![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
PI0001936 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTTCAAATTTAAGCCGTTGATAAATAAAAATGAAATAATTTTGGGTAATAGCCCTTCGATTTTTCAATGATTATTAGTATATCGTTGCTGCTGCAGAATTCGACCACTCCAACGTCCGTCGTCTTCCCCTGCTCCAGTCGACCGTCGGAGTGTACACTGTACGTCATCCACTATCTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGGTATTTTTCAATTCCGGTTTTTGTTGCAGCAATTGCGTTTTTCGAATGCTTTTATATTTTCTTTCCTTCCATTTTGTGAAATGATTGAAGATTCTATTTGACTGTGGATGCTAAGTTGTTGGTTTGGTGTTGACTGTGGATGCTAAGTTGTTGGTTTGGTGTTGTACACCACATGTTTGACGATATTCCTCACAGAGCTTTTGCTCGTTTTTGCTGCGTGTTAAGCTGTCTAGTAGTCGGTTTTTGATTAGGAACTCCATAATTTGAGAATTAGACAGGTAAGATAATCGACATATCTTTTTAATTCTAAAAGTGGATAATTTGTATCCCATCTGAACAAAATAGGAAATATTGGAATTCTAGAAAAGTTTACGAATGTACAACCATTTTTCACTTTTGATCAGGCTCTTGTCTCATGTTGTGTGTTCTGATGGTTTTGATTGGATTTCCCCAGCTGAAATTTCGCAGAAACATTTAGATATTTATTGTCTTATGTTGTGTAGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTCTACATGCTTCTTTACAACGTGCTCATTTTTGCTATTGGTTATGCATCAATTTCTTTTTCCACTTGGCAGATTATATATTTAATGCATCTCTATATTCCCCTATTACCTGTTTTTCTTCTTAATAGACAAAATAATCTCAAATAGAATATAGAAGGAATTACCTGAATATCCGCACTAAGATATTAGATACTGATGCCTTACTACCCCTTTACCTTACATTTCTGATGGGCATATGAGTAATATAAGTATGGTTGAGAGATGACATTGATCGGCTTGTTATGTTTGTAACCCAATCATGTAAAATGATTTAACTTCCAAGAATGTCAACAAGTTCTTTGGGTGATTAAGAAGAAGATATTTATATTTTTTCCTTTTTGGTTGCCATGTTTGCTGACCATTGCTTTAAATCCTTGCTCAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTAGGCTTCTAATCTTGTATGGTGAAGGCTTGATAATGTTTGACATTATTGTGCTTCATTTAGTTATGGTGAAGGCTTGCTAGACTTTTGAATGTTTTTAACAATCTGATTGTATGACGTATTGATGTACATGTCCAATGCTAATTTGGTAGGACAAATTTTTCTGCAGTATGTTCACACCTCCCGTTAATATTCTAATGCAACTTTTTTTTACTAGCTGATAGTTCCATATTATAATTCACAGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGGCAAGCCTCCTTTTCTTGACTACTTTTACGTTCCTTCCTAAATTGGTCATTTCTTCATATTGTTAATGTGCTATGTCTATCAGGAGTTTGCCCAGCAACCACTAGGTCTTTTCACCCTTATAACGTTAAGGTTTGATTATCTAATGATTCATTCTCTTTTACTTCTACCAGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGTACAACAATCCTGTCAAAATAACAGTTCGTAGCATCTTGAGTGGCTTTATTGTTCTGTTGTCAAGAGAGAAACACATTATTTTACTTTTAGGAGTCAGAATTATGAAATCAATCTGCTGCTGATCGCTTCGCTTTTCTTCAACTGCTTGGATAGATTATATCACAAGCATTTCAAAACGCAATACATTGGTTTAGAATTATCAAAACAGAGTTCAACATTCATTATTCCACACGGGAAAGACTTGAATGAAGATGATGTTCTCTGTTAGACTTACCCATAACATAACAATGTAATTGATTGCTTTAGCTGCTATGGTTCGCTACACGCCATAATTTGTTTAGTTTCTCTGAGATCGAATCTTACATGACCAATTATTGATGAAGTTGTTTACTTTGGATGGTAATTGGTAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGGTGGCTATCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAAATAGATACTTCGGTCTCATGAATTGTAGATGTATCTGTCAATCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAAATGAAATATGTTACAATTCTAAATTTAAATTTTAGAAAATGTTGCAAATTTAAACCTTTGATAAGGTTTCGTTTGAAATATCATTAAAA AAAGTTCAAATTTAAGCCGTTGATAAATAAAAATGAAATAATTTTGGGTAATAGCCCTTCGATTTTTCAATGATTATTAGTATATCGTTGCTGCTGCAGAATTCGACCACTCCAACGTCCGTCGTCTTCCCCTGCTCCAGTCGACCGTCGGAGTGTACACTGTACGTCATCCACTATCTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGGTGGCTATCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAAATAGATACTTCGGTCTCATGAATTGTAGATGTATCTGTCAATCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAAATGAAATATGTTACAATTCTAAATTTAAATTTTAGAAAATGTTGCAAATTTAAACCTTTGATAAGGTTTCGTTTGAAATATCATTAAAA ATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAG MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQHVKFLFENRI Homology
BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8W566 (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana OX=3702 GN=At3g15140 PE=2 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.4e-104 Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q5FVR4 (3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-23 Identity = 63/205 (30.73%), Postives = 106/205 (51.71%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q7TMF2 (3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2) HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23 Identity = 63/205 (30.73%), Postives = 105/205 (51.22%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8IV48 (3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22 Identity = 62/205 (30.24%), Postives = 105/205 (51.22%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8C460 (ERI1 exoribonuclease 3 OS=Mus musculus OX=10090 GN=Eri3 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22 Identity = 62/208 (29.81%), Postives = 105/208 (50.48%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A1S3CJV9 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1) HSP 1 Score: 657.9 bits (1696), Expect = 2.2e-185 Identity = 317/326 (97.24%), Postives = 320/326 (98.16%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A0A0L4N2 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1) HSP 1 Score: 656.0 bits (1691), Expect = 8.3e-185 Identity = 314/326 (96.32%), Postives = 319/326 (97.85%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1F6E0 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita moschata OX=3662 GN=LOC111442549 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 3.2e-168 Identity = 286/326 (87.73%), Postives = 303/326 (92.94%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1IG11 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita maxima OX=3661 GN=LOC111476907 PE=4 SV=1) HSP 1 Score: 600.1 bits (1546), Expect = 5.4e-168 Identity = 285/326 (87.42%), Postives = 304/326 (93.25%), Query Frame = 0
BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1CCI3 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica charantia OX=3673 GN=LOC111010332 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 3.0e-158 Identity = 274/329 (83.28%), Postives = 300/329 (91.19%), Query Frame = 0
BLAST of PI0001936 vs. NCBI nr
Match: XP_008463707.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo]) HSP 1 Score: 657.9 bits (1696), Expect = 4.5e-185 Identity = 317/326 (97.24%), Postives = 320/326 (98.16%), Query Frame = 0
BLAST of PI0001936 vs. NCBI nr
Match: XP_004146041.1 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus] >KGN55096.1 hypothetical protein Csa_012433 [Cucumis sativus]) HSP 1 Score: 656.0 bits (1691), Expect = 1.7e-184 Identity = 314/326 (96.32%), Postives = 319/326 (97.85%), Query Frame = 0
BLAST of PI0001936 vs. NCBI nr
Match: XP_038896828.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispida]) HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175 Identity = 301/326 (92.33%), Postives = 310/326 (95.09%), Query Frame = 0
BLAST of PI0001936 vs. NCBI nr
Match: XP_022935722.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata]) HSP 1 Score: 600.9 bits (1548), Expect = 6.6e-168 Identity = 286/326 (87.73%), Postives = 303/326 (92.94%), Query Frame = 0
BLAST of PI0001936 vs. NCBI nr
Match: XP_022976542.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima]) HSP 1 Score: 600.1 bits (1546), Expect = 1.1e-167 Identity = 285/326 (87.42%), Postives = 304/326 (93.25%), Query Frame = 0
BLAST of PI0001936 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 380.2 bits (975), Expect = 1.7e-105 Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|