PI0002398 (gene) Melon (PI 482460) v1

Overview
NamePI0002398
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like
Locationchr01: 28040735 .. 28042027 (+)
RNA-Seq ExpressionPI0002398
SyntenyPI0002398
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTAAAGTCTTGGATGATCTTCAGATTATTGGTACAGTTTTAGAGGACCAAGATTACTTGGAGAAGCTAACTAAGTTACAGGGTTACCTCGATGAGGTGAAACTTCTGCCTATTAGTTTCAATCTTGAAATGAAACGATAGTTGTTACTGCATTTTCCTCATGGTCATGGAATAGCTGTTCTTCAATCAATTTATCATAACTTGCTTGCTTATTGCTGGATGGCTTATTAGTTAGGCAATTTCTTATCAATATGATTTTGAGTTGTGTAATTTCTTAGTGCAGCCAAAAAATTGCGTGTCTTTTCTCCTAGTGCAGCGATGAACAAGAATTAAGGAAACTAGAAAACGATAGAAGATAGCTTAATCTAGAAATAAGAAATAAGGAAACAAGAAATAAGTAATGTACTATCAATTTTTAACAGTTTTGGTATCTTTTCAAGGGTTGTTCTTTGATTGGAAAAAATGCTTTTCTAGATAGTATTCTCTTTATCGTTCATAAAGAGGAGGTTAGGGTGTAGTTTGTTGGTTTGTTTGCCTAAAAAAAAGGTATATATTAGGCAAACAAAAAAAAAGTATGTATATATAATGAGTAAAGAAATGAAAAGAATGAGTAAAGAATCACATCCTTACCTTTCTATTTGGAACTTGTGAGTCTTGTAGACTTTTACATGTCTTCTCCTTCACTTACTATCATAAAGATTGGTCTGGATTTTGATTATATGTATCTACAGCTCGTGCAGATTTATTATTGTTAGAACAACTTGAATGTGTTTTCTGGTACTTCGAATGATCATACATAGGTTTTGCTAGGGTTAGAGGAGTGCACTATACATAAACTCTCTAGCTCCAGAGGCTCTACTGTAATCTAAAATTTAACATTTTCTCTCTAATAACAAAACTGCTCTTCCTCCGTCCATGGATATAGCTAACTCACTGTAAGCGAATCACATAAATCTCGATTTTGATTCTCTGCAGTTTTAGTTTTCTTTTCATCTTAAAAAATGATGGAACCAAAACAAAGTTCCGTTTAAACTTGACTAATTGATTGAATGAACATTTGTTTCCAAGATTCTTAATCTGTAAAGCAATAATGTTCTTATAAATCATTATTTTGATGTCTGAGTTATAACCCTTAAGCTCGGTGGTTCATGTTCCATTCAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGATGTTTTAGAAGTGGCATTGAACTCCATCTCATCCCTTATTACCATCCTCTACTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

mRNA sequence

ATGGAAGCTAAAGTCTTGGATGATCTTCAGATTATTGGTACAGTTTTAGAGGACCAAGATTACTTGGAGAAGCTAACTAAGTTACAGGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGATGTTTTAGAAGTGGCATTGAACTCCATCTCATCCCTTATTACCATCCTCTACTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Coding sequence (CDS)

ATGGAAGCTAAAGTCTTGGATGATCTTCAGATTATTGGTACAGTTTTAGAGGACCAAGATTACTTGGAGAAGCTAACTAAGTTACAGGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGATGTTTTAGAAGTGGCATTGAACTCCATCTCATCCCTTATTACCATCCTCTACTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Protein sequence

MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSSSTKLHSSL
Homology
[Close]
BLAST of PI0002398 vs. ExPASy Swiss-Prot
Match: Q9C9K3 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-07
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + +   +EDQDY+ K+ KLQ YLD+V+ IV   CSQDVL+ AL+ ++S+  +L ++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

[Close]
BLAST of PI0002398 vs. ExPASy Swiss-Prot
Match: Q9SYP2 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.9e-07
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + +   +EDQDY+ ++ KLQ YLD+V+ IV   CSQDVL+ AL+ ++S+  +L ++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

[Close]
BLAST of PI0002398 vs. ExPASy Swiss-Prot
Match: P21342 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum OX=4113 GN=PFP-ALPHA PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-07
Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + +   +EDQDY+ ++ KLQ YLD+V+ IV   CSQDVL+ AL++++S+  IL  +SS
Sbjct: 549 DAKAVSLCVEDQDYIGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISS 608

Query: 68  STKL 72
            + +
Sbjct: 609 PSSV 612

[Close]
BLAST of PI0002398 vs. ExPASy Swiss-Prot
Match: Q41140 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis OX=3988 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + I   +EDQDY+ ++ KLQ YLD+V+ IV   CSQ+VL+ AL+ ++S+  +L +MSS
Sbjct: 549 DAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSS 608

Query: 68  ST 70
           ++
Sbjct: 609 TS 610

[Close]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match: A0A0A0KAL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-26
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEK+TKLQGYLDEVKKIVSESCSQ+VLE+AL+SISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILYSMSSSTKLHSSL 76
          IL SMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match: A0A5A7UXI5 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00720 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEK+TKLQGYLDEVKKIVSESCSQ+VLEVALNSISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILYSMSSSTKLHSSL 76
          IL SMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match: A0A1S4E4F9 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo OX=3656 GN=LOC103500631 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEK+TKLQGYLDEVKKIVSESCSQ+VLEVALNSISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILYSMSSSTKLHSSL 76
          IL SMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match: A0A6J1B674 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110424558 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-07
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 17  EDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSSSTKLHSSL 76
           +D+D++++L + Q Y D VK++V   CSQDVL+VALNS+SSL++IL  MSSS K HSSL
Sbjct: 61  QDEDHIKRLKEFQAYFDMVKRMVKPGCSQDVLKVALNSMSSLVSILTYMSSSPKPHSSL 119

