: 61  ESKGTGVFIPARLPPRKRKQKNVTAGYRIKSENKRLNGQPSPTYYCKPK 109

[Close]

BLAST of PI0002621 vs. NCBI nr
Match: XP_008458565.1 (PREDICTED: uncharacterized protein LOC103497931 [Cucumis melo] >KAA0033419.1 uncharacterized protein E6C27_scaffold111G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 4.1e-45
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 3   MEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVRES 62
           MEVENDDLLFAELT+RISLLIMDDDELPIV+TNFTRTVH+L+PR+LPL +DYENGFVRES
Sbjct: 1   MEVENDDLLFAELTRRISLLIMDDDELPIVNTNFTRTVHQLRPRELPLTMDYENGFVRES 60

Query: 63  KGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRL--NRQPSQTYHCKPK 110
           KGTGVFIPTRLPPPKRKQKNA  GYRIKSENKRL  NRQPS  Y+CKPK
Sbjct: 61  KGTGVFIPTRLPPPKRKQKNATVGYRIKSENKRLNNNRQPSPMYYCKPK 109

[Close]

BLAST of PI0002621 vs. NCBI nr
Match: XP_038875510.1 (uncharacterized protein LOC120067937 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 5.5e-42
Identity = 88/111 (79.28%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           MEM VENDDLLFAELT+RISLLIMDDDELPIVHT+FTRTVH+L+PRQ PLM+DYENGF+R
Sbjct: 1   MEMGVENDDLLFAELTRRISLLIMDDDELPIVHTDFTRTVHQLRPRQFPLMMDYENGFIR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKKG 112
           ESKGTGVFIP RLPPPKRKQ+ ++AGYRIK++NK L+ QPS  Y+ +PKKG
Sbjct: 61  ESKGTGVFIPARLPPPKRKQR-SVAGYRIKTKNKSLDHQPSSMYYWEPKKG 110

[Close]

BLAST of PI0002621 vs. NCBI nr
Match: XP_022930457.1 (uncharacterized protein LOC111436898 [Cucurbita moschata])

HSP 1 Score: 174.5 bits (441), Expect = 5.2e-40
Identity = 87/110 (79.09%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           ME EV +DDLLFAELT+RISLLIMDDDELP VHT+ +RT+H ++P QLPLMVDYENGFVR
Sbjct: 1   METEVNDDDLLFAELTRRISLLIMDDDELPSVHTDLSRTIHRVRPGQLPLMVDYENGFVR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKK 111
           ESKGTGVFIPTRLP PKRK +N + GYRIKSENKRLN QPS TY+ KPKK
Sbjct: 61  ESKGTGVFIPTRLPSPKRKHRN-VVGYRIKSENKRLNSQPSSTYYFKPKK 109

[Close]

BLAST of PI0002621 vs. NCBI nr
Match: XP_023521928.1 (uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 8.8e-40
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MEMEVENDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHELQPRQLPLMVDYENGFVR 60
           ME EV++DDLLFAELT+RISLLIMDDDE P VHT+ +RT+H ++P QLPLMVDYENGFVR
Sbjct: 1   METEVDDDDLLFAELTRRISLLIMDDDEFPSVHTDLSRTIHRVRPGQLPLMVDYENGFVR 60

Query: 61  ESKGTGVFIPTRLPPPKRKQKNAIAGYRIKSENKRLNRQPSQTYHCKPKK 111
           ESKGTGVFIPTRLP PKRK +N + GYRIKSENKRLN QPS TY+ KPKK
Sbjct: 61  ESKGTGVFIPTRLPSPKRKHRN-VVGYRIKSENKRLNSQPSSTYYFKPKK 109

[Close]

BLAST of PI0002621 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 1  MEMEVE-NDDLLFAELTKRISLLIMDDDELPIVHTNFTRTVHEL-----QPRQLPLMVDY 60
          M ME+E +DD+ FA+++K+++LLI D+DE   +  + + +   L     Q    P M+  
Sbjct: 1  MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYN 60

Query: 61 EN---GFVRESKGTGVFIPTRLPPPKRKQKN 83
          E      +RESKGTGVFIP R   P+RK  +
Sbjct: 61 EQINYNVIRESKGTGVFIP-RSSQPRRKHNH 90

[Close]

BLAST of PI0002621 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.6e-05
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 1   MEMEVE-NDDLLFAELTKRISLLIMDDDE-LPIVHTNFTRTVHELQP------RQLPLMV 60
           M ME+E +DD+ FA+++K+ISLLIMD+DE L  V  + + +    Q       +  P M 
Sbjct: 1   MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRGGYQTAPYMY 60

Query: 61  DYENGFVRESKGTGVFIPTRLPPPKR----KQKNAIAGYRIKSENK-RLNRQPSQTYH 106
             E     +SKGTGVFIP    P +R    +++   + +  K ++    NRQ  Q  H
Sbjct: 61  QQE-----QSKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQHSLHQNRQEYQQNH 113

The following BLAST results are available for this feature:

BLAST of PI0002621 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGT1	1.0e-46	87.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G153490 PE=4 SV=1	[more]
A0A5A7SW60	2.0e-45	87.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C8R0	2.0e-45	87.16	uncharacterized protein LOC103497931 OS=Cucumis melo OX=3656 GN=LOC103497931 PE=...	[more]
A0A6J1EQJ8	2.5e-40	79.09	uncharacterized protein LOC111436898 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]
A0A6J1KEC6	1.4e-38	76.36	uncharacterized protein LOC111494227 OS=Cucurbita maxima OX=3661 GN=LOC111494227...	[more]

BLAST of PI0002621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149266.1	2.2e-46	87.16	uncharacterized protein LOC101220151 [Cucumis sativus] >KGN46966.1 hypothetical ...	[more]
XP_008458565.1	4.1e-45	87.16	PREDICTED: uncharacterized protein LOC103497931 [Cucumis melo] >KAA0033419.1 unc...	[more]
XP_038875510.1	5.5e-42	79.28	uncharacterized protein LOC120067937 [Benincasa hispida]	[more]
XP_022930457.1	5.2e-40	79.09	uncharacterized protein LOC111436898 [Cucurbita moschata]	[more]
XP_023521928.1	8.8e-40	78.18	uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0002621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06070.1	2.3e-06	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19190.1	2.6e-05	34.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..111
None	No IPR available	PANTHER	PTHR34956:SF2	OS05G0397300 PROTEIN	coord: 1..96
None	No IPR available	PANTHER	PTHR34956	OS05G0397300 PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002621.1	PI0002621.1	mRNA