PI0001896 (gene) Melon (PI 482460) v1

Overview


Name	PI0001896
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	50S ribosomal protein L19, chloroplastic-like
Location	chr12: 20179745 .. 20184701 (+)
RNA-Seq Expression	PI0001896
Synteny	PI0001896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGCAGGAGCACACTCTTGTAAAATAAATAAATATAAATGAACAAAAGAAAGCGAAAAACCCTAAACCATTTCGTAAAATCAAAATAACTCTTTCATCGTCATCTTCTTCTTCTTCTTCATCTTAACGCCGTCTCCTCCTCTGTTTCACCCCATTGGTTTCGCCTCCGCCGTCGTCTTTTTTACGCTCGTGCCGCCGAACCCTCTTTCCCTGCGGTTTTGCACTGATTTCTAACTCCTTTGTTGTTTCTGGTATTCTTCCAATCTTCATCTACGTCTTTTTTTTCACTTGAAAACACATGGGTTTGAACTTGTCCAATGAAACAATGAAGGAGTTTTTTCATTTTTTTTAATAAAAAAATTGAAACGTGGTTTGTATTTGGCTGATCTGATTCGGACGTGAATCAATCATCCAATTCTCTACTTTTTTTTTCTTTTTTGGTTTCATTTTTCGAATTTCTTGTTTACTTGTGATCCAGAATAAGCTGACATCTCCAGAAATCTTGATCAGCAATGTATATTTAAGCTACATTGTTTATACGCTGCTTCACTTCCATCGTGTTTCTTCTCACCTGCCTGTTTTGTAACAATTCTACGGAGATTGTTTTATATTACTCAACGCTCATGGAGTTTCTGTGGATAATGCAGCTGGAAATCTAGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGTTGGCTGTAGCTGCTCGGCTCCAATGTCGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATTCGGAAGCCTTCGTATGTATTTCTGTTCGTTTAACTATTTTTCATCTTATGGTCGTTTACTAGTATGTTTTGTTCTTGAGTTGTTTTCGGAGGTTCTATAACTATTCAGTAAATTCACTTTGGTTTATACTGCATATATAATTAATGACATTTAGTCTAGTTCAAATTGCAAACTTTTATGAATTCGTTTGCGCTTAATGTTTTAGTTCATAAGTAGCGAGACAAGTAAATCTCGTGATATCGGTATTGGCCAACACCTGATTGGTGGTAGGGGAGAGGGTAATATGTATAGTATCTGATCAATTATTTATGTTATGAACATGCCCCTAAACTGACCAGACGTGATATGTGCTGAACGTCTTATTGCTATAAAGTAACATAGAGTGTGAATACATGAGCTAGAACTGGCTCTTGAATTTAATTATGGATCTGAGCCATTTGGTGTGCCTGTGGGAGTGCCTGCTCGCGAACTACCTTTCAGGCGGCAATTCTTTTTTGGGGGGTTAGTGGGGGGATGGGTGTTCTTTGTTGGAGGGAAAGTGGTTTTGGACTCCCCTTTTAGGGAGAAGAGTGTTGTGGCAAGCAAGCTTCTTTGCTTATTTTGTGGAGTATTTGGTTGGAGTGTAATAATTGAATTTTTAGGGATGTGGAGAAATCTAGAGAGGAAGTTTGGTAGTTGGTGAGGACTGAGGTCTAATGCTTCCATTTGAGTTTCATTCACTAGATTGTTTTGTAATTATGATATTGATCTTGTTCTCTTGGATTGAATTTTTTTTTTTTTTTCTTTGTAGTTAGTGTTGGACTCTTGTTTTTCAGGAGCTTTTTCCTTTTATTCTTTCATTTTTTCAATGTAAGGTTTTTTGTCTCAGATTCTTATTTATTATGTATCCTATTTTCCCTCTCAACAAAACAAGTGTAGAGAACCCCCTATTTATTCCGTAATTAGTCTGTCTGAGCTGTATTTAGCTTGCGTCAAGTTGATTAACTTAACTAGGAAAACAATGTGGTTATAGGTCTTTTCTTCTATGATCCTTGATAATTGGTGTCTTTCTGTAATTTCCTTGGCATTTGTGGAGATTGGTTATCTTCCTCTTATCTACCTCTTTTCTTTCATTGTTGCTAAAAGTTAGAAAAAACTGTCAACTATCCTCATGAGAATTTTTTTCAGAAACTGTGTATAGTACTCGTTGAGAAAGACCATACACAAATGTTTTCTTTCAATGTTGCTGAAAATTACTTGCTATTGGTTTTTGGGTACTCATTGGAAGCAATATCTATTAATTAAGAGTTTATTTTGTGACGTATCACTTTGTAACAATTTATATAAATATTTATCAGAAAAATATGAGCTCTCAAATGGAATTTGTGCCTTTGAGGAAACATGCATCTTCAACTTTTTCAGCATTCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAACTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATGATTCTGTTGTACCACCTCGCATCAAATTTAAGAGACTTGATAAAACTTCAAGACACATAATGCAGGTATTCGCATTTCTTAGTATTGTTGGAAAAGAAGTAATTTCATTTCGTCTTCCCTTCTCTTTGCTTTCAATACATTGTTTCCTTTTACTCACAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGGGAAATTCCAGATATAAGGCCAGGCTATATTGTGCAGCTCAAAGTGGTAGAGTTCATTACTTATATTCTTTCATTTTTGTCTCTATGATAGTTGTTGTCTATGTAAAAAGAAGTTTAGAGTTCATTTGAGTCAAATCATATCACGATGTTTCATTACTTGTAGACGGTTTTTATTCCTAAAGGCAGTTGTAGATGAGTTCGTCGAATAGCTTTTGGCTTTTATTGTCAGATGAGTTTATCGAACAGCTTTTGGCTTTTGAACAGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTCCCTCTGTAAGTAATGCTGACTTTTTGCTATAATTATTTTCTGCAAAAGTTACTTTCCCAATTTCATTGTCGATGTCCCTGCTCACCTTTGTGATGAAGAACAGAAGAATTGTGTATCCGGGAAAAAGGACCCGGATACATTTAGACATTCACCGGACACGTATCTGGGACACTAAAAAATGTGTCAAGATTATTATTATAATTATCCTAATTTTGGACAAGTCTTTCAAAAATATTTAACCTAAAAATGGGGGGTGGGGTTGGGAATGATTTTCTGATAGACTTTATCCATAAATATTGGATTATTGATCCATCCTAAAGTATTAGGACGACTTTTTCTTTCTCTGGTCACTGCCAACTAGACTTTCTACATCTTTTAAGATTTTAATATCATTAAATGACTTAACTTTGTATGTTTTTATGAGTTGTACTTTTATCTATAAAGAAGTGTCAATATTTTATGTATTTTATTTTAAAAAACGTGTCCGCAACATGTATGTATCCTATTTTTTAGAAATTGATGTGTCATCGTGTCTGTCGTCTTTGTGCTTCTTTAGAATTTAATACAAATCTACCTTAAGGTGCAAATCTTTATGAATTTTGAGTCTTCATTAAATTCGGAGAGAAATTGAGCCGGACGGATTTGGGGGGAGGGGTGTTCACATGTCAATTTTGAAAGTTCATGTAACTATATCATATAAATATATAGGACATTAGGTCTATGAGTTGGTCTAATATAGAATTTAGTATTCTACTAACTATTTCCTAGAATTTAGTATTCCACGAATTACCTTGGCAATTAAATGTAGTGGAGTGGAGATATTTGTGAGCATAGTTGAAATGTGTGCAAGCTAGTTTGACCACATGCTAATACAAAAAAAAAAATTAATTAAAAAAATACTGATACAAGAGGGTGTTATCAGTTTGGTTCGGCTCGGTTTGAGTGTCAAACTGAAGCTGAACCATTAGAATTTTTGAAGAAATTGAAGAACTGCAGTGGAACTGCTAAAGATATTCACCGAACCGGTTACTAACAGTTTGCTTGGTTTGGTCCACCGGTTCTCATCTCTTTAATCAGGCGTGGCCTAGTATTGGTCTCCAAGCGAATCGCAGGTTCACTTTGCTCTAGCCAAACTCGAAACCGACCAATTATAGTTGGTTTTTAAACTGGAAACAAAGCCGTCCATCAATCCAAACTGATATTAAAGTGAACTGACAGTGGTTTCGGTCAGTTTATTTCAGTTTTTAGGGTTTTTTGGTTTTCCCTTCACCCCTAGATACAAGTAAAAATTTTATGGTGATTGGTGAACAATACTTATTGAAGGTTATGTATTAATATGAACATATATATGTATGGTCTTTTTCTATATAATAGTTTCTTTAAATGATACTCGCCACTGGTAGCTTTGTGCTTCTGACTAAAATAAGTGGTTGATGCATGACAGATACTCACCGAACATAAAAGAGATTAAGGTGTTGGAGAAGAAGAAAGTGCGCAGAGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGGTTTCTATTCAATGGGATCAGAAGTGTTTCCGTAACATGGAGCGTTTAAATTCTTTTGAGCGAAACATCTCACGAGCTTTCATGACTATTTTATCCTGTTTATGCCTGGAGGATCAGCATGAGAAACTAGTGGAGCTAAAATAAGAAATAAAAAAATGACTTCACATTGATTGCCTCAAGAAGAAAATGTTCGTTCTTTTATATGATTAGTTGCTGAAGCAAACCATGTCATCATTTTATCTTTTTGCTGATCGGTTGCCTGATTTTGCCCCTTCTTTGGAATGCTAAAGAGCTTGCTGGTTGTAATGTCTGTGGCTGATGAATATTATCATCTTTCTGAATGAAGGATATATTTATTATTAATCATTAACAGGGTTTCCATTCCTTACAAACCTTC

mRNA sequence

GGGAGCAGGAGCACACTCTTGTAAAATAAATAAATATAAATGAACAAAAGAAAGCGAAAAACCCTAAACCATTTCGTAAAATCAAAATAACTCTTTCATCGTCATCTTCTTCTTCTTCTTCATCTTAACGCCGTCTCCTCCTCTGTTTCACCCCATTGGTTTCGCCTCCGCCGTCGTCTTTTTTACGCTCGTGCCGCCGAACCCTCTTTCCCTGCGGTTTTGCACTGATTTCTAACTCCTTTGTTGTTTCTGGTATTCTTCCAATCTTCATCTACGTCTTTTTTTTCACTTGAAAACACATGGGTTTGAACTTGTCCAATGAAACAATGAAGGAGTTTTTTCATTTTTTTTAATAAAAAAATTGAAACGTGGTTTGTATTTGGCTGATCTGATTCGGACGTGAATCAATCATCCAATTCTCTACTTTTTTTTTCTTTTTTGGTTTCATTTTTCGAATTTCTTGTTTACTTGTGATCCAGAATAAGCTGACATCTCCAGAAATCTTGATCAGCAATGTATATTTAAGCTACATTGTTTATACGCTGCTTCACTTCCATCGTGTTTCTTCTCACCTGCCTGTTTTGTAACAATTCTACGGAGATTGTTTTATATTACTCAACGCTCATGGAGTTTCTGTGGATAATGCAGCTGGAAATCTAGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGTTGGCTGTAGCTGCTCGGCTCCAATGTCGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATTCGGAAGCCTTCAAAAATATGAGCTCTCAAATGGAATTTGTGCCTTTGAGGAAACATGCATCTTCAACTTTTTCAGCATTCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAACTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATGATTCTGTTGTACCACCTCGCATCAAATTTAAGAGACTTGATAAAACTTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGGGAAATTCCAGATATAAGGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTCCCTCTATACTCACCGAACATAAAAGAGATTAAGGTGTTGGAGAAGAAGAAAGTGCGCAGAGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGGTTTCTATTCAATGGGATCAGAAGTGTTTCCGTAACATGGAGCGTTTAAATTCTTTTGAGCGAAACATCTCACGAGCTTTCATGACTATTTTATCCTGTTTATGCCTGGAGGATCAGCATGAGAAACTAGTGGAGCTAAAATAAGAAATAAAAAAATGACTTCACATTGATTGCCTCAAGAAGAAAATGTTCGTTCTTTTATATGATTAGTTGCTGAAGCAAACCATGTCATCATTTTATCTTTTTGCTGATCGGTTGCCTGATTTTGCCCCTTCTTTGGAATGCTAAAGAGCTTGCTGGTTGTAATGTCTGTGGCTGATGAATATTATCATCTTTCTGAATGAAGGATATATTTATTATTAATCATTAACAGGGTTTCCATTCCTTACAAACCTTC

Coding sequence (CDS)

ATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGTTGGCTGTAGCTGCTCGGCTCCAATGTCGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATTCGGAAGCCTTCAAAAATATGAGCTCTCAAATGGAATTTGTGCCTTTGAGGAAACATGCATCTTCAACTTTTTCAGCATTCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAACTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATGATTCTGTTGTACCACCTCGCATCAAATTTAAGAGACTTGATAAAACTTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGGGAAATTCCAGATATAAGGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTAGAATAA

Protein sequence

MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLSGSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSSRGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTLE

Homology

[Close]

BLAST of PI0001896 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11
Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 93  HASST--FSAFQSSRPHFFQLAEIATPFSSRGI---ATTSSMESALQGSPAVDDSVVPPR 152
           H+SS   F+     R  F   AE +T   +  +   A  +  E   + + A +++  P +
Sbjct: 51  HSSSNFGFAIDSKKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWK 110

Query: 153 IKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKRRISTLKGIV 212
            + K  D     IM +L+K+A+E  +  R +P +R G IV++K+EVPENKRR+S  KGIV
Sbjct: 111 TRVKLGD-----IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIV 170

Query: 213 IARRNAGLNSTL 220
           ++R+NAG+++T+
Sbjct: 171 MSRQNAGIHTTI 177

[Close]

BLAST of PI0001896 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 125 TTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPG 184
           T  ++E  ++  P        PRIK          +M IL+++A+E  +  R +P+IR G
Sbjct: 91  TEGNVEEVVEAKP-----TRKPRIKL-------GDVMGILNQKAIEVAEKVRPVPEIRTG 150

Query: 185 YIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTL 220
            IV++K+EVPENKRR+S  KGIV++R+NAG+++T+
Sbjct: 151 DIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 173

[Close]

BLAST of PI0001896 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 57/159 (35.85%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 65  RSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQS--SRPHFF--QLAEIATPFSS 124
           R FS S N  S    + +S   F       SS FS+  S  +R  F     AE ++   +
Sbjct: 36  RRFSLSSNCRSNLMVSRASSNLF-------SSNFSSIFSFPARNSFVVRSEAEDSSDAPA 95

Query: 125 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 184
             +A  +  E  ++     ++   PPR +  +L      IM IL+K+AV   +  R +P 
Sbjct: 96  ESVAVVAEEELPVESEAEAEER--PPRQQRVKLG----DIMGILNKKAVHAAEELRPVPG 155

Query: 185 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTL 220
           IR G IVQ+++EVPENKRR+S  KGIVI+R+NAG+++T+
Sbjct: 156 IRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTI 181

[Close]

BLAST of PI0001896 vs. ExPASy Swiss-Prot
Match: B6IP95 (50S ribosomal protein L19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rplS PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 159 HIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKR-RISTLKGIVIARRNAGLNS 218
           +I+Q L++E V ++ A + IP   PG  V++ V+V E  R R+   +G+VIAR+NAGLNS
Sbjct: 2   NILQQLEQEQVAKLTAGKTIPAFSPGDTVRVNVKVVEGTRERVQAYEGVVIARKNAGLNS 61

[Close]

BLAST of PI0001896 vs. ExPASy Swiss-Prot
Match: Q2G8H1 (50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplS PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.8e-05
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 159 HIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKR-RISTLKGIVIARRNAGLNS 218
           +++Q L+ EA+ E KA +EIPD R G  V++ V V E +R R+   +G+ IAR N GL S
Sbjct: 2   NLIQQLEAEAIAEFKAKKEIPDFRAGDTVRVGVRVVEGERTRVQAYEGVCIARSNRGLGS 61

[Close]

BLAST of PI0001896 vs. ExPASy TrEMBL
Match: A0A0A0LV41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 205/218 (94.04%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGD GCSCSAPMSMENSFTIP LFGKSYGSL 
Sbjct: 138 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 197

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GS LRSFSRSGNQY EAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAE A PFSS
Sbjct: 198 GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 257

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSMESALQGSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 258 RGIATTSSMESALQGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 317

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 318 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 354

[Close]

BLAST of PI0001896 vs. ExPASy TrEMBL
Match: A0A1S3CHF9 (50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 203/218 (93.12%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGD  CSCSAPM MENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GSL RSFS SGNQY EAFKNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAEIA PFSS
Sbjct: 61  GSLWRSFSWSGNQYPEAFKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSM SAL GSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 RGIATTSSMGSALLGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 217

[Close]

BLAST of PI0001896 vs. ExPASy TrEMBL
Match: A0A1S3CHC3 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGD  CSCSAPM MENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLLRSFSRSGNQYSEAF-KNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFS 120
           GSL RSFS SGNQY EAF KNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAEIA PFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP 180
           SRGIATTSSM SAL GSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP
Sbjct: 121 SRGIATTSSMGSALLGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP 180

Query: 181 DIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           DI+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 DIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 218

[Close]

BLAST of PI0001896 vs. ExPASy TrEMBL
Match: A0A6J1GUP7 (54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 172/218 (78.90%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQ FRRINQLVRRQSPDAHFK IRGYPLNGD  C CSA MSME SFT   LFG  Y SL+
Sbjct: 1   MQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNPYESLN 60

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GSL RSFS+ GNQY EAFK+M SQMEF+P  K  SST  AFQS + H FQLAEIA PFSS
Sbjct: 61  GSLFRSFSKLGNQYPEAFKDMGSQMEFLPSVKRVSSTCPAFQSPKKHLFQLAEIAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSMESA QGS  +D  +  PRIKFKRLDKTS+HIMQILDKEAVEEVKA REIPD
Sbjct: 121 RGIATTSSMESAPQGSSGIDTDIT-PRIKFKRLDKTSKHIMQILDKEAVEEVKAKREIPD 180

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+T
Sbjct: 181 IKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTT 217

[Close]

BLAST of PI0001896 vs. ExPASy TrEMBL
Match: A0A6J1I0B3 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469331 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84
Identity = 172/218 (78.90%), Postives = 182/218 (83.49%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPD HFKLIRGYPLNGD GCSCSAPMSME      C FG  YGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDVHFKLIRGYPLNGDAGCSCSAPMSME------CSFGNPYGSLS 60

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GSLLRSFSR GNQY EAF++M SQMEFVP   H SS+ SAFQS RPH +QLAEIA PFSS
Sbjct: 61  GSLLRSFSRLGNQYPEAFRSMGSQMEFVPSGNHISSSCSAFQSLRPHSYQLAEIAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIA TSS ES+ QGSP VD  +   RIKFK LDKTS+HIMQILDKEA  EVKA REIPD
Sbjct: 121 RGIAMTSSTESSPQGSPTVDSDIT--RIKFKWLDKTSKHIMQILDKEAFGEVKAQREIPD 180

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+ GYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+T
Sbjct: 181 IKSGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTT 210

[Close]

BLAST of PI0001896 vs. NCBI nr
Match: KAE8652777.1 (hypothetical protein Csa_022701 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 205/218 (94.04%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGD GCSCSAPMSMENSFTIP LFGKSYGSL 
Sbjct: 232 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 291

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GS LRSFSRSGNQY EAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAE A PFSS
Sbjct: 292 GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 351

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSMESALQGSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 352 RGIATTSSMESALQGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 411

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 412 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 448

[Close]

BLAST of PI0001896 vs. NCBI nr
Match: XP_031743853.1 (50S ribosomal protein L19-2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 205/218 (94.04%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGD GCSCSAPMSMENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GS LRSFSRSGNQY EAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAE A PFSS
Sbjct: 61  GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSMESALQGSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 121 RGIATTSSMESALQGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 180

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 217

[Close]

BLAST of PI0001896 vs. NCBI nr
Match: XP_008462635.1 (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 203/218 (93.12%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGD  CSCSAPM MENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLLRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFSS 120
           GSL RSFS SGNQY EAFKNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAEIA PFSS
Sbjct: 61  GSLWRSFSWSGNQYPEAFKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           RGIATTSSM SAL GSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 RGIATTSSMGSALLGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           I+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 217

[Close]

BLAST of PI0001896 vs. NCBI nr
Match: XP_031743848.1 (50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_031743849.1 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_031743851.1 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 5.9e-104
Identity = 205/222 (92.34%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGD GCSCSAPMSMENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSLLRSFSRSGNQYSEA----FKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIAT 120
           GS LRSFSRSGNQY EA    FKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAE A 
Sbjct: 61  GSFLRSFSRSGNQYPEAFVCIFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAA 120

Query: 121 PFSSRGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHR 180
           PFSSRGIATTSSMESALQGSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKA R
Sbjct: 121 PFSSRGIATTSSMESALQGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARR 180

Query: 181 EIPDIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           EIPDI+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 EIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 221

[Close]

BLAST of PI0001896 vs. NCBI nr
Match: XP_008462626.1 (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDVGCSCSAPMSMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGD  CSCSAPM MENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLLRSFSRSGNQYSEAF-KNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATPFS 120
           GSL RSFS SGNQY EAF KNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAEIA PFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP 180
           SRGIATTSSM SAL GSPAV DSV+PPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP
Sbjct: 121 SRGIATTSSMGSALLGSPAV-DSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIP 180

Query: 181 DIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           DI+PGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST
Sbjct: 181 DIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 218

[Close]

BLAST of PI0001896 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 81/140 (57.86%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 80  NMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIATP-FSSRGIATTSSMESALQGSPA 139
           N S ++ F       ++T+         F  LA +    FSSR  +TT     ++QGSP 
Sbjct: 35  NESRKLGFDSFPSTRAATYLISSLKNAGFSSLAVVPKQNFSSRCFSTTG---DSVQGSPE 94

Query: 140 VDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKR 199
             D VVP RIKFKRLDKT++HIMQI+DKEAVEEV+  REIP+I+PGYIVQLKVEVPENKR
Sbjct: 95  -SDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKR 154

Query: 200 RISTLKGIVIARRNAGLNST 219
           R+S +KG+VIARRNAGLNST
Sbjct: 155 RVSIVKGVVIARRNAGLNST 170

[Close]

BLAST of PI0001896 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 86/163 (52.76%), Postives = 116/163 (71.17%), Query Frame = 0


Query: 58  SLSGSLLRSFSRSGNQYSEAFKNMSSQMEF--VPLRKHASSTFSAFQSSRPHFFQLAEIA 117
           S+S +L  + S S   +SE   N S ++ F   P  + A+   S+ +++      + +  
Sbjct: 17  SISNTLRFTSSSSCGSWSE---NESRKLGFDSCPSSRAATYLISSLKNAGFSSSAIPKQN 76

Query: 118 TPFSSRGIATTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAH 177
             ++SR  +TT   +S++QGSP   D VVP RIKFKRLDKT++HIMQI+DKEAVEEV++ 
Sbjct: 77  FTYASRCFSTTG--DSSVQGSPE-SDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSL 136

Query: 178 REIPDIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           REIP+I+PGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNST
Sbjct: 137 REIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNST 173

[Close]

BLAST of PI0001896 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31
Identity = 87/163 (53.37%), Postives = 110/163 (67.48%), Query Frame = 0


Query: 58  SLSGSL-LRSFSRSGNQYSEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAEIAT 117
           S+S +L   S S S   +SE    M     F P  + A+   S+ ++       + +   
Sbjct: 17  SISNTLRFTSSSSSSGSWSENESRMVGFDSF-PCTRAATYLISSLKNVGFSSSAIPKQDF 76

Query: 118 PFSSRGIATT-SSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAH 177
            +S R  +TT  S++S  QGSP   D VVP RIKFKRLDKT++HIMQI+DKEAVEEV+  
Sbjct: 77  KYSLRCFSTTGDSVQSTPQGSPE-SDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRNL 136

Query: 178 REIPDIRPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNST 219
           REIP+I+PGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNST
Sbjct: 137 REIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNST 177

[Close]

BLAST of PI0001896 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 93  HASST--FSAFQSSRPHFFQLAEIATPFSSRGI---ATTSSMESALQGSPAVDDSVVPPR 152
           H+SS   F+     R  F   AE +T   +  +   A  +  E   + + A +++  P +
Sbjct: 51  HSSSNFGFAIDSKKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWK 110

Query: 153 IKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPGYIVQLKVEVPENKRRISTLKGIV 212
            + K  D     IM +L+K+A+E  +  R +P +R G IV++K+EVPENKRR+S  KGIV
Sbjct: 111 TRVKLGD-----IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIV 170

Query: 213 IARRNAGLNSTL 220
           ++R+NAG+++T+
Sbjct: 171 MSRQNAGIHTTI 177

[Close]

BLAST of PI0001896 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 68.2 bits (165), Expect = 9.6e-12
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 125 TTSSMESALQGSPAVDDSVVPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIRPG 184
           T  ++E  ++  P        PRIK          +M IL+++A+E  +  R +P+IR G
Sbjct: 91  TEGNVEEVVEAKP-----TRKPRIKL-------GDVMGILNQKAIEVAEKVRPVPEIRTG 150

Query: 185 YIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTL 220
            IV++K+EVPENKRR+S  KGIV++R+NAG+++T+
Sbjct: 151 DIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 173

The following BLAST results are available for this feature:

BLAST of PI0001896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXX5	2.7e-11	34.85	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8W463	1.4e-10	40.00	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	1.4e-10	35.85	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
B6IP95	2.9e-05	44.26	50S ribosomal protein L19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]
Q2G8H1	3.8e-05	45.00	50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278...	[more]

BLAST of PI0001896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV41	5.2e-106	94.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1	[more]
A0A1S3CHF9	1.3e-104	93.12	50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3CHC3	3.2e-103	92.69	50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1GUP7	1.7e-85	78.90	54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1I0B3	1.5e-84	78.90	50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of PI0001896 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652777.1	1.1e-105	94.04	hypothetical protein Csa_022701 [Cucumis sativus]	[more]
XP_031743853.1	1.1e-105	94.04	50S ribosomal protein L19-2, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_008462635.1	2.6e-104	93.12	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X2 [Cucumis m...	[more]
XP_031743848.1	5.9e-104	92.34	50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_0317...	[more]
XP_008462626.1	6.5e-103	92.69	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucumis m...	[more]

BLAST of PI0001896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24240.1	1.3e-32	57.86	Ribosomal protein L19 family protein	[more]
AT4G11630.1	1.3e-32	52.76	Ribosomal protein L19 family protein	[more]
AT5G11750.1	1.9e-31	53.37	Ribosomal protein L19 family protein	[more]
AT5G47190.1	1.9e-12	34.85	Ribosomal protein L19 family protein	[more]
AT4G17560.1	9.6e-12	40.00	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 168..219 e-value: 2.3E-8 score: 34.0
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 63..219
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 150..220 e-value: 8.8E-9 score: 37.1
None	No IPR available	PANTHER	PTHR15680:SF9	39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL	coord: 63..219
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 159..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001896.3	PI0001896.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome