PI0002151 (gene) Melon (PI 482460) v1

Overview
NamePI0002151
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 22655072 .. 22655399 (+)
RNA-Seq ExpressionPI0002151
SyntenyPI0002151
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCGCAGAGAGATAAAAGCTTCCAAGGAATCAAATTCAATATGCAGCAAAGGAATTGAGTTACCAAATTGTTCAAAAATAAAGCACACATGCCTTCTTCAATCGACTTTCACCTTAAGCACCTTGATTTTCCACACTCTTCTAAATCTCTTGAAACCCACACCAATCAAAAAACCAACGGAGAGTCACGAACAATTCATCCAACCCCTTCCAAACCAGAAGCATTACACCAAGACACATCAACATTCATCTTCCAACCATCCTTAGGTGGCTTCCAAGTGTTGACACTCAACTTCTTCTTAGGCGCCAAATCAAGGGAGCTTGA

mRNA sequence

ATGTCCCGCAGAGAGATAAAAGCTTCCAAGGAATCAAATTCAATATGCAGCAAAGGAATTGAGTTACCAAATTTCACGAACAATTCATCCAACCCCTTCCAAACCAGAAGCATTACACCAAGACACATCAACATTCATCTTCCAACCATCCTTAGGTGGCTTCCAAGTGTTGACACTCAACTTCTTCTTAGGCGCCAAATCAAGGGAGCTTGA

Coding sequence (CDS)

ATGTCCCGCAGAGAGATAAAAGCTTCCAAGGAATCAAATTCAATATGCAGCAAAGGAATTGAGTTACCAAATTTCACGAACAATTCATCCAACCCCTTCCAAACCAGAAGCATTACACCAAGACACATCAACATTCATCTTCCAACCATCCTTAGGTGGCTTCCAAGTGTTGACACTCAACTTCTTCTTAGGCGCCAAATCAAGGGAGCTTGA

Protein sequence

MSRREIKASKESNSICSKGIELPNFTNNSSNPFQTRSITPRHINIHLPTILRWLPSVDTQLLLRRQIKGA
Homology
[Close]
BLAST of PI0002151 vs. ExPASy TrEMBL
Match: A0A0A0LW98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560850 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-11
Identity = 49/98 (50.00%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 1  MSRREIKASKESNSICSKGIELPN----------------------------FTNNSSNP 60
          MSR E  AS+ES+S+CS+GIELPN                             TN+ +N 
Sbjct: 1  MSRGEAIASEESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60

Query: 61 FQTRSITPRHINIHLPTILRWLPSVDTQLLLRRQIKGA 71
           QTRSIT R I+IHLPTILR +PSV+T+ LLRRQIKGA
Sbjct: 61 SQTRSITSRRISIHLPTILRRIPSVETKPLLRRQIKGA 98

[Close]
BLAST of PI0002151 vs. ExPASy TrEMBL
Match: A0A0A0KDY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111920 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 26 TNNSSNPFQTRSITPRHINIHLPTILRWLPSVDTQLLLRRQIKGA 71
          TNN   PF TR+ITPR I IHLPTIL  L S++T+LLLR QIKGA
Sbjct: 33 TNNP--PFHTRNITPRCICIHLPTILWRLLSIETKLLLRHQIKGA 75

[Close]
BLAST of PI0002151 vs. NCBI nr
Match: KGN66003.1 (hypothetical protein Csa_006997 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 9.2e-11
Identity = 49/98 (50.00%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 1  MSRREIKASKESNSICSKGIELPN----------------------------FTNNSSNP 60
          MSR E  AS+ES+S+CS+GIELPN                             TN+ +N 
Sbjct: 1  MSRGEAIASEESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60

Query: 61 FQTRSITPRHINIHLPTILRWLPSVDTQLLLRRQIKGA 71
           QTRSIT R I+IHLPTILR +PSV+T+ LLRRQIKGA
Sbjct: 61 SQTRSITSRRISIHLPTILRRIPSVETKPLLRRQIKGA 98

[Close]
BLAST of PI0002151 vs. NCBI nr
Match: KGN46602.1 (hypothetical protein Csa_005079 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 26 TNNSSNPFQTRSITPRHINIHLPTILRWLPSVDTQLLLRRQIKGA 71
          TNN   PF TR+ITPR I IHLPTIL  L S++T+LLLR QIKGA
Sbjct: 33 TNNP--PFHTRNITPRCICIHLPTILWRLLSIETKLLLRHQIKGA 75

The following BLAST results are available for this feature:
BLAST of PI0002151 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002151 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW984.5e-1150.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560850 PE=4 SV=1[more]
A0A0A0KDY31.4e-0468.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111920 PE=4 SV=1[more]
BLAST of PI0002151 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66003.19.2e-1150.00hypothetical protein Csa_006997 [Cucumis sativus][more]
KGN46602.12.9e-0468.89hypothetical protein Csa_005079 [Cucumis sativus][more]
BLAST of PI0002151 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002151.1PI0002151.1mRNA