PI0002591 (gene) Melon (PI 482460) v1

Overview


Name	PI0002591
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 11504160 .. 11504417 (-)
RNA-Seq Expression	PI0002591
Synteny	PI0002591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACTACCATCAATCGCAACACGATCAGCTCGCATCTGAAGTAGCGAGCCTAAAGGAGCAAAACAAGGCGATGGTGAGTTTGATCAAGAAGGCTTCCTCGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATCCATGCGGCCATCACAAGCCTCGTGCCTAAGCCTTCCATTCCACCTGAATTCGAAGAACCCCTCTCCGATAATGAAGTGGACACCGTGGCAGTACCTTCCGAAACGCGACTATAA

mRNA sequence

ATGGGCAACTACCATCAATCGCAACACGATCAGCTCGCATCTGAAGTAGCGAGCCTAAAGGAGCAAAACAAGGCGATGGTGAGTTTGATCAAGAAGGCTTCCTCGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATCCATGCGGCCATCACAAGCCTCGTGCCTAAGCCTTCCATTCCACCTGAATTCGAAGAACCCCTCTCCGATAATGAAGTGGACACCGTGGCAGTACCTTCCGAAACGCGACTATAA

Coding sequence (CDS)

ATGGGCAACTACCATCAATCGCAACACGATCAGCTCGCATCTGAAGTAGCGAGCCTAAAGGAGCAAAACAAGGCGATGGTGAGTTTGATCAAGAAGGCTTCCTCGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATCCATGCGGCCATCACAAGCCTCGTGCCTAAGCCTTCCATTCCACCTGAATTCGAAGAACCCCTCTCCGATAATGAAGTGGACACCGTGGCAGTACCTTCCGAAACGCGACTATAA

Protein sequence

MGNYHQSQHDQLASEVASLKEQNKAMVSLIKKASSRSDRQYKSMMNYIHAAITSLVPKPSIPPEFEEPLSDNEVDTVAVPSETRL

Homology

[Close]

BLAST of PI0002591 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 10  DQLASEVASLKEQNKA-------MVSLIKKASSRSDRQYKSMMNYIHAAITSLVPKPSIP 69
           +++ S++A LK QN+A       M + IK+AS  ++ Q +++MNYIH  I SLVP P  P
Sbjct: 130 EKIESDIAMLKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFP 189

Query: 70  PEFEEPLSDNEVDTVAV--PSETR 85
           PE EEPL++ E    A   PSE R
Sbjct: 190 PELEEPLTEVEPGPCAAVEPSEPR 213

[Close]

BLAST of PI0002591 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 8.3e-06
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 10  DQLASEVASLKEQNKA-------MVSLIKKASSRSDRQYKSMMNYIHAAITSLVPKPSIP 69
           +++ S++A LK QN+A       M + IK+AS  ++ Q +++MNYIH  I SLVP P  P
Sbjct: 130 EKIESDIAMLKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFP 189

Query: 70  PEFEEPLSDNEVDTVAV--PSETR 85
           PE EEPL++ E    A   PSE R
Sbjct: 190 PELEEPLTEVEPGPCAAVEPSEPR 213

The following BLAST results are available for this feature:

BLAST of PI0002591 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKU1	4.0e-06	44.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0002591 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067817.1	8.3e-06	44.05	hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]	[more]

BLAST of PI0002591 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002591.1	PI0002591.1	mRNA