PI0002614 (gene) Melon (PI 482460) v1

Overview
NamePI0002614
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 5468617 .. 5469076 (+)
RNA-Seq ExpressionPI0002614
SyntenyPI0002614
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTAGAATTTCCTTTGATTGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGATTGGCATTACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAAGCAATTCGATTCTCCACTGAAAAGCCCGAAAAAGATCCATTATCATCATCGATCAAAAACACAATGTTCATCAATAAAACGAAGACCCAAAACCAGCAAATTCTGCCCATTCTGGAGTGCAGCATATCAGTTTTGAATGATCTTTCTTTCTGTATGTAAAGTTTATAACATACTTATATGAACAAGCATCTCTGGTTAGTCTACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGAGAGAGACAGAGAGAAAGACATTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

mRNA sequence

ATGAAATTAGAATTTCCTTTGATTGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGATTGGCATTACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAAGCAATTCGATTCTCCACTGAAAAGCCCGAAAAAGATCCATTATCATCATCGATCAAAAACACAATCATCTCTGGTTAGTCTACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGAGAGAGACAGAGAGAAAGACATTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

Coding sequence (CDS)

ATGAAATTAGAATTTCCTTTGATTGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGATTGGCATTACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAAGCAATTCGATTCTCCACTGAAAAGCCCGAAAAAGATCCATTATCATCATCGATCAAAAACACAATCATCTCTGGTTAGTCTACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGAGAGAGACAGAGAGAAAGACATTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

Protein sequence

MKLEFPLIGKLANLNMNRGGSDWHYHHRTPCLFNLLTNSYTQKKQFDSPLKSPKKIHYHHRSKTQSSLVSLLGYATNSPEIELLAAAIRMQKDRERDREKDIVCPESHKQAL
Homology
[Close]
BLAST of PI0002614 vs. ExPASy TrEMBL
Match: A0A0A0KD93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367160 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0 

Query: 1   MKLEFP-------LIGKLANLNMNRGGSDWHYHHRTPCLFNLLTNSYTQKKQFDSPLKSP 60
           MKL+ P       LIGKLANLNMNRGGS   YHHRTPCLFNLLTNSYTQK+QFDSP +SP
Sbjct: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60

Query: 61  KKIHYHHRSK--------TQSSLVSLLGYATNSPEIELLAAAIRMQKDRERDREKDIVCP 113
           KKI      K         Q+SLVS LGYATNSPEIELLAAAIRMQKDR+RDRE+D+VCP
Sbjct: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120

[Close]
BLAST of PI0002614 vs. NCBI nr
Match: KGN47670.1 (hypothetical protein Csa_018248 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 5.8e-39
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0 

Query: 1   MKLEFP-------LIGKLANLNMNRGGSDWHYHHRTPCLFNLLTNSYTQKKQFDSPLKSP 60
           MKL+ P       LIGKLANLNMNRGGS   YHHRTPCLFNLLTNSYTQK+QFDSP +SP
Sbjct: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60

Query: 61  KKIHYHHRSK--------TQSSLVSLLGYATNSPEIELLAAAIRMQKDRERDREKDIVCP 113
           KKI      K         Q+SLVS LGYATNSPEIELLAAAIRMQKDR+RDRE+D+VCP
Sbjct: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120

The following BLAST results are available for this feature:
BLAST of PI0002614 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002614 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD932.8e-3972.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367160 PE=4 SV=1[more]
BLAST of PI0002614 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47670.15.8e-3972.44hypothetical protein Csa_018248 [Cucumis sativus][more]
BLAST of PI0002614 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002614.1PI0002614.1mRNA