PI0002130 (gene) Melon (PI 482460) v1

Overview


Name	PI0002130
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr02: 4303951 .. 4304220 (+)
RNA-Seq Expression	PI0002130
Synteny	PI0002130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTTAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGTGGCCGCGGAGAACATAACGAATATCTGTACTATAAAGCACCTACAGGCGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGACAACCAAGAGTTCAGAGTCGATGA

mRNA sequence

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTTAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGTGGCCGCGGAGAACATAACGAATATCTGTACTATAAAGCACCTACAGGCGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGACAACCAAGAGTTCAGAGTCGATGA

Coding sequence (CDS)

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTTAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGTGGCCGCGGAGAACATAACGAATATCTGTACTATAAAGCACCTACAGGCGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGACAACCAAGAGTTCAGAGTCGATGA

Protein sequence

MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYKAPTGVPDPQEYQQEPENQEELGQPRVQSR

Homology

[Close]

BLAST of PI0002130 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-28
Identity = 68/89 (76.40%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           MMMMP FGAGYCDSEV TGY D G+ P SSYMDVGPS SYM  HGHGRG GEHNEYLY++
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQSR
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRVQSR 135

[Close]

BLAST of PI0002130 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M MMP FGAGYCDS++GTGY D GV PSSSYMDV PSTSYM  HGHGRG G+HNEYLY++
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQ R
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRVQDR 141

[Close]

BLAST of PI0002130 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
          M MMP FGAGYCDS++GTGY D GV PSSSYMDV PSTSYM  HGHGRG G+HNEYLY++
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60

Query: 61 APTGVPDPQEYQQEPENQEELGQPRVQSR 90
          AP  V D QEYQQEPENQE+  Q RVQ R
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRVQDR 87

[Close]

BLAST of PI0002130 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.3e-27
Identity = 68/89 (76.40%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M+MMP FG GYCD EV T Y D GV PSSSYMDVGPSTSYMHGH H    GEHNEYLY++
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRH--DYGEHNEYLYHE 176

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           APT V D QEYQQEPENQEEL Q RVQSR
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRVQSR 203

[Close]

BLAST of PI0002130 vs. ExPASy TrEMBL
Match: A0A5A7UIF6 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001780 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 65/89 (73.03%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M +MP FGAGYCDS+V TGY D GV PSS YMDVGPS SYM  HGHGRG GEHN+YLY++
Sbjct: 188 MTVMPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYM--HGHGRGYGEHNQYLYHE 247

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQSR
Sbjct: 248 APADVSDRQEYQQEPENQEDREQHRVQSR 274

[Close]

BLAST of PI0002130 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 4.7e-28
Identity = 68/89 (76.40%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           MMMMP FGAGYCDSEV TGY D G+ P SSYMDVGPS SYM  HGHGRG GEHNEYLY++
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQSR
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRVQSR 135

[Close]

BLAST of PI0002130 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 4.0e-27
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M MMP FGAGYCDS++GTGY D GV PSSSYMDV PSTSYM  HGHGRG G+HNEYLY++
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQ R
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRVQDR 141

[Close]

BLAST of PI0002130 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 4.0e-27
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
          M MMP FGAGYCDS++GTGY D GV PSSSYMDV PSTSYM  HGHGRG G+HNEYLY++
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60

Query: 61 APTGVPDPQEYQQEPENQEELGQPRVQSR 90
          AP  V D QEYQQEPENQE+  Q RVQ R
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRVQDR 87

[Close]

BLAST of PI0002130 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 9.0e-27
Identity = 68/89 (76.40%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M+MMP FG GYCD EV T Y D GV PSSSYMDVGPSTSYMHGH H    GEHNEYLY++
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRH--DYGEHNEYLYHE 176

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           APT V D QEYQQEPENQEEL Q RVQSR
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRVQSR 203

[Close]

BLAST of PI0002130 vs. NCBI nr
Match: KAA0054357.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK12395.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.4e-26
Identity = 65/89 (73.03%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDLGVSPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYK 60
           M +MP FGAGYCDS+V TGY D GV PSS YMDVGPS SYM  HGHGRG GEHN+YLY++
Sbjct: 188 MTVMPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYM--HGHGRGYGEHNQYLYHE 247

Query: 61  APTGVPDPQEYQQEPENQEELGQPRVQSR 90
           AP  V D QEYQQEPENQE+  Q RVQSR
Sbjct: 248 APADVSDRQEYQQEPENQEDREQHRVQSR 274

The following BLAST results are available for this feature:

BLAST of PI0002130 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXX3	2.3e-28	76.40	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3BMS3	1.9e-27	74.16	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U3Y0	1.9e-27	74.16	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7SLF8	4.3e-27	76.40	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7UIF6	1.6e-26	73.03	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0002130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049532.1	4.7e-28	76.40	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	4.0e-27	74.16	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0048355.1	4.0e-27	74.16	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0025972.1	9.0e-27	76.40	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0054357.1	3.4e-26	73.03	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of PI0002130 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002130.1	PI0002130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance