PI0002484 (gene) Melon (PI 482460) v1

Overview


Name	PI0002484
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	nuclear pore complex protein NUP50A-like
Location	chr01: 27539097 .. 27540496 (-)
RNA-Seq Expression	PI0002484
Synteny	PI0002484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCCGGGCTTGACGACGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTGCTAGCCACAAGAAGAATGGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCCTTTGCTGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTAAATGCGATACAGAGGCAGCTGGTGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGCGACTCAAAAGATGGGGATCATAGTGATGAGCCAGTCAAATGTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTCTGAAAGCAATAAGATTGAAAATGAAGAACCAGTGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTGGTGATAAGAATGAAGACGAGGATCCTGCAAGAGGTGATAAGAATGAAAATGAAAAACCCAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGAACAAGAAAAAAAAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCAAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCTCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATCGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACGAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCTAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAGAGGTATCACCTTTGCCTGCATGAACAGCACCAGCGATGGGAAGGATGGTCTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTCGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAACTCTCCTTAA

mRNA sequence

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCCGGGCTTGACGACGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTGCTAGCCACAAGAAGAATGGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCCTTTGCTGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTAAATGCGATACAGAGGCAGCTGGTGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGCGACTCAAAAGATGGGGATCATAGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTCTGAAAGCAATAAGATTGAAAATGAAGAACCAGTGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTGGTGATAAGAATGAAGACGAGGATCCTGCAAGAGGTGATAAGAATGAAAATGAAAAACCCAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGAACAAGAAAAAAAAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCAAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCTCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATCGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACGAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCTAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAGAGGTATCACCTTTGCCTGCATGAACAGCACCAGCGATGGGAAGGATGGTCTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTCGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAACTCTCCTTAA

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCCGGGCTTGACGACGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTGCTAGCCACAAGAAGAATGGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCCTTTGCTGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTAAATGCGATACAGAGGCAGCTGGTGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGCGACTCAAAAGATGGGGATCATAGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTCTGAAAGCAATAAGATTGAAAATGAAGAACCAGTGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTGGTGATAAGAATGAAGACGAGGATCCTGCAAGAGGTGATAAGAATGAAAATGAAAAACCCAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGAACAAGAAAAAAAAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCAAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCTCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATCGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACGAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCTAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAGAGGTATCACCTTTGCCTGCATGAACAGCACCAGCGATGGGAAGGATGGTCTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTCGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAACTCTCCTTAA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGSTASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMGIIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKTGNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTSDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP

Homology

[Close]

BLAST of PI0002484 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-84
Identity = 218/467 (46.68%), Postives = 300/467 (64.24%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDDD+D +E E+GTFK+AS+EVLA+RR+V+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKM 120
             ++AP  +SNPFAGI+LVP T    + A     T A         A  K  P EA    
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT----APASTPVGTNA-------PLAESKLAPAEA---- 120

Query: 121 GIIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKTGNEELVRDAE 180
             + +   K   +++   V S+     V D +  E+ K ++++     K+ + ++     
Sbjct: 121 --VVEDNQKASDIEEGDEVDSKKV--DVKDAVGEETEKTKDKDDNHCGKSADVQVA---- 180

Query: 181 KESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENEENKEDKSEGE 240
             +E  + VS D N   +   G  ++ + P E      K++G  + ++ E+      E +
Sbjct: 181 -ATEVAQMVSCDTNVCNNAVEG-TDQTDFPLE------KDSGGDQAEKKEKEGNGIEEAD 240

Query: 241 PSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKD---GVGLTTSFGLSNNGS 300
            + +    +SFQQ SS++NAFTGLA T  S S+FSFG + +D   G G    FGL ++ S
Sbjct: 241 KNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGSTGTGSLFGFGLPSSNS 300

Query: 301 SALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGE 360
           S++FG +GSSI+ KSE SGFP  QEV+ ETGEENEKV F+ADSI+FE++DG WKERGKGE
Sbjct: 301 SSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSIMFEYLDGGWKERGKGE 360

Query: 361 LKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTSDGKDGL 420
           LKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL NMDK+GITFAC+NS S+GK+GL
Sbjct: 361 LKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKGITFACVNSVSEGKEGL 420

Query: 421 STFGVKFKDVSIVEEFRAAVTEHK--------GKASSTVLKTPENSP 454
           STF +KFKD +IVEEFR A+ +HK         + S+  LKTPENSP
Sbjct: 421 STFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPENSP 435

[Close]

BLAST of PI0002484 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.7e-82
Identity = 221/484 (45.66%), Postives = 299/484 (61.78%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDDEDVSEQETGTFKRASEEVLATRRMVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DDDED S  E+GTF  AS+EVLA+RR+++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEV---------KCDTEAAGEKAGSDEANGK 120
              S  + P+SNPF GIRLVP T  + S A           K +T A G    + E +G 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDG- 120

