PI0002007 (gene) Melon (PI 482460) v1

Overview
NamePI0002007
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionserine/arginine-rich splicing factor 11 isoform X1
Locationchr02: 666773 .. 669878 (+)
RNA-Seq ExpressionPI0002007
SyntenyPI0002007
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAATGGTAATCTTTACATAAGCTTACACCGAGGGTTTCCTAAAACACAAGAGAAGCGCGACTTTCCCTTACCCGCCGGCACCGGTATCTTCCTCTTCTTCTTCTTCCTCTTCCTCAAACTGAATCAGTATCTACTGATGCATAAACCCTTTAAGCTTTTCCCTTTTTATTTTTGGTGTAATTTCGTTGTCACCTGCTCGATTTAGGGTTTCGTTTTGGTTTTTTGCGGTTTCTTATTGGATTTTTCTATGCTATATTCTATGTTTCAAATTCATTTTGATTTGCTCCTCTCTTGGAGGTTGTGGATCCAACAATTTGAGTCATAGGGAAGGATACTTGGCAACGATATAAATTGCAAGTCAAGTTTATAACTAATATTGCCACTGATTTGATTTGTCTTGTTTGTACTGAATTTGTGTTGAGTTAGATGGATTCCTTTGATTTCTGAGTAATTTTTGTTTTTTTGTTAGATGATTTATATAGCCTCACTGTAAATTGTGATATATTTGCTGATCAATGGCTGCCACATCTTCGGCTGCAACATCCTATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCTTAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGCAGGCATCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCTGACTCCGAATCCGATTACTCCCGGTAACCTCAGTAACTTGAATACTTCTTCTCTTATTATGATATTTTCATACCTTTGTTGTTCATTAGAGTTTGAAACAGATAGGGAGATTTAGTTATTCTGAGTTTCTATAGAAAAAAAAAAAAGATTTAGTTATTCTGAGTTTTTATGCGATTGTTTAATACTTTTTGTGGAACTCTTTTGAGAGCCTTATTTGATTCGTTTTTTTTGGTTTTTTCCTCCCTTACTGGAAGTCTTGTGATTTTTGTATTCTTATGATTAGGTTTGTTAGTGAGAGTTTCCTGGAATGAGAACTTCAACACCTGTTTCAGAATTCGAAATCTATGGATTTTTTTTTTTTTTTTTTTGCAAAGCTAAGAATTTGAGGCTCATCATGTATTTCCTACTCACGTAAAAAAGAGGCAAAAATGTGTTTGCCTCTTTTAGTCAATAAAAAATGGAAAATGACAATTAAGAATAGTTCTAAACCATTAGAAATAAGAACCAAAACCATTAGAATGGAAACTTTACCCTGTAAACAACCATAAATTTCAAAAACAGAAAACTAAAAATGAAATAGTCATCAAACAATTTATACTTTTCAAGAGCATGTCTCAGTGAGCGATGTTACTGGGTTTTCTAGTCAATTATTTTTGCAAAGCACATTTTATGTACCCAAGATAGTTCTTACCAGTTCTTGTATGTATACATGTAGAAGCAATAGCTCTTCTCAAAGTGAGCCTGAAACATCAAGCCGTTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGTAGATGTTTTTATATAACATTTTTTCTATGTGGCTTTGTAGTTTCACTTGTGAATTTTCACCTTGCTATTGTTATTCTCTCTCTTTGCATCTTAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGGTAGACCACTTTCCTGTTTGTGGACTATTCCTCTCCTCTCCCGTCACCCCTCTTTTTTTCATAAATGTGTACTTTTTTTTTTTTGTTGCTGTTAATGCTATACTTTCGATGACCTTGGAAATGCCATTGAACTAACCTCTTTTTATCGTGGTTTTTACCTGTATCTACATCCTTTTGGCATATTACTTCAGAACATGTTGTGATAATGTCAATCTAGCTTACGCATGTATAAATTCACATAATGTTCTTCTTCTAATCATTGCATAAGGCATAAAGAATCCAAGCATCATTGAGGCACAATCCTCATGTGTAATAGTCCTTTAACCACTTACAATCCAAAGAAGATATAAGCTTTCAGGCTAAAGTTTTGAGTCAGTCAGGCAAACCATGCAAGCTGAAAGTATTGATCTATTTGCCAAATGATCTTTTTGTTTTTTGTCATGCAATATTTAGACTGCATCTATAGTTTGTTTTGTTTTTGGAAGGGTTTCTAAATTGGATATGATTTGAGATGTACTATGACTATTTACTGATTGGTTCTTTGAAATTGGAGTTGGGGTCTGTGGCATGATGATCGGGCTGTTGATTGACTTGCCTTGAATGGTTTGTTATGCGGATTTGTCCTGGCATTCGGAGTCGATGTATAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCTAAGGTTCCCTTCACAGCATTGTTTATTTTCCAATATCTTTCTTTCTCGACGTCTCTTATCTAAACTTTGCAGTTGCTTCATCTATTTAACAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCTGTCTCTGGCAAAAAGGTGATAGATCCATCTCTTAGTTGTTTTTGCCCATGTTTTCCAGTGCTTTTGGCATGGCTTAGAACAGTTTTGCCTTGACCAAAAGCCCTTGTCACTCATACTCTCGCCAGGTCTAGGGTATTTAAGAATTACTCTGAAAAAGGTTTAGCAAAGTTTAATAGTTCTTGGTGAGAAGAGAACTACTTGTAAAGTACTTTTTATTTAGTTATTATTATTTTGCAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAAATGACTGTTGGAAATGAAGGAAAGAGGCATTGTTAGCTGCTGCATGAAAAAAATAGAGTTCTACCAACAGTTGTGTGGTGATTATGCTGTAGGACATTTAAGCCTTTGAACTTTCTTCCCTTGATGTTTTGATGCCCATATGGATCAAGATCTTGTTTTAATTCCTTATGGACAGGAATTGAAATTGAAATGAAAAATTATTTACTGTCTTATTTTATTTTTTTGATGAAATGGAATGGGAAGAATGATTGATTATTAGTTATGATCAGAATTTATGGTACATTGATTATTTA

mRNA sequence

AAACAATGGTAATCTTTACATAAGCTTACACCGAGGGTTTCCTAAAACACAAGAGAAGCGCGACTTTCCCTTACCCGCCGGCACCGATGATTTATATAGCCTCACTGTAAATTGTGATATATTTGCTGATCAATGGCTGCCACATCTTCGGCTGCAACATCCTATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCTTAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGCAGGCATCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCTGACTCCGAATCCGATTACTCCCGAAGCAATAGCTCTTCTCAAAGTGAGCCTGAAACATCAAGCCGTTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAAATGACTGTTGGAAATGAAGGAAAGAGGCATTGTTAGCTGCTGCATGAAAAAAATAGAGTTCTACCAACAGTTGTGTGGTGATTATGCTGTAGGACATTTAAGCCTTTGAACTTTCTTCCCTTGATGTTTTGATGCCCATATGGATCAAGATCTTGTTTTAATTCCTTATGGACAGGAATTGAAATTGAAATGAAAAATTATTTACTGTCTTATTTTATTTTTTTGATGAAATGGAATGGGAAGAATGATTGATTATTAGTTATGATCAGAATTTATGGTACATTGATTATTTA

Coding sequence (CDS)

ATGGCTGCCACATCTTCGGCTGCAACATCCTATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCTTAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGCAGGCATCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCTGACTCCGAATCCGATTACTCCCGAAGCAATAGCTCTTCTCAAAGTGAGCCTGAAACATCAAGCCGTTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

Protein sequence

MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Homology
[Close]
BLAST of PI0002007 vs. ExPASy TrEMBL
Match: A0A1S3BQ85 (peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SSA TS SSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDY+RSNSSS+SEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

Query: 181 FD 183
           FD
Sbjct: 181 FD 182

[Close]
BLAST of PI0002007 vs. ExPASy TrEMBL
Match: A0A0A0LVZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569230 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 173/182 (95.05%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR   SS+SEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 179

Query: 181 FD 183
           FD
Sbjct: 181 FD 179

[Close]
BLAST of PI0002007 vs. ExPASy TrEMBL
Match: A0A6J1C3K8 (serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111007940 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-66
Identity = 169/183 (92.35%), Postives = 177/183 (96.72%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SS+ATS++SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

Query: 181 SFD 183
           SFD
Sbjct: 181 SFD 183

[Close]
BLAST of PI0002007 vs. ExPASy TrEMBL
Match: A0A6J1HZG5 (probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.6e-60
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SS+A+ Y+SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS+SSSQSEPE S RSKRHKKND TK  KERERS+S HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSQHHKRRKHKAKEK 120

Query: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

Query: 181 SFD 183
           SFD
Sbjct: 181 SFD 180

[Close]
BLAST of PI0002007 vs. ExPASy TrEMBL
Match: A0A6J1I4D4 (NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.1e-60
Identity = 164/183 (89.62%), Postives = 171/183 (93.44%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SS+A+ Y+SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS+SSSQSEPE S RSKRHKKND TKK   RERS+S HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK---RERSKSQHHKRRKHKAKEK 120

Query: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 179

Query: 181 SFD 183
           SFD
Sbjct: 181 SFD 179

[Close]
BLAST of PI0002007 vs. NCBI nr
Match: XP_008450603.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SSA TS SSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDY+RSNSSS+SEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

Query: 181 FD 183
           FD
Sbjct: 181 FD 182

[Close]
BLAST of PI0002007 vs. NCBI nr
Match: XP_038879353.1 (NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Benincasa hispida] >XP_038879355.1 NKAP family protein [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 4.6e-70
Identity = 172/182 (94.51%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SS+ATSY+SDSSSSSSRRRRRRR RREKDRDTLR+RKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAASSSSATSYTSDSSSSSSRRRRRRRARREKDRDTLRVRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSR+NSSSQSEPETS RSKRHK+NDR K+DKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRTNSSSQSEPETSGRSKRHKRNDRAKRDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

Query: 181 FD 183
           FD
Sbjct: 181 FD 182

[Close]
BLAST of PI0002007 vs. NCBI nr
Match: XP_031738322.1 (NKAP family protein isoform X1 [Cucumis sativus] >KAE8653363.1 hypothetical protein Csa_007551 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 3.0e-69
Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR NSSS+SEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 180

Query: 181 FD 183
           FD
Sbjct: 181 FD 181

[Close]
BLAST of PI0002007 vs. NCBI nr
Match: XP_011659818.1 (NKAP family protein isoform X2 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-68
Identity = 173/182 (95.05%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR   SS+SEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 179

Query: 181 FD 183
           FD
Sbjct: 181 FD 179

[Close]
BLAST of PI0002007 vs. NCBI nr
Match: XP_022136184.1 (serine/arginine-rich splicing factor 11 [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 4.0e-66
Identity = 169/183 (92.35%), Postives = 177/183 (96.72%), Query Frame = 0 

Query: 1   MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60
           MAA+SS+ATS++SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

Query: 181 SFD 183
           SFD
Sbjct: 181 SFD 183

[Close]
BLAST of PI0002007 vs. TAIR 10
Match: AT5G27860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 110/183 (60.11%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 2   AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 61
           A++SS+++  SSDSS S  RR+ RR  RR ++DRD+L++RKKSRS SK+ RR R+ SSDS
Sbjct: 3   ASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKK-RRRRQHSSDS 62

Query: 62  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 121
                  SD S S+SSS+S      +S+RHKK+++ KK K++ERS+SH HKR K++ ++K
Sbjct: 63  -------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKK 122

Query: 122 -QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 181
            + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+
Sbjct: 123 GEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNA 177

Query: 182 SFD 183
           SFD
Sbjct: 183 SFD 177

[Close]
BLAST of PI0002007 vs. TAIR 10
Match: AT5G27860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 23049 Blast hits to 11981 proteins in 648 species: Archae - 2; Bacteria - 589; Metazoa - 13464; Fungi - 1977; Plants - 1635; Viruses - 89; Other Eukaryotes - 5293 (source: NCBI BLink). )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 110/183 (60.11%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 2   AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 61
           A++SS+++  SSDSS S  RR+ RR  RR ++DRD+L++RKKSRS SK+ RR R+ SSDS
Sbjct: 3   ASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKK-RRRRQHSSDS 62

Query: 62  LSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 121
                  SD S S+SSS+S      +S+RHKK+++ KK K++ERS+SH HKR K++ ++K
Sbjct: 63  -------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKK 122

Query: 122 -QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 181
            + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+
Sbjct: 123 GEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNA 177

Query: 182 SFD 183
           SFD
Sbjct: 183 SFD 177

The following BLAST results are available for this feature:
BLAST of PI0002007 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002007 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BQ851.2e-7197.25peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE... [more]
A0A0A0LVZ31.6e-6895.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569230 PE=4 SV=1[more]
A0A6J1C3K82.0e-6692.35serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1HZG51.6e-6090.16probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1I4D46.1e-6089.62NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 ... [more]
BLAST of PI0002007 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450603.12.4e-7197.25PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo][more]
XP_038879353.14.6e-7094.51NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Ben... [more]
XP_031738322.13.0e-6996.15NKAP family protein isoform X1 [Cucumis sativus] >KAE8653363.1 hypothetical prot... [more]
XP_011659818.13.3e-6895.05NKAP family protein isoform X2 [Cucumis sativus][more]
XP_022136184.14.0e-6692.35serine/arginine-rich splicing factor 11 [Momordica charantia][more]
BLAST of PI0002007 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27860.11.1e-3260.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G27860.21.1e-3260.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..117
NoneNo IPR availablePANTHERPTHR35760SI:CH211-22I13.2coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002007.1PI0002007.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016853 isomerase activity