[Close]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match: A0A6J1B6J4 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X2 OS=Herrania umbratica OX=108875 GN=LOC110424558 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-07
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 17  EDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSSSTKLHSSL 76
           +D+D++++L + Q Y D VK++V   CSQDVL+VALNS+SSL++IL  MSSS K HSSL
Sbjct: 51  QDEDHIKRLKEFQAYFDMVKRMVKPGCSQDVLKVALNSMSSLVSILTYMSSSPKPHSSL 109

[Close]
BLAST of PI0002398 vs. NCBI nr
Match: KGN45427.1 (hypothetical protein Csa_016056 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 8.3e-26
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEK+TKLQGYLDEVKKIVSESCSQ+VLE+AL+SISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILYSMSSSTKLHSSL 76
          IL SMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of PI0002398 vs. NCBI nr
Match: XP_016902860.1 (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo] >KAA0059347.1 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEK+TKLQGYLDEVKKIVSESCSQ+VLEVALNSISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILYSMSSSTKLHSSL 76
          IL SMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of PI0002398 vs. NCBI nr
Match: KAG7025939.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 4.9e-18
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
          MEA++ DD QIIG   EDQDYLEK+TKLQGYLDEVKKIV ESCS++VLEVAL+S+SSLI+
Sbjct: 1  MEAEISDD-QIIGKAFEDQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 60

Query: 61 ILYSMSSS---TKLHSSL 76
          IL SM+SS   TKLHSSL
Sbjct: 61 ILSSMASSSSFTKLHSSL 77

[Close]
BLAST of PI0002398 vs. NCBI nr
Match: KAG6593594.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.0 bits (214), Expect = 7.3e-14
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0 

Query: 1   MEAKVLDDLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLIT 60
           +  ++L++       L +QDYLEK+TKLQGYLDEVKKIV ESCS++VLEVAL+S+SSLI+
Sbjct: 344 LSVEILENFWCCLCSLSNQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 403

Query: 61  ILYSM---SSSTKLHSSL 76
           IL SM   SSSTKLHSSL
Sbjct: 404 ILSSMASSSSSTKLHSSL 421

[Close]
BLAST of PI0002398 vs. NCBI nr
Match: XP_021294825.1 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X1 [Herrania umbratica])

HSP 1 Score: 64.7 bits (156), Expect = 3.9e-07
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 17  EDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSSSTKLHSSL 76
           +D+D++++L + Q Y D VK++V   CSQDVL+VALNS+SSL++IL  MSSS K HSSL
Sbjct: 61  QDEDHIKRLKEFQAYFDMVKRMVKPGCSQDVLKVALNSMSSLVSILTYMSSSPKPHSSL 119

[Close]
BLAST of PI0002398 vs. TAIR 10
Match: AT1G76550.1 (Phosphofructokinase family protein )

HSP 1 Score: 57.0 bits (136), Expect = 7.6e-09
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + +   +EDQDY+ K+ KLQ YLD+V+ IV   CSQDVL+ AL+ ++S+  +L ++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

[Close]
BLAST of PI0002398 vs. TAIR 10
Match: AT1G20950.1 (Phosphofructokinase family protein )

HSP 1 Score: 54.3 bits (129), Expect = 4.9e-08
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKLTKLQGYLDEVKKIVSESCSQDVLEVALNSISSLITILYSMSS 67
           D + +   +EDQDY+ ++ KLQ YLD+V+ IV   CSQDVL+ AL+ ++S+  +L ++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

The following BLAST results are available for this feature:
BLAST of PI0002398 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9K31.1e-0746.77Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arab... [more]
Q9SYP26.9e-0744.26Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arab... [more]
P213429.0e-0743.75Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanu... [more]
Q411401.2e-0645.16Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinu... [more]
BLAST of PI0002398 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAL44.0e-2693.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1[more]
A0A5A7UXI55.3e-2694.67Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS... [more]
A0A1S4E4F95.3e-2694.67pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS... [more]
A0A6J1B6741.9e-0757.63pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isof... [more]
A0A6J1B6J41.9e-0757.63pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isof... [more]
BLAST of PI0002398 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45427.18.3e-2693.33hypothetical protein Csa_016056 [Cucumis sativus][more]
XP_016902860.11.1e-2594.67PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph... [more]
KAG7025939.14.9e-1875.64Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbit... [more]
KAG6593594.17.3e-1465.38Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial ... [more]
XP_021294825.13.9e-0757.63pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isof... [more]
BLAST of PI0002398 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G76550.17.6e-0946.77Phosphofructokinase family protein [more]
AT1G20950.14.9e-0844.26Phosphofructokinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43650PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASEcoord: 10..73
NoneNo IPR availablePANTHERPTHR43650:SF14PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHAcoord: 10..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002398.1PI0002398.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006096 glycolytic process
biological_process GO:0015979 photosynthesis
biological_process GO:0009749 response to glucose
cellular_component GO:0005829 cytosol
molecular_function GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity
molecular_function GO:0043167 ion binding