Query: 121 DIPHEATQKMGIIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
               ++ +K   I  +V K +      +  ++  I   +  +    N +E     GG   
Sbjct: 121 ----DSKEKSDAI-DAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVEG----GGAVN 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETG----EQEK 240
            NE    D  K +   E  +G++   +D      N N    EG++   K+TG    E+E 
Sbjct: 181 KNE----DEIKTTMVTEVAAGEETVKDD------NNNSNTVEGSDCVVKDTGGNQTEKEG 240

Query: 241 KENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG--- 300
           KE + N++ +  G    ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G   
Sbjct: 241 KEGDGNEDTEKNG----DSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTG 300

Query: 301 ---VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVAVETGEENEKVVFN 360
                 + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+VETGEENEK  F 
Sbjct: 301 SGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFT 360

Query: 361 ADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNM 420
           ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  M
Sbjct: 361 ADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKM 420

Query: 421 DKRGITFACMNSTSDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKTP 454
           DK+GITFAC+NS SD KDGLST  +KFKD ++VEEFRA + EHK    S       LKTP
Sbjct: 421 DKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTP 460

[Close]

BLAST of PI0002484 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-12
Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 315  PSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRAR 374
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +    TG  R+LMR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 375  GNYRLILNASLYPDMKLT----NMDKRGITFACMNSTSDGKDGLSTFGVKFKDVSIVEEF 434
              +++  N ++  D+ +     + DK+ + +A  N  +D +  L  F V+FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWAA-NDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 435  RAAVTEHKGKASS 444
            R A T+    A S
Sbjct: 1435 RVAFTKASEAAKS 1445

[Close]

BLAST of PI0002484 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.7e-223
Identity = 435/466 (93.35%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of PI0002484 vs. ExPASy TrEMBL
Match: A0A5D3BX12 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002470 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.7e-223
Identity = 435/466 (93.35%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of PI0002484 vs. ExPASy TrEMBL
Match: A0A0A0KAD0 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 6.9e-222
Identity = 432/466 (92.70%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAAGEKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTV SESAISKVDDNLVSESNKIENEEPVGGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDEC SG+KNED DP RGDKNE+E+PSEGNEIQNKETGE EK E+E
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
           +DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of PI0002484 vs. ExPASy TrEMBL
Match: A0A5A7UW04 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00030 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 8.2e-215
Identity = 420/451 (93.13%), Postives = 424/451 (94.01%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 439
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of PI0002484 vs. ExPASy TrEMBL
Match: A0A1S3CHQ9 (nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 8.2e-215
Identity = 422/457 (92.34%), Postives = 426/457 (93.22%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASST 445
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of PI0002484 vs. NCBI nr
Match: TYK04047.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 783.9 bits (2023), Expect = 7.6e-223
Identity = 435/466 (93.35%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of PI0002484 vs. NCBI nr
Match: XP_008462135.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008462136.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_016902854.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 7.6e-223
Identity = 435/466 (93.35%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of PI0002484 vs. NCBI nr
Match: XP_011659558.1 (nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical protein Csa_016470 [Cucumis sativus])

HSP 1 Score: 779.6 bits (2012), Expect = 1.4e-221
Identity = 432/466 (92.70%), Postives = 439/466 (94.21%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAAGEKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTV SESAISKVDDNLVSESNKIENEEPVGGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDEC SG+KNED DP RGDKNE+E+PSEGNEIQNKETGE EK E+E
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 454
           +DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of PI0002484 vs. NCBI nr
Match: XP_008462138.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo])

HSP 1 Score: 756.1 bits (1951), Expect = 1.7e-214
Identity = 422/457 (92.34%), Postives = 426/457 (93.22%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASST 445
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of PI0002484 vs. NCBI nr
Match: KAA0059280.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 756.1 bits (1951), Expect = 1.7e-214
Identity = 420/451 (93.13%), Postives = 424/451 (94.01%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRR+VKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKMG-- 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE TQK G  
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 -----------IIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
                        AKSVPKVQPVDQNSTVLSESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENE 240
           GNEELVRDAEKESENDECVS DKNEDE PARGDKNENE+PSEGNEIQNKETGEQEK ENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 SDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 439
            DGKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of PI0002484 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 315.1 bits (806), Expect = 9.3e-86
Identity = 218/467 (46.68%), Postives = 300/467 (64.24%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRMVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDDD+D +E E+GTFK+AS+EVLA+RR+V+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENSGSVAEVKCDTEAAGEKAGSDEANGKDIPHEATQKM 120
             ++AP  +SNPFAGI+LVP T    + A     T A         A  K  P EA    
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT----APASTPVGTNA-------PLAESKLAPAEA---- 120

Query: 121 GIIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKTGNEELVRDAE 180
             + +   K   +++   V S+     V D +  E+ K ++++     K+ + ++     
Sbjct: 121 --VVEDNQKASDIEEGDEVDSKKV--DVKDAVGEETEKTKDKDDNHCGKSADVQVA---- 180

Query: 181 KESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETGEQEKKENEENKEDKSEGE 240
             +E  + VS D N   +   G  ++ + P E      K++G  + ++ E+      E +
Sbjct: 181 -ATEVAQMVSCDTNVCNNAVEG-TDQTDFPLE------KDSGGDQAEKKEKEGNGIEEAD 240

Query: 241 PSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKD---GVGLTTSFGLSNNGS 300
            + +    +SFQQ SS++NAFTGLA T  S S+FSFG + +D   G G    FGL ++ S
Sbjct: 241 KNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGSTGTGSLFGFGLPSSNS 300

Query: 301 SALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGE 360
           S++FG +GSSI+ KSE SGFP  QEV+ ETGEENEKV F+ADSI+FE++DG WKERGKGE
Sbjct: 301 SSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSIMFEYLDGGWKERGKGE 360

Query: 361 LKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTSDGKDGL 420
           LKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL NMDK+GITFAC+NS S+GK+GL
Sbjct: 361 LKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKGITFACVNSVSEGKEGL 420

Query: 421 STFGVKFKDVSIVEEFRAAVTEHK--------GKASSTVLKTPENSP 454
           STF +KFKD +IVEEFR A+ +HK         + S+  LKTPENSP
Sbjct: 421 STFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPENSP 435

[Close]

BLAST of PI0002484 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 306.6 bits (784), Expect = 3.3e-83
Identity = 221/484 (45.66%), Postives = 299/484 (61.78%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDDEDVSEQETGTFKRASEEVLATRRMVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DDDED S  E+GTF  AS+EVLA+RR+++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEV---------KCDTEAAGEKAGSDEANGK 120
              S  + P+SNPF GIRLVP T  + S A           K +T A G    + E +G 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDG- 120

Query: 121 DIPHEATQKMGIIAKSVPKVQPVDQNSTVLSESAISKVDDNLVSESNKIENEEPVGGDKT 180
               ++ +K   I  +V K +      +  ++  I   +  +    N +E     GG   
Sbjct: 121 ----DSKEKSDAI-DAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVEG----GGAVN 180

Query: 181 GNEELVRDAEKESENDECVSGDKNEDEDPARGDKNENEKPSEGNEIQNKETG----EQEK 240
            NE    D  K +   E  +G++   +D      N N    EG++   K+TG    E+E 
Sbjct: 181 KNE----DEIKTTMVTEVAAGEETVKDD------NNNSNTVEGSDCVVKDTGGNQTEKEG 240

Query: 241 KENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG--- 300
           KE + N++ +  G    ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G   
Sbjct: 241 KEGDGNEDTEKNG----DSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTG 300

Query: 301 ---VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVAVETGEENEKVVFN 360
                 + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+VETGEENEK  F 
Sbjct: 301 SGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFT 360

Query: 361 ADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNM 420
           ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  M
Sbjct: 361 ADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKM 420

Query: 421 DKRGITFACMNSTSDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKTP 454
           DK+GITFAC+NS SD KDGLST  +KFKD ++VEEFRA + EHK    S       LKTP
Sbjct: 421 DKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTP 460

[Close]

BLAST of PI0002484 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 49.3 bits (116), Expect = 9.5e-06
Identity = 36/125 (28.80%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 317 MQEVAVETGEENEKVVFNADSILFEF--IDGSWKERGKGELKVNVPTSGTGRGRILMRAR 376
           ++EVAV TGEE+E  V +  S ++ F      WKERG G +K+ +    TG+ R++MR  
Sbjct: 33  LEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKL-LKHKETGKVRLVMRQS 92

Query: 377 GNYRLILNASLYPDMKLTNMDKRGITFACMNSTSDGKDGL---STFGVKFKDVSIVEEFR 436
              ++  N  +   M +   +  G   +C+   +D  DG      F ++F  +   + F 
Sbjct: 93  KTLKICANHLISSGMSV--QEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFM 152

The following BLAST results are available for this feature:

BLAST of PI0002484 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	1.3e-84	46.68	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	4.7e-82	45.66	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	3.0e-12	34.59	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]

BLAST of PI0002484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3Q0	3.7e-223	93.35	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BX12	3.7e-223	93.35	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KAD0	6.9e-222	92.70	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4...	[more]
A0A5A7UW04	8.2e-215	93.13	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CHQ9	8.2e-215	92.34	nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of PI0002484 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04047.1	7.6e-223	93.35	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008462135.1	7.6e-223	93.35	PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008...	[more]
XP_011659558.1	1.4e-221	92.70	nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical p...	[more]
XP_008462138.1	1.7e-214	92.34	PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo]	[more]
KAA0059280.1	1.7e-214	93.13	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of PI0002484 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	9.3e-86	46.68	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	3.3e-83	45.66	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT5G58590.1	9.5e-06	28.80	RAN binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 311..437 e-value: 9.9E-18 score: 74.9
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 322..437 e-value: 4.0E-17 score: 62.6
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 314..443 score: 18.246458
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 12..73 e-value: 2.2E-15 score: 57.0
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 305..449 e-value: 8.8E-35 score: 121.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..453
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 1..453
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 324..441 e-value: 1.5476E-65 score: 204.22
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 314..441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002484.1	PI0002484.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity