Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACGGATCCATCGTCCCTTAAAACACTCTCTTGTAATGATGTTTTAACTCAAGCATTGGGTATGAAAAAGCATCATGGTCGTGTATGTGGGGTCGGCGGGTATGTTACTCCTATGACTTACTTTCATTTAGTGGAAAAAATATCGGAACGTGAGAACGAAATTCTACTTGAGAATGAAGAACTTCGAAAGCGCGTTAGCGAATTGAAAGCACGTATTCACAATAATTTGTCTATCCCGTTATCCAGACAAGGAAGTTGTTCGAGGGCAAATTTATTGGAGGAAATTGAGTCAAAAAATATTATCAAAGAGAAGAGTAAGTTGAAGGAGGATGTGAAACTAAAAGAGAAGATGAAGGAGAAGGAGAATGAACCTAAAGGAAAATTGAAAGAGACCGAGCTGGAGGTGATCAACGTAACCGACAATGAAGTAGATTTGGACCTCTTCAAGTTAAGTGATCCACCTATAAACTCAAATGTCTAA
mRNA sequence
ATGAATACGGATCCATCGTCCCTTAAAACACTCTCTTGTAATGATGTTTTAACTCAAGCATTGGGTATGAAAAAGCATCATGGTCGTGTATGTGGGGTCGGCGGGTATGTTACTCCTATGACTTACTTTCATTTAGTGGAAAAAATATCGGAACGTGAGAACGAAATTCTACTTGAGAATGAAGAACTTCGAAAGCGCGTTAGCGAATTGAAAGCACGTATTCACAATAATTTGTCTATCCCGTTATCCAGACAAGGAAGTTGTTCGAGGGCAAATTTATTGGAGGAAATTGAGTCAAAAAATATTATCAAAGAGAAGAGTAAGTTGAAGGAGGATGTGAAACTAAAAGAGAAGATGAAGGAGAAGGAGAATGAACCTAAAGGAAAATTGAAAGAGACCGAGCTGGAGGTGATCAACGTAACCGACAATGAAGTAGATTTGGACCTCTTCAAGTTAAGTGATCCACCTATAAACTCAAATGTCTAA
Coding sequence (CDS)
ATGAATACGGATCCATCGTCCCTTAAAACACTCTCTTGTAATGATGTTTTAACTCAAGCATTGGGTATGAAAAAGCATCATGGTCGTGTATGTGGGGTCGGCGGGTATGTTACTCCTATGACTTACTTTCATTTAGTGGAAAAAATATCGGAACGTGAGAACGAAATTCTACTTGAGAATGAAGAACTTCGAAAGCGCGTTAGCGAATTGAAAGCACGTATTCACAATAATTTGTCTATCCCGTTATCCAGACAAGGAAGTTGTTCGAGGGCAAATTTATTGGAGGAAATTGAGTCAAAAAATATTATCAAAGAGAAGAGTAAGTTGAAGGAGGATGTGAAACTAAAAGAGAAGATGAAGGAGAAGGAGAATGAACCTAAAGGAAAATTGAAAGAGACCGAGCTGGAGGTGATCAACGTAACCGACAATGAAGTAGATTTGGACCTCTTCAAGTTAAGTGATCCACCTATAAACTCAAATGTCTAA
Protein sequence
MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLENEELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMKEKENEPKGKLKETELEVINVTDNEVDLDLFKLSDPPINSNV
Homology
BLAST of PI0002308 vs. ExPASy TrEMBL
Match:
A0A5A7TNT9 (ABC transporter B family member 19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00210 PE=4 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27
Identity = 84/150 (56.00%), Postives = 103/150 (68.67%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD S + NDVLTQALG K+H+GRVCGVGGY TP+TYFH V+K S+ E ILLEN
Sbjct: 1 MNTDSSFVNRHYSNDVLTQALGAKEHNGRVCGVGGYFTPITYFHSVKKTSKEETNILLEN 60
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR++VSEL+A+IH+NLS PLS SCSR +LE IE EKSK V+++ K
Sbjct: 61 EELRRQVSELEAQIHSNLSTPLSAHRSCSRPIMLEGIE------EKSK---RVEVESMDK 120
Query: 121 EKENEPKGKLKETELEVINVTDNEVDLDLF 151
KENE KGK EV+ +NE + D+F
Sbjct: 121 PKENEKKGK------EVLQ--NNEPEFDVF 133
BLAST of PI0002308 vs. ExPASy TrEMBL
Match:
A0A5A7T7B1 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00330 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD SS+ NDVLTQALG KKH+GRV GVGGYVTP TYFH V+K S+ E IL+EN
Sbjct: 45 MNTDSSSVNRHYSNDVLTQALGTKKHNGRVRGVGGYVTPTTYFHSVKKTSKDEANILVEN 104
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR+RVSEL+A+I +NLS PLS GSCSR +LE IE K +++ + K K K
Sbjct: 105 EELRRRVSELEAQIRSNLSTPLSAHGSCSRPIVLEGIEEKG-----KRIEVESLDKPKQK 164
Query: 121 EKENEPKGKLKETELEVINVTD 143
EK+ + K+ E EL+V+ D
Sbjct: 165 EKKGKEVMKMNEPELDVLKERD 181
BLAST of PI0002308 vs. ExPASy TrEMBL
Match:
A0A5D3BQ76 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00070 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD SS+ NDVLTQALG KKH+GRV GVGGYVTP TYFH V+K S+ E IL+EN
Sbjct: 30 MNTDSSSVNRHYSNDVLTQALGTKKHNGRVRGVGGYVTPTTYFHSVKKTSKDEANILVEN 89
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR+RVSEL+A+I +NLS PLS GSCSR +LE IE K +++ + K K K
Sbjct: 90 EELRRRVSELEAQIRSNLSTPLSAHGSCSRPIVLEGIEEKG-----KRIEVESLDKPKQK 149
Query: 121 EKENEPKGKLKETELEVINVTD 143
EK+ + K+ E EL+V+ D
Sbjct: 150 EKKGKEVMKMNEPELDVLKERD 166
BLAST of PI0002308 vs. ExPASy TrEMBL
Match:
A0A5D3C8G6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001550 PE=3 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 78/142 (54.93%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD SS+ NDVLTQALG K+H+GRV GVGGYVTP TYFH V+K S+ E IL+EN
Sbjct: 206 MNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSVKKTSKDEANILVEN 265
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR+RVSEL+A+I +NLS PLS GSCSR +LE IE K +++ + K K K
Sbjct: 266 EELRRRVSELEAQIRSNLSTPLSAHGSCSRPIVLEGIEEKG-----KRIEVESLDKPKQK 325
Query: 121 EKENEPKGKLKETELEVINVTD 143
EK+ + K+ E EL+V+ D
Sbjct: 326 EKKGKEVMKMNEPELDVLKERD 342
BLAST of PI0002308 vs. ExPASy TrEMBL
Match:
A0A5A7V0G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00370 PE=3 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 78/142 (54.93%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD SS+ NDVLTQALG K+H+GRV GVGGYVTP TYFH V+K S+ E IL+EN
Sbjct: 244 MNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSVKKTSKDEANILVEN 303
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR+RVSEL+A+I +NLS PLS GSCSR +LE IE K +++ + K K K
Sbjct: 304 EELRRRVSELEAQIRSNLSTPLSAHGSCSRPIVLEGIEEKG-----KRIEVESLDKPKQK 363
Query: 121 EKENEPKGKLKETELEVINVTD 143
EK+ + K+ E EL+V+ D
Sbjct: 364 EKKGKEVMKMNEPELDVLKERD 380
BLAST of PI0002308 vs. NCBI nr
Match:
XP_031737547.1 (uncharacterized protein LOC116402437 [Cucumis sativus])
HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 90/158 (56.96%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNT SS K S NDVLTQALG K+HHGRV GVGGYVTP YFH V+K S+RE+EI+LEN
Sbjct: 30 MNTSSSSQKGHSSNDVLTQALGTKEHHGRVRGVGGYVTPTNYFHSVKKTSKREDEIILEN 89
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
+ELR+RVSEL+A IH+NLS PLS GSCS+ N+LEE +S IIK KSKL +
Sbjct: 90 KELRRRVSELEAHIHSNLSRPLSGHGSCSKPNILEESDSMKIIKGKSKLMD--------- 149
Query: 121 EKENEPKGKLKETELEVINVTDNEVDLDLFKLSDPPIN 159
K++ E+E INV D++V+LD+FK+ D N
Sbjct: 150 --------KIEGKEVEEINVNDDKVELDIFKVCDRSSN 170
BLAST of PI0002308 vs. NCBI nr
Match:
XP_031739205.1 (uncharacterized protein LOC116402905 [Cucumis sativus])
HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 90/158 (56.96%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNT SS K S NDVLTQALG K+HHGRV GVGGYVTP YFH V+K S+RE+EI+LEN
Sbjct: 30 MNTSSSSQKGHSSNDVLTQALGTKEHHGRVRGVGGYVTPTNYFHSVKKTSKREDEIILEN 89
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
+ELR+RVSEL+A IH+NLS PLS GSCS+ N+LEE +S IIK KSKL +
Sbjct: 90 KELRRRVSELEAHIHSNLSRPLSGHGSCSKPNILEESDSMKIIKGKSKLMD--------- 149
Query: 121 EKENEPKGKLKETELEVINVTDNEVDLDLFKLSDPPIN 159
K++ E+E INV D++V+LD+FK+ D N
Sbjct: 150 --------KIEGKEVEEINVNDDKVELDIFKVCDRSSN 170
BLAST of PI0002308 vs. NCBI nr
Match:
XP_031741716.1 (uncharacterized protein LOC116403912 [Cucumis sativus])
HSP 1 Score: 154.5 bits (389), Expect = 8.0e-34
Identity = 89/158 (56.33%), Postives = 110/158 (69.62%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNT SS K S NDVLTQALG K+HHGRV GV GYVTP YFH V+K S+RE+EI+LEN
Sbjct: 30 MNTSSSSQKGHSSNDVLTQALGTKEHHGRVRGVDGYVTPTNYFHSVKKTSKREDEIILEN 89
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
+ELR+RVSEL+A IH+NLS PLS GSCS+ N+LEE +S IIK KSKL +
Sbjct: 90 KELRRRVSELEAHIHSNLSRPLSGHGSCSKPNILEESDSMKIIKGKSKLMD--------- 149
Query: 121 EKENEPKGKLKETELEVINVTDNEVDLDLFKLSDPPIN 159
K++ E+E INV D++V+LD+FK+ D N
Sbjct: 150 --------KIEGKEVEEINVNDDKVELDIFKVCDRSSN 170
BLAST of PI0002308 vs. NCBI nr
Match:
XP_031741710.1 (uncharacterized protein LOC116403905 [Cucumis sativus])
HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 90/159 (56.60%), Postives = 112/159 (70.44%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENE-ILLE 60
MNT SS K S NDVLTQALG K+H+GRVCGVGGYVTP YFH V+K S+RE+E I+LE
Sbjct: 113 MNTSSSSQKGHSSNDVLTQALGTKEHNGRVCGVGGYVTPTNYFHSVKKTSKREDENIILE 172
Query: 61 NEELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKM 120
NEELR+RVSEL+A IH+NLS PLS GSCS+ N+LEE +S IIK KSKL + ++ K
Sbjct: 173 NEELRRRVSELEAHIHSNLSRPLSGHGSCSKPNILEESDSMKIIKGKSKLMDTIEGK--- 232
Query: 121 KEKENEPKGKLKETELEVINVTDNEVDLDLFKLSDPPIN 159
E+E INV D++V+LD+FK+ + N
Sbjct: 233 --------------EVEEINVNDDKVELDIFKVCNRSSN 254
BLAST of PI0002308 vs. NCBI nr
Match:
KAA0043085.1 (ABC transporter B family member 19-like [Cucumis melo var. makuwa] >TYK30796.1 ABC transporter B family member 19-like [Cucumis melo var. makuwa])
HSP 1 Score: 131.7 bits (330), Expect = 5.6e-27
Identity = 84/150 (56.00%), Postives = 103/150 (68.67%), Query Frame = 0
Query: 1 MNTDPSSLKTLSCNDVLTQALGMKKHHGRVCGVGGYVTPMTYFHLVEKISERENEILLEN 60
MNTD S + NDVLTQALG K+H+GRVCGVGGY TP+TYFH V+K S+ E ILLEN
Sbjct: 1 MNTDSSFVNRHYSNDVLTQALGAKEHNGRVCGVGGYFTPITYFHSVKKTSKEETNILLEN 60
Query: 61 EELRKRVSELKARIHNNLSIPLSRQGSCSRANLLEEIESKNIIKEKSKLKEDVKLKEKMK 120
EELR++VSEL+A+IH+NLS PLS SCSR +LE IE EKSK V+++ K
Sbjct: 61 EELRRQVSELEAQIHSNLSTPLSAHRSCSRPIMLEGIE------EKSK---RVEVESMDK 120
Query: 121 EKENEPKGKLKETELEVINVTDNEVDLDLF 151
KENE KGK EV+ +NE + D+F
Sbjct: 121 PKENEKKGK------EVLQ--NNEPEFDVF 133
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TNT9 | 2.7e-27 | 56.00 | ABC transporter B family member 19-like OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| A0A5A7T7B1 | 6.0e-27 | 55.63 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3BQ76 | 6.0e-27 | 55.63 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3C8G6 | 1.3e-26 | 54.93 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7V0G8 | 1.3e-26 | 54.93 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_031737547.1 | 1.2e-34 | 56.96 | uncharacterized protein LOC116402437 [Cucumis sativus] | [more] |
| XP_031739205.1 | 1.2e-34 | 56.96 | uncharacterized protein LOC116402905 [Cucumis sativus] | [more] |
| XP_031741716.1 | 8.0e-34 | 56.33 | uncharacterized protein LOC116403912 [Cucumis sativus] | [more] |
| XP_031741710.1 | 1.4e-33 | 56.60 | uncharacterized protein LOC116403905 [Cucumis sativus] | [more] |
| KAA0043085.1 | 5.6e-27 | 56.00 | ABC transporter B family member 19-like [Cucumis melo var. makuwa] >TYK30796.1 A... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
