PI0001935 (gene) Melon (PI 482460) v1

Overview


Name	PI0001935
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 20449427 .. 20451681 (+)
RNA-Seq Expression	PI0001935
Synteny	PI0001935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCGAACACTTCAGCCTTCAGAAACGCTTTATACTCCGCCGCACACCTCATTCAGCATCTGCTTGCCAAGCTCGCATGCTTCACCACAAACTCCAAGCTCGCATGCTTCGCCACAAACTCCAAGCTCGCCTACTCAGCAAGCAAGACCAAATCGCATTGCAATCTGCCATAACCACCAAGCCCACAAGCCCAAGCCCAAGCCCACTGTAACAAAATAACTGCCAAATTGCAGTTATTTTCTAAAAATAACTTCCTTTTAGAAACCTATAAATACCCCCTTGTAATTCATTTCAAGACTTAGACTTGAACTTCATAATTCAATTCATAATACAAAATCTATAGAATTTTGATTTCTCTATACTTTTTGCATATCAATTTCCTTACTCTTACTCTGCCTAATTCTCCATAGAAATTTCTCTTCACAAGATTTTAGTCAATTTGCTGAAAAATGGGTAAAATCTCATCAATTTTCCACCAAGTTTCTATGGAGTAATCCTTTCAATAAGGACTAGAGGTCTAGTCTCACCTTCCTTGAGAAATAAGAGGTACTCTTCTCGCCTTCTTTAATTTCTTTGATTGTGCACTTCCTTTCACAATTATGTTGAATTTGAATGTTATAATAGGTTTCTAGGGCCTAGAATTTTCATCCAAATTCATGTTCTAATCGCCTAAAGCGCTGAGCTTATAGTTGAATTGTGATTGCTTAATATGCTAGATGACCAAGTAAATTGTCTATAATTCTACTCGCCCATCTCGCATGTTAACATTGAAGTGAACCTTAATTTTGTTAATAAGTGGCTGACCTTTTTAACAAAAATTGAATGAACATTTTTTGTTTCAATTAGAATAAGCCTTAATCGCTGATATAAGTTCTTACTCTAATTGATCCTTCTCGCGTAATTCCTCTGTCTAAATCAGAATGTGTTTTGATCGTTGAGACAATTGCACGTCTTGATTAATTCTTCTCTGCTCGCATAATTGAATAGTGTTAATTAAGAGAAGTCTTGATCGCTGAGACAATTCATATCTCAATTAACTCTTCTCTCTTCTCGCATAAGTCCATCGCATGAGTTCATTCTTGTTATTTTTCTAAAGAAGATTCATTTTAAATCTTTTCCTCTTACTTCTATGATGGGAAATGTGAATAGCTAGTCCTCGATAAAGTCCTTATCGCATAAACTGTTTACAAGGAATTGATTAAATTCTATAGATTACACTATCTCGCTTACTTTACTTTACTGTTTTCTTATAATCTTTGTTTTCTCGCATAAACAACCATTCTTACTACTAATATCTTTTTTTTTTGTGTCTTGAAGCTTTCCTTTACTATTTTGAACCTAACAAATCATCTTGAAGTCGCGGTTTGCTCCCTTGAGTACAACAACTCGAATCTCAAATATCTTACCACTACATTCGTAATCTCACCATTCCCCTTCTTCCCCATCTTCAACCTCATTTCCAAAATTCAAATTCTCGAGCATTCACCTTATTCTCTGTTCTTTGCTTTTCCAGCGAACTTCCGAGCCTATTTCCACCCTTCCAAAAGAATTTCAATGGCTGAACGCAAGTCGTATACGCCTTCTAACGCCCATTCTCCCCTAATGAGAAATAAGAAACCTTCAGTCCCCCGTCTCTCCTAGCAAAAACCTCAATCATAAACCTAATTATGACTGGCCAATTCAAAGAGCTTTCGTTCGTAGCTCTTTGAACACCAAATACCTTCGAAGCAAAGGACCAAACCCTCTCTTTCGATGAAGGAAACCTTTAAAATATAAGGTCAATCTTCCAAAAAACCCCTTCAAAACCACATACATGGTGCAACCTGATGGGCTTGAATTCAAAAATGCATAACGCCTAATCAGGCGAGCTGAAAGCCAAAACACCTCCTCTAGCAAGTTACATAGGCGAGATGAAGAGGAAGTATTTGGAGAACTCTGTGACTTAGACCATGTTAAGACGCGTGGAGTGGAAGAAGAAGTTGTGAACAAACCCATGAGAAAGCTAGTGGTCCAAAAACACGACAAAGGTATGGTGTTAGTGTTAGAAGAGGAGGATGTAGAGGGCAACAAAAAAAATGTTAAAAGAATATTGAGATGGAAATAGATAATGATAATGACGTTGTTGCACTCCTCACCTTGCTAGAAGAAAGGCAAGCAAATAGAAGAAAAGAGAAGAAGAAGAAAAAAGGAAGAGAGCGGCGATTCGAGATCATATTCCTGAATAAGAGTTTGATAGAACTGCATGGCTAG

mRNA sequence

ATGCCTCGCGAACACTTCAGCCTTCAGAAACGCTTTATACTCCGCCGCACACCTCATTCAGCATCTGCTTGCCAAGCTCGCATGCTTCACCACAAACTCCAAGCTCGCATGCTTCGCCACAAACTCCAAGCTCGCCTACTCAGCAAGCAAGACCAAATCGCATTGCAATCTGCCATAACCACCAAGCCCACAAGCCCAAGCCCAAGCCCACTGCGAGCTGAAAGCCAAAACACCTCCTCTAGCAAGTTACATAGGCGAGATGAAGAGGAAGTATTTGGAGAACTCTGTGACTTAGACCATGTTAAGACGCGTGGAGTGGAAGAAGAAGTTGTGAACAAACCCATGAGAAAGCTAGTGGTCCAAAAACACGACAAAGAAGAAAGGCAAGCAAATAGAAGAAAAGAGAAGAAGAAGAAAAAAGGAAGAGAGCGGCGATTCGAGATCATATTCCTGAATAAGAGTTTGATAGAACTGCATGGCTAG

Coding sequence (CDS)

ATGCCTCGCGAACACTTCAGCCTTCAGAAACGCTTTATACTCCGCCGCACACCTCATTCAGCATCTGCTTGCCAAGCTCGCATGCTTCACCACAAACTCCAAGCTCGCATGCTTCGCCACAAACTCCAAGCTCGCCTACTCAGCAAGCAAGACCAAATCGCATTGCAATCTGCCATAACCACCAAGCCCACAAGCCCAAGCCCAAGCCCACTGCGAGCTGAAAGCCAAAACACCTCCTCTAGCAAGTTACATAGGCGAGATGAAGAGGAAGTATTTGGAGAACTCTGTGACTTAGACCATGTTAAGACGCGTGGAGTGGAAGAAGAAGTTGTGAACAAACCCATGAGAAAGCTAGTGGTCCAAAAACACGACAAAGAAGAAAGGCAAGCAAATAGAAGAAAAGAGAAGAAGAAGAAAAAAGGAAGAGAGCGGCGATTCGAGATCATATTCCTGAATAAGAGTTTGATAGAACTGCATGGCTAG

Protein sequence

MPREHFSLQKRFILRRTPHSASACQARMLHHKLQARMLRHKLQARLLSKQDQIALQSAITTKPTSPSPSPLRAESQNTSSSKLHRRDEEEVFGELCDLDHVKTRGVEEEVVNKPMRKLVVQKHDKEERQANRRKEKKKKKGRERRFEIIFLNKSLIELHG

Homology

The following BLAST results are available for this feature:

BLAST of PI0001935 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001935 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001935 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001935 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001935.1	PI0001935.1	mRNA