Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCATAAAAGGGTTCAAGAAATGCCAACAATTGGGGATGATATCAATGAGAGCAAGGTCAAGAGTGAAATGGCCTCGAAAAGCATGGACTCGTCAGACGACGGACGTGATGAGGACACAGAAGATGGAAAGGAAATAGAGGACTTGGCAGAGGAAGAAGAAAACAAGGTTAGTGTATTCATCTAATTTCGTGCCCTAACCAGATGTTGTATTGATTGACTATGTTCATGATGACTAAAGTTATGTGGAATGAAGGTTGGAGATGGACGTAAAGATGGTTCTGTGTCCGCTCGGACTTCGACACAAGAGACGGTTAGTATGTGTTTAATCTAAAGGTACTTTCAGCATTTATTAGTTCTTGGTTTAACTCTAACCAATTGATGGTTCTGTGCATTGAAGGATGAAAAGAAGGGTGAAGGTTTGTGTGAGTTGGCTGAGACATCGACAAAAGTAAAGGTTAGTCTAATTTCATCTTCCTATAATGGTCTATGCGCTCAGTTGCACCTTATTACTAACATTTCTTGTAGGATGGGACTTCGTGTTTACTTGCTATTGGGAGTCGGGCGAATGTTGTTGGGGCTGGCACTATATTCGACTACGACATGGAAGGGGATAACGTCAGGGTTTCTATGGACGTGGTTGTTGACGGTGACTGCTCCGTCCTTATTTAA
mRNA sequence
ATGAACCATAAAAGGGTTCAAGAAATGCCAACAATTGGGGATGATATCAATGAGAGCAAGGTCAAGAGTGAAATGGCCTCGAAAAGCATGGACTCGTCAGACGACGGACGTGATGAGGACACAGAAGATGGAAAGGAAATAGAGGACTTGGCAGAGGAAGAAGAAAACAAGGTTGGAGATGGACGTAAAGATGGTTCTGTGTCCGCTCGGACTTCGACACAAGAGACGGATGAAAAGAAGGGTGAAGGTTTGTGTGAGTTGGCTGAGACATCGACAAAAGTAAAGGATGGGACTTCGTGTTTACTTGCTATTGGGAGTCGGGCGAATGTTGTTGGGGCTGGCACTATATTCGACTACGACATGGAAGGGGATAACGTCAGGGTTTCTATGGACGTGGTTGTTGACGGTGACTGCTCCGTCCTTATTTAA
Coding sequence (CDS)
ATGAACCATAAAAGGGTTCAAGAAATGCCAACAATTGGGGATGATATCAATGAGAGCAAGGTCAAGAGTGAAATGGCCTCGAAAAGCATGGACTCGTCAGACGACGGACGTGATGAGGACACAGAAGATGGAAAGGAAATAGAGGACTTGGCAGAGGAAGAAGAAAACAAGGTTGGAGATGGACGTAAAGATGGTTCTGTGTCCGCTCGGACTTCGACACAAGAGACGGATGAAAAGAAGGGTGAAGGTTTGTGTGAGTTGGCTGAGACATCGACAAAAGTAAAGGATGGGACTTCGTGTTTACTTGCTATTGGGAGTCGGGCGAATGTTGTTGGGGCTGGCACTATATTCGACTACGACATGGAAGGGGATAACGTCAGGGTTTCTATGGACGTGGTTGTTGACGGTGACTGCTCCGTCCTTATTTAA
Protein sequence
MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGKEIEDLAEEEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVGAGTIFDYDMEGDNVRVSMDVVVDGDCSVLI
Homology
BLAST of PI0001890 vs. ExPASy TrEMBL
Match:
A0A1S4DU79 (uncharacterized protein LOC103486165 OS=Cucumis melo OX=3656 GN=LOC103486165 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 75/148 (50.68%), Postives = 99/148 (66.89%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV ++ T G+ +ESK+KS+MASKS+D+S+D D DTE+ EIEDL
Sbjct: 1 MNHKRVPKVATKGETTDESKIKSQMASKSIDTSNDANDHDTEEENIQVLEEEVEIEDLTI 60
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
E+++KVGD KD +C TSTKVKDGTS LAIG++ NVVG
Sbjct: 61 EKQDKVGDENKD-------------------VCVSTGTSTKVKDGTSYRLAIGTKDNVVG 120
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSV 141
AGTIFDYD++GDN++VS+D+VVDG+C +
Sbjct: 121 AGTIFDYDIDGDNMKVSVDMVVDGNCFI 129
BLAST of PI0001890 vs. ExPASy TrEMBL
Match:
A0A5A7V4B5 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005130 PE=4 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 9.3e-24
Identity = 74/150 (49.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV E+ T G+ +ESK+KS+MASKS+D+SDD D DTE+ +IEDL
Sbjct: 401 MNHKRVFEVATKGETADESKIKSQMASKSIDTSDDANDYDTEEENRQVLEIKVKIEDLTI 460
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
E+++KVG+ KD +C T TKVKDGTSC LAIG++ NVV
Sbjct: 461 EKQDKVGEENKD-------------------VCASTGTLTKVKDGTSCRLAIGTKDNVVD 520
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSVLI 143
AGTIFDYDM+GDN++VS+D+V +G+C V +
Sbjct: 521 AGTIFDYDMDGDNMKVSVDMVANGNCFVSV 531
BLAST of PI0001890 vs. ExPASy TrEMBL
Match:
A0A5A7UDL2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1371G00050 PE=4 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDT--EDGKEIEDLAEEEENKV 60
M HKRV E+ T G + +ESK+KS+ ASKS+D+SDD D DT E+ + +EDL E+++KV
Sbjct: 70 MKHKRVPEVATKG-ETDESKIKSQTASKSIDTSDDANDHDTKEENRQVLEDLTIEKQDKV 129
Query: 61 GDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVGAGTIFD 120
GD K +C ET TKVKDGTSC LAIG++ NVVGAGTIFD
Sbjct: 130 GDENK-------------------YVCASVETLTKVKDGTSCRLAIGTKDNVVGAGTIFD 189
Query: 121 YDMEGDNVRVSMDVVVDGDCSVLI 143
YDM+GDNV+VS+D+V DG SV+I
Sbjct: 190 YDMDGDNVKVSVDMVTDGKVSVVI 193
BLAST of PI0001890 vs. ExPASy TrEMBL
Match:
A0A5A7TBV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001250 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDT--EDGKEIEDLAEEEENKV 60
M HKRV E+ T G + +ESK+KS+MASKS+D+SDD D D E+ + +EDL E+++KV
Sbjct: 274 MKHKRVPEVATKG-ETDESKIKSQMASKSIDTSDDANDHDAKEENRQVLEDLTIEKKDKV 333
Query: 61 GDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVGAGTIFD 120
G+ K +C ET TKVKDGTSC LAIG++ NVVGAGTIFD
Sbjct: 334 GEENK-------------------YVCASIETLTKVKDGTSCRLAIGTKDNVVGAGTIFD 393
Query: 121 YDMEGDNVRVSMDVVVDGDCSV 141
YDM+GDNV+VS+D+V DG+C V
Sbjct: 394 YDMDGDNVKVSVDMVTDGNCFV 395
BLAST of PI0001890 vs. ExPASy TrEMBL
Match:
A0A5D3BYX1 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00890 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 7.9e-23
Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV E+ T G+ +ESK+KS+MASKS+D+SDD DTE+ +IEDL
Sbjct: 402 MNHKRVSEVATKGETADESKIKSQMASKSIDTSDDANGYDTEEENRQVLETKVKIEDLTI 461
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
++++KVG+ KD +C T TKVKDGTSC LAIG++ NVV
Sbjct: 462 DKQDKVGEENKD-------------------VCASTGTLTKVKDGTSCRLAIGTKDNVVD 521
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSVLI 143
AGTIFDYDM+GDN+++S+D+V +G+C V +
Sbjct: 522 AGTIFDYDMDGDNMKISVDMVANGNCFVSV 532
BLAST of PI0001890 vs. NCBI nr
Match:
XP_016899542.1 (PREDICTED: uncharacterized protein LOC103486165 [Cucumis melo])
HSP 1 Score: 122.5 bits (306), Expect = 3.0e-24
Identity = 75/148 (50.68%), Postives = 99/148 (66.89%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV ++ T G+ +ESK+KS+MASKS+D+S+D D DTE+ EIEDL
Sbjct: 1 MNHKRVPKVATKGETTDESKIKSQMASKSIDTSNDANDHDTEEENIQVLEEEVEIEDLTI 60
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
E+++KVGD KD +C TSTKVKDGTS LAIG++ NVVG
Sbjct: 61 EKQDKVGDENKD-------------------VCVSTGTSTKVKDGTSYRLAIGTKDNVVG 120
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSV 141
AGTIFDYD++GDN++VS+D+VVDG+C +
Sbjct: 121 AGTIFDYDIDGDNMKVSVDMVVDGNCFI 129
BLAST of PI0001890 vs. NCBI nr
Match:
KAA0062144.1 (uncharacterized protein E6C27_scaffold89G005130 [Cucumis melo var. makuwa])
HSP 1 Score: 119.8 bits (299), Expect = 1.9e-23
Identity = 74/150 (49.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV E+ T G+ +ESK+KS+MASKS+D+SDD D DTE+ +IEDL
Sbjct: 401 MNHKRVFEVATKