PI0002110 (gene) Melon (PI 482460) v1

Overview


Name	PI0002110
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 29490329 .. 29492242 (-)
RNA-Seq Expression	PI0002110
Synteny	PI0002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTACGTTAACTCTCTTTAATTTGATAAAAATGCTTGTGTTATATAATAATAGATCTTGATGCGACACATTAATTTATACCTTCTCTATTTTCTATTTAGATAAATAAAAATTAGAGCTAATGATTTGTGAGTGTCATTATTAATACTTTATAGTAAACTTGTTGGTATATCATTACAATCTAATTAACTCAACCGGTGGGTTAATCTAACTAACCTAATTATAGTTATAAAAAAGGAGTCCAAAGCCATGAAATCCAAAACACTTGATAAAATTCTCCTTCCTAATTCATCCATCATCATCATCATCATCATCATCATCTTTCCCAATACACAGAAAGCCATGGTTTTCTTTGAAGTTGACCCCATTGAACCTCTGGCAAATGCACTCTGTATTCTTTCTAAAATTTCAGAAAAATGCCATTTCAAATGGACACCATTATCTTTCTCCATTGTAGTCTCCCAAAATAAACCTTTTTGCGTCTCAACTATCAAAATGTTGCCTAAAATGTTCGTTCGTTTTTATTGTCGCAGATTTTATGAAGTCAAATTTAATATTGTTGATTTCTTTGTTATAATGACTTATCTTCATCGCGTGGGAGTTTCTTCACTCTCTTTCTGTATGCCTACAAATCAAAGTAGTATCACTCTTAAATATCGTATTCCTTGTAAGTAATTTTCATTAGTATTTGGTTTATTATTATTGTTCTTGATATATCTTTCTTCAATAATAATGGTAACTGATATATGATTTTCAGGTCAAGAAAATCCATTTTACAAGAAAGTGCTACCAATATCCATAGTTCAAGAACATGCGAATGTTGGCGATGTTGACTATGCTTCTTTCTTTGTATCAATGGATTTAGAGGAGTTTCTATGTGTTGTACTAGACATGAACAATGCTGGTCATGGTAAACATTCTTTTCTAATAACTTATATACCCTTTCCTTTAATTTCTTGAAATAAAGAGAGTTTTTTCTTCTTCTTTTTGTGTTTTGTATATAAATCTTTTTGCAAGTTTTCTAAGGAATATTTTTATGTTTTGTTAATTTGTATGCAGTTCCTGTTACTATTACGAGTTCAGAAATCAAATTTATCGATCAAATTGATAATTGGGAAACTAGTTTTACCACCGAGGTATTTTATTCTTTATGTTAAAATATCATTTTAATATGCGTTTCTTCAATTTTAGTCTATATACTTTCGATTATTCTACAATCTTAGTTGTTGTAATTTCAATAAATTTTATAGTTAGCTTCTTATAATTTTTATCTAAATTGATTAAATAATAATAATAATAATAATTTTCTTGCAAGAAAATAAAATAAGTGAATATATTTTCCAAATTAATAGTTTAAATGCCTTGTGAATATATTTTAAAAAATAGTTTAAATGCTATAGATAACAAAAAGTTTTTCAAAACTAAATATTTATGATTTATTGAAAGAACATTTCTACACTATAGGGACTAAAATGATGTTTTAACGAAATTTAAGAGGGGTGCTAATTAAAAATATAATATGTCCACTTAGTGAAAATGTTTGGATGGACCCAAATTAATCATATCTTTTTCAAAAGAAAAAAAAAAAGGTATTTTAACATTTATTTAATCTTCATATATAGATTGATGTTAAAAAAATTAGGGCACGAATAAATTCATTTGCATGGCATTCTTTTTTTTTTTTTTTTTTTGTAGGAAGGAGATTGCATAATTGGAGGTATTGAAGAAGGAGTTGTAATTGAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATCCCAATGGTATGCTTTTGATTGCTCCTTTGGGAGTGTATACTCATATTTCTTCATTTTTTCCCCAAGATATATCTAATGGAGGAAATTGA

mRNA sequence

ATGGGATTTTATGAAGTCAAATTTAATATTGTTGATTTCTTTGTTATAATGACTTATCTTCATCGCGTGGGAGTTTCTTCACTCTCTTTCTGTATGCCTACAAATCAAAGTAGTATCACTCTTAAATATCGTATTCCTTGTCAAGAAAATCCATTTTACAAGAAAGTGCTACCAATATCCATAGTTCAAGAACATGCGAATGTTGGCGATGTTGACTATGCTTCTTTCTTTGTATCAATGGATTTAGAGGAGTTTCTATGTGTTGTACTAGACATGAACAATGCTGGTCATGTTCCTGTTACTATTACGAGTTCAGAAATCAAATTTATCGATCAAATTGATAATTGGGAAACTAGTTTTACCACCGAGGAAGGAGATTGCATAATTGGAGGTATTGAAGAAGGAGTTGTAATTGAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATCCCAATGGTATGCTTTTGATTGCTCCTTTGGGAGTGTATACTCATATTTCTTCATTTTTTCCCCAAGATATATCTAATGGAGGAAATTGA

Coding sequence (CDS)

ATGGGATTTTATGAAGTCAAATTTAATATTGTTGATTTCTTTGTTATAATGACTTATCTTCATCGCGTGGGAGTTTCTTCACTCTCTTTCTGTATGCCTACAAATCAAAGTAGTATCACTCTTAAATATCGTATTCCTTGTCAAGAAAATCCATTTTACAAGAAAGTGCTACCAATATCCATAGTTCAAGAACATGCGAATGTTGGCGATGTTGACTATGCTTCTTTCTTTGTATCAATGGATTTAGAGGAGTTTCTATGTGTTGTACTAGACATGAACAATGCTGGTCATGTTCCTGTTACTATTACGAGTTCAGAAATCAAATTTATCGATCAAATTGATAATTGGGAAACTAGTTTTACCACCGAGGAAGGAGATTGCATAATTGGAGGTATTGAAGAAGGAGTTGTAATTGAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATCCCAATGGTATGCTTTTGATTGCTCCTTTGGGAGTGTATACTCATATTTCTTCATTTTTTCCCCAAGATATATCTAATGGAGGAAATTGA

Protein sequence

MGFYEVKFNIVDFFVIMTYLHRVGVSSLSFCMPTNQSSITLKYRIPCQENPFYKKVLPISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWETSFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVYTHISSFFPQDISNGGN

Homology

[Close]

BLAST of PI0002110 vs. ExPASy TrEMBL
Match: A0A1S3C6G9 (uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 112/142 (78.87%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 48  QENPFYKKVLPISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEI 107
           QE+PF KK LP+SIV E  +VGDVDY SFFVSM LEEF CVV DM NA +VPVTITSS I
Sbjct: 185 QEDPFNKKELPMSIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRI 244

Query: 108 KFIDQIDNWETSFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPN 167
           KF+  ID+WETSFTT+EG+CIIGGIEEG  I+CGISLYPM+FYKAFTSKRVWFFSSCD N
Sbjct: 245 KFVALIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTN 304

Query: 168 GMLLIAPLGVYTHISSFFPQDI 190
           G+LLIAP+GVYTHISSFFPQ+I
Sbjct: 305 GLLLIAPMGVYTHISSFFPQEI 326

[Close]

BLAST of PI0002110 vs. ExPASy TrEMBL
Match: A0A0A0LJU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.1e-57
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 59  ISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWET 118
           +SIV+E A VGDVDY SFFVSM LEEF CVV DM NA +V VTITSS+IKF+  +D+WET
Sbjct: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWET 60

Query: 119 SFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVY 178
           SFTT+EG CIIGGIEEG  I+CGISLYPMEFYKAFTSKRVWFFSSCD NG+LLIAP+GVY
Sbjct: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 179 THISSFFPQDISNGGN 195
           THISSFFPQDI NGGN
Sbjct: 121 THISSFFPQDIPNGGN 136

[Close]

BLAST of PI0002110 vs. ExPASy TrEMBL
Match: A0A0A0LMQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.0e-52
Identity = 102/136 (75.00%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 59  ISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWET 118
           +SIV+EHANVGDVDY SFFVSM L++F CVV DM ++ +VP+TI SS+I F+   D WET
Sbjct: 1   MSIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFVVDHD-WET 60

Query: 119 SFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVY 178
           SFT +EG+CIIGGIEEG  I CGIS YPMEFYK FTSKRVWFFSSCD NG+LLIAP+GVY
Sbjct: 61  SFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 179 THISSFFPQDISNGGN 195
           THISSFFPQDIS GGN
Sbjct: 121 THISSFFPQDISIGGN 135

[Close]

BLAST of PI0002110 vs. ExPASy TrEMBL
Match: A0A5D3BK31 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00530 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.6e-34
Identity = 75/98 (76.53%), Postives = 83/98 (84.69%), Query Frame = 0


Query: 33  PTNQSSITLKYRIPCQENPFYKKVLPISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDM 92
           PTNQS ITLKYRIPCQE+PF KK LP+SIV E  +VGDVDY SFFVSM LEEF CVV DM
Sbjct: 5   PTNQSCITLKYRIPCQEDPFNKKELPMSIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDM 64

Query: 93  NNAGHVPVTITSSEIKFIDQIDNWETSFTTEEGDCIIG 131
            NA +VPVTITSS IKF+  ID+WETSFTT+EG+CIIG
Sbjct: 65  ENAAYVPVTITSSRIKFVALIDHWETSFTTKEGECIIG 102

[Close]

BLAST of PI0002110 vs. ExPASy TrEMBL
Match: A0A6J1I7S4 (uncharacterized protein LOC111470385 OS=Cucurbita maxima OX=3661 GN=LOC111470385 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.0e-28
Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = 0


Query: 6   VKFNIVDFFVIMTYLHRVGVSSLSFCMPTNQSSITLKYRIPCQENPFYKKVLPISIVQEH 65
           V+F+I DF++ +        SSL+  +  NQ    +++  P   +P   K++P S  +  
Sbjct: 68  VQFSIDDFYMTIVEQRSNRFSSLTLSIAENQRHFAMEFSPPSLVHP-RTKLIPTSPPERD 127

Query: 66  ANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWETSFTTEEG 125
            N G +DYAS FVS DL  F  +V  + N  H  +TIT+S+IK    +++ E   TT+  
Sbjct: 128 INEGAIDYAS-FVSFDLFHFRRLVTGLENNEHAYLTITNSQIKL--WVEDLEVVLTTQRN 187

Query: 126 DCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVYTHISSFF 185
           +CIIGG   G   E  + L P EF+  FTS+R+W F S DP GM LIAP+G+Y HISS+F
Sbjct: 188 ECIIGGFAAGDEFESAMCLCPWEFFYNFTSERLWLFKSYDPKGMTLIAPMGLYVHISSYF 246

Query: 186 PQD 189
           P+D
Sbjct: 248 PED 246

[Close]

BLAST of PI0002110 vs. NCBI nr
Match: XP_031737287.1 (uncharacterized protein LOC116402216 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 162/195 (83.08%), Postives = 174/195 (89.23%), Query Frame = 0


Query: 3   FYEVKFNIVDFFVIMTYLHRVGVSSLSFC---MPTNQSSITLKYRIPCQENPFYKKVLPI 62
           FYEV FNIVDFFVIMTYLHR+GVSSLSFC   MPTNQSSITLKYRIPCQENPFY KVLP+
Sbjct: 65  FYEVTFNIVDFFVIMTYLHRMGVSSLSFCMPTMPTNQSSITLKYRIPCQENPFYTKVLPM 124

Query: 63  SIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWETS 122
           SIV+E A VGDVDY SFFVSM LEEF CVV DM NA +V VTITSS+IKF+  +D+WETS
Sbjct: 125 SIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETS 184

Query: 123 FTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVYT 182
           FTT+EG CIIGGIEEG  I+CGISLYPMEFYKAFTSKRVWFFSSCD NG+LLIAP+GVYT
Sbjct: 185 FTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYT 244

Query: 183 HISSFFPQDISNGGN 195
           HISSFFPQDI NGGN
Sbjct: 245 HISSFFPQDIPNGGN 259

[Close]

BLAST of PI0002110 vs. NCBI nr
Match: KAE8651933.1 (hypothetical protein Csa_006731 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 149/181 (82.32%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 17  MTYLHRVGVSSLSFC---MPTNQSSITLKYRIPCQENPFYKKVLPISIVQEHANVGDVDY 76
           MTYLHR+GVSSLSFC   MPTNQSSITLKYRIPCQENPFY KVLP+SIV+E A VGDVDY
Sbjct: 1   MTYLHRMGVSSLSFCMPTMPTNQSSITLKYRIPCQENPFYTKVLPMSIVEEPAEVGDVDY 60

Query: 77  ASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWETSFTTEEGDCIIGGIE 136
            SFFVSM LEEF CVV DM NA +V VTITSS+IKF+  +D+WETSFTT+EG CIIGGIE
Sbjct: 61  GSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGIE 120

Query: 137 EGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVYTHISSFFPQDISNGG 195
           EG  I+CGISLYPMEFYKAFTSKRVWFFSSCD NG+LLIAP+GVYTHISSFFPQDI NGG
Sbjct: 121 EGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYTHISSFFPQDIPNGG 180

[Close]

BLAST of PI0002110 vs. NCBI nr
Match: XP_008457793.2 (PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-58
Identity = 112/142 (78.87%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 48  QENPFYKKVLPISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEI 107
           QE+PF KK LP+SIV E  +VGDVDY SFFVSM LEEF CVV DM NA +VPVTITSS I
Sbjct: 185 QEDPFNKKELPMSIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRI 244

Query: 108 KFIDQIDNWETSFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPN 167
           KF+  ID+WETSFTT+EG+CIIGGIEEG  I+CGISLYPM+FYKAFTSKRVWFFSSCD N
Sbjct: 245 KFVALIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTN 304

Query: 168 GMLLIAPLGVYTHISSFFPQDI 190
           G+LLIAP+GVYTHISSFFPQ+I
Sbjct: 305 GLLLIAPMGVYTHISSFFPQEI 326

[Close]

BLAST of PI0002110 vs. NCBI nr
Match: XP_031737417.1 (uncharacterized protein LOC116402255 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-52
Identity = 102/136 (75.00%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 59  ISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDMNNAGHVPVTITSSEIKFIDQIDNWET 118
           +SIV+EHANVGDVDY SFFVSM L++F CVV DM ++ +VP+TI SS+I F+   D WET
Sbjct: 1   MSIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFVVDHD-WET 60

Query: 119 SFTTEEGDCIIGGIEEGVVIECGISLYPMEFYKAFTSKRVWFFSSCDPNGMLLIAPLGVY 178
           SFT +EG+CIIGGIEEG  I CGIS YPMEFYK FTSKRVWFFSSCD NG+LLIAP+GVY
Sbjct: 61  SFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 179 THISSFFPQDISNGGN 195
           THISSFFPQDIS GGN
Sbjct: 121 THISSFFPQDISIGGN 135

[Close]

BLAST of PI0002110 vs. NCBI nr
Match: KAA0045794.1 (uncharacterized protein E6C27_scaffold243G003160 [Cucumis melo var. makuwa] >TYJ99487.1 uncharacterized protein E5676_scaffold123G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-34
Identity = 75/98 (76.53%), Postives = 83/98 (84.69%), Query Frame = 0


Query: 33  PTNQSSITLKYRIPCQENPFYKKVLPISIVQEHANVGDVDYASFFVSMDLEEFLCVVLDM 92
           PTNQS ITLKYRIPCQE+PF KK LP+SIV E  +VGDVDY SFFVSM LEEF CVV DM
Sbjct: 5   PTNQSCITLKYRIPCQEDPFNKKELPMSIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDM 64

Query: 93  NNAGHVPVTITSSEIKFIDQIDNWETSFTTEEGDCIIG 131
            NA +VPVTITSS IKF+  ID+WETSFTT+EG+CIIG
Sbjct: 65  ENAAYVPVTITSSRIKFVALIDHWETSFTTKEGECIIG 102

The following BLAST results are available for this feature:

BLAST of PI0002110 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6G9	1.2e-58	78.87	uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=...	[more]
A0A0A0LJU4	5.1e-57	80.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1	[more]
A0A0A0LMQ7	1.0e-52	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1	[more]
A0A5D3BK31	3.6e-34	76.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1I7S4	5.0e-28	40.44	uncharacterized protein LOC111470385 OS=Cucurbita maxima OX=3661 GN=LOC111470385...	[more]

BLAST of PI0002110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737287.1	2.0e-87	83.08	uncharacterized protein LOC116402216 [Cucumis sativus]	[more]
KAE8651933.1	2.3e-80	82.32	hypothetical protein Csa_006731 [Cucumis sativus]	[more]
XP_008457793.2	2.5e-58	78.87	PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo]	[more]
XP_031737417.1	2.1e-52	75.00	uncharacterized protein LOC116402255 [Cucumis sativus]	[more]
KAA0045794.1	7.4e-34	76.53	uncharacterized protein E6C27_scaffold243G003160 [Cucumis melo var. makuwa] >TYJ...	[more]

BLAST of PI0002110 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 4..174 e-value: 2.1E-5 score: 25.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002110.1	PI0002110.1	mRNA