PI0001974 (gene) Melon (PI 482460) v1

Overview


Name	PI0001974
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription factor, TCP
Location	chr08: 16874908 .. 16875678 (-)
RNA-Seq Expression	PI0001974
Synteny	PI0001974

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCCACCGCTCCTCACTCCGTCGTCGGCAGTAACTCGTCTCCGGCCACCATCACGCACCAATCCCTCCTCCCTCGCAAGTCCACCACCTCCTTATCCTCCTCTTCTTCCAAGGATCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACCATCGAATGGCTTCTTCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCGGCTGCTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGCTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCGAGTTGCCGTCTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACGGCGTTGTTGTTGCAGCCGTCGACGGCGGAGGAGACGGAGGAGAGACAGGAGGAGGAGGTTTTCAGAGAATAATGGAAAATTGAAAGGATTAAACAGACACAGATAGGAGTCTAAAATTGCAGTATGGAGATTTTTTTACCCTTTTTTCAGCTCTTCTTCGTTCTCCTTCCTCTCGTCCTGTTCATGGCTGGAATTTGTAAAGGGAAGAAGAAACTGTAA

mRNA sequence

ATGGGATCGGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCCACCGCTCCTCACTCCGTCGTCGGCAGTAACTCGTCTCCGGCCACCATCACGCACCAATCCCTCCTCCCTCGCAAGTCCACCACCTCCTTATCCTCCTCTTCTTCCAAGGATCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACCATCGAATGGCTTCTTCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCGGCTGCTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGCTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCGAGTTGCCGTCTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACGGCGTTGTTGTTGCAGCCGTCGACGGCGGAGGAGACGGAGGAGAGACAGGAGGAGGAGCTCTTCTTCGTTCTCCTTCCTCTCGTCCTGTTCATGGCTGGAATTTGTAAAGGGAAGAAGAAACTGTAA

Coding sequence (CDS)

ATGGGATCGGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCCACCGCTCCTCACTCCGTCGTCGGCAGTAACTCGTCTCCGGCCACCATCACGCACCAATCCCTCCTCCCTCGCAAGTCCACCACCTCCTTATCCTCCTCTTCTTCCAAGGATCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACCATCGAATGGCTTCTTCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCGGCTGCTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGCTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCGAGTTGCCGTCTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACGGCGTTGTTGTTGCAGCCGTCGACGGCGGAGGAGACGGAGGAGAGACAGGAGGAGGAGCTCTTCTTCGTTCTCCTTCCTCTCGTCCTGTTCATGGCTGGAATTTGTAAAGGGAAGAAGAAACTGTAA

Protein sequence

MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTAEETEERQEEELFFVLLPLVLFMAGICKGKKKL

Homology

[Close]

BLAST of PI0001974 vs. ExPASy Swiss-Prot
Match: Q9SJK7 (Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.6e-36
Identity = 90/153 (58.82%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 53  SSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 112
           S+ +KDRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 113 TGTVPAAPISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYS 172
            GT     IS      A  + S S    P T   + Q       PSCRLDLCQP+G++Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 173 AAGNDYRHMPFTALLLQP--STAEETEERQEEE 204
              N Y HMPFTA+LL+P  +TAE   E  EEE
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of PI0001974 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.2e-27
Identity = 63/79 (79.75%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 54  SSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGT 113
           SS+KDRHTKV GRGRR+RMPALCAARIFQLTRELGH+SDGETI+WLL+QAEPSIIAATG+
Sbjct: 76  SSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGS 135

Query: 114 GTVPAAPISTVSSAMASSA 133
           GT+PA       SA+ASSA
Sbjct: 136 GTIPA-------SALASSA 147

[Close]

BLAST of PI0001974 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.2e-27
Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 16  PHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRHTKVNGRGRRVRMPAL 75
           P S PP    S + + SS AT T             +  S+KDRHTKV+GRGRR+RMPAL
Sbjct: 34  PRSTPP--EDSTLATTSSTATAT------------TTKRSTKDRHTKVDGRGRRIRMPAL 93

Query: 76  CAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSAMASSARSV 135
           CAAR+FQLTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++
Sbjct: 94  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTL 139

Query: 136 S 137
           S
Sbjct: 154 S 139

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BLAST of PI0001974 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 11  PSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRHTKVNGRGRRV 70
           P S    SQP T    ++ +    A +  +          L  +S+KDRHTKV+GRGRR+
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQEESAVVAAKK-------PPLKRASTKDRHTKVDGRGRRI 138

Query: 71  RMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSAMAS 130
           RMPALCAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ S
Sbjct: 139 RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRS 196

Query: 131 SARSVS 137
           S  S+S
Sbjct: 199 SGSSMS 196

[Close]

BLAST of PI0001974 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-26
Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 56  SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGT 115
           +KDRHTKV GRGRR+RMPALCAAR+FQLTRELGH++DGETIEWLL+QAEP+I+AATGTGT
Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGT 211

Query: 116 VPAAPISTVSSAMASSARSVSCRVQP 142
           +PA   S   S  ++++ S S R  P
Sbjct: 212 IPANFSSLAVSLRSAASHSSSPRAAP 237

[Close]

BLAST of PI0001974 vs. ExPASy TrEMBL
Match: A0A0A0KH86 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113
Identity = 214/225 (95.11%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLHKFPSSSDPHSQPPTA HSVVGSNSSP TIT QSLLPRKS T LSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEETEERQEEELFFVLLPLVLFMAGICKGKKKL 226
           MPFTALLLQPSTAEETEERQEEELFFVLLPLVLFM GICKGKKKL
Sbjct: 181 MPFTALLLQPSTAEETEERQEEELFFVLLPLVLFMTGICKGKKKL 225

[Close]

BLAST of PI0001974 vs. ExPASy TrEMBL
Match: A0A1S3CGZ3 (uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLHKFPSSSDPHSQPPTA HSVVGSNSSPATI+ QSLLPRKS TSLSSSSSKDRH
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 175

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 176 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 235

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCR+QPVTVGGSGQGMF+MPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 236 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRH 295

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPST EETEERQEEE+F
Sbjct: 296 MPFTALLLQPSTGEETEERQEEEVF 320

[Close]

BLAST of PI0001974 vs. ExPASy TrEMBL
Match: A0A5D3C791 (Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00190 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.6e-100
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLH FPSSSDPHSQPPTA HSVVGSNSSPATI+ QSLLPRKS TSLSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCR+QPVTVGGSGQGMF++PPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPST EETEERQEEE+F
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVF 205

[Close]

BLAST of PI0001974 vs. ExPASy TrEMBL
Match: A0A6J1EK07 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.5e-89
Identity = 175/206 (84.95%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSL-SSSSSKDR 60
           MGS+I LHKFPSSSD HSQP  A HSVV SN+SP  +T QS++PRKST SL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 180
           PIST+S AMASSA SVSCRVQ V V    QGMFAMPPPSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEETEERQEEELF 206
           HMPFTALLLQPSTA+E EERQEEE+F
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVF 206

[Close]

BLAST of PI0001974 vs. ExPASy TrEMBL
Match: A0A6J1IR93 (transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.7e-84
Identity = 170/206 (82.52%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSL-SSSSSKDR 60
           MGS+I LHKFPSSSD HSQ   A HSVV +NSSP  +T QS++PRKST SL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQSTAASHSVVRNNSSPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 180
           PIST++ AMASSA SVSCRVQ V V    QGMFAM  PSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTITPAMASSAPSVSCRVQSVGVAADEQGMFAM--PSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEETEERQEEELF 206
           HMPFTALLLQPSTA+E EERQE E+F
Sbjct: 181 HMPFTALLLQPSTADEAEERQEGEVF 204

[Close]

BLAST of PI0001974 vs. NCBI nr
Match: XP_004143267.1 (transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein Csa_003031 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101
Identity = 194/205 (94.63%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLHKFPSSSDPHSQPPTA HSVVGSNSSP TIT QSLLPRKS T LSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPSTAEETEERQEEE+F
Sbjct: 181 MPFTALLLQPSTAEETEERQEEEVF 205

[Close]

BLAST of PI0001974 vs. NCBI nr
Match: XP_008462463.1 (PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 6.2e-101
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLHKFPSSSDPHSQPPTA HSVVGSNSSPATI+ QSLLPRKS TSLSSSSSKDRH
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 175

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 176 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 235

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCR+QPVTVGGSGQGMF+MPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 236 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRH 295

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPST EETEERQEEE+F
Sbjct: 296 MPFTALLLQPSTGEETEERQEEEVF 320

[Close]

BLAST of PI0001974 vs. NCBI nr
Match: TYK07305.1 (transcription factor TCP11-like [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 5.3e-100
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGSDIVLH FPSSSDPHSQPPTA HSVVGSNSSPATI+ QSLLPRKS TSLSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           ISTVSSAMASS RSVSCR+QPVTVGGSGQGMF++PPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPST EETEERQEEE+F
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVF 205

[Close]

BLAST of PI0001974 vs. NCBI nr
Match: XP_038882900.1 (transcription factor TCP11 [Benincasa hispida])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 180/205 (87.80%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRH 60
           MGS+IVLHKFPS+SD H+  PTA HSVVGSNSS A IT Q+++PRKSTTSL   SS+DRH
Sbjct: 1   MGSEIVLHKFPSTSD-HNSQPTASHSVVGSNSSLANITPQAVVPRKSTTSL---SSRDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
           TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP
Sbjct: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120

Query: 121 ISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180
           IST+S AMASSARS+SCRVQP+TVGG GQGMFAMPPPSCRLDLCQPVGMEYSA GNDYRH
Sbjct: 121 ISTLSPAMASSARSISCRVQPLTVGGGGQGMFAMPPPSCRLDLCQPVGMEYSAVGNDYRH 180

Query: 181 MPFTALLLQPSTAEETEERQEEELF 206
           MPFTALLLQPSTAEE EERQEEE+F
Sbjct: 181 MPFTALLLQPSTAEEAEERQEEEVF 201

[Close]

BLAST of PI0001974 vs. NCBI nr
Match: XP_022926085.1 (transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.4 bits (864), Expect = 9.3e-89
Identity = 175/206 (84.95%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MGSDIVLHKFPSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSL-SSSSSKDR 60
           MGS+I LHKFPSSSD HSQP  A HSVV SN+SP  +T QS++PRKST SL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 180
           PIST+S AMASSA SVSCRVQ V V    QGMFAMPPPSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEETEERQEEELF 206
           HMPFTALLLQPSTA+E EERQEEE+F
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVF 206

[Close]

BLAST of PI0001974 vs. TAIR 10
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 90/153 (58.82%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 53  SSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 112
           S+ +KDRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 113 TGTVPAAPISTVSSAMASSARSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYS 172
            GT     IS      A  + S S    P T   + Q       PSCRLDLCQP+G++Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 173 AAGNDYRHMPFTALLLQP--STAEETEERQEEE 204
              N Y HMPFTA+LL+P  +TAE   E  EEE
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of PI0001974 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 16  PHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRHTKVNGRGRRVRMPAL 75
           P S PP    S + + SS AT T             +  S+KDRHTKV+GRGRR+RMPAL
Sbjct: 34  PRSTPP--EDSTLATTSSTATAT------------TTKRSTKDRHTKVDGRGRRIRMPAL 93

Query: 76  CAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSAMASSARSV 135
           CAAR+FQLTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++
Sbjct: 94  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTL 139

Query: 136 S 137
           S
Sbjct: 154 S 139

[Close]

BLAST of PI0001974 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 63/79 (79.75%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 54  SSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGT 113
           SS+KDRHTKV GRGRR+RMPALCAARIFQLTRELGH+SDGETI+WLL+QAEPSIIAATG+
Sbjct: 76  SSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGS 135

Query: 114 GTVPAAPISTVSSAMASSA 133
           GT+PA       SA+ASSA
Sbjct: 136 GTIPA-------SALASSA 147

[Close]

BLAST of PI0001974 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 11  PSSSDPHSQPPTAPHSVVGSNSSPATITHQSLLPRKSTTSLSSSSSKDRHTKVNGRGRRV 70
           P S    SQP T    ++ +    A +  +          L  +S+KDRHTKV+GRGRR+
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQEESAVVAAKK-------PPLKRASTKDRHTKVDGRGRRI 138

Query: 71  RMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSAMAS 130
           RMPALCAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ S
Sbjct: 139 RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRS 196

Query: 131 SARSVS 137
           S  S+S
Sbjct: 199 SGSSMS 196

[Close]

BLAST of PI0001974 vs. TAIR 10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-27
Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 41  SLLPRKST-TSLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWL 100
           SL P  ST   L  +S+KDRHTKV GRGRR+RMPA CAARIFQLTRELGH+SDGETI WL
Sbjct: 59  SLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWL 118

Query: 101 LRQAEPSIIAATGTGTVPAAPIS 123
           L  AEP+IIAATGTGTVPA  +S
Sbjct: 119 LENAEPAIIAATGTGTVPAIAMS 141

The following BLAST results are available for this feature:

BLAST of PI0001974 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJK7	5.6e-36	58.82	Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1	[more]
Q9LSD5	6.2e-27	79.75	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q9C518	6.2e-27	58.68	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q93Z00	1.8e-26	53.97	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q53PH2	5.2e-26	68.60	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]

BLAST of PI0001974 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH86	2.6e-113	95.11	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV...	[more]
A0A1S3CGZ3	3.0e-101	93.66	uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=...	[more]
A0A5D3C791	2.6e-100	92.68	Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1EK07	4.5e-89	84.95	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE...	[more]
A0A6J1IR93	5.7e-84	82.52	transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4...	[more]

BLAST of PI0001974 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143267.1	2.8e-101	94.63	transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein ...	[more]
XP_008462463.1	6.2e-101	93.66	PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo]	[more]
TYK07305.1	5.3e-100	92.68	transcription factor TCP11-like [Cucumis melo var. makuwa]	[more]
XP_038882900.1	1.2e-91	87.80	transcription factor TCP11 [Benincasa hispida]	[more]
XP_022926085.1	9.3e-89	84.95	transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription...	[more]

BLAST of PI0001974 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37000.1	4.0e-37	58.82	TCP family transcription factor	[more]
AT1G58100.1	4.4e-28	58.68	TCP family transcription factor	[more]
AT3G27010.1	4.4e-28	79.75	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT3G47620.1	1.3e-27	53.97	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT2G45680.1	8.3e-27	74.70	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 55..151 e-value: 1.5E-30 score: 106.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 56..110 score: 27.853064
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..58
None	No IPR available	PANTHER	PTHR31072:SF4	TRANSCRIPTION FACTOR TCP16-RELATED	coord: 39..138
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 39..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001974.1	PI0001974.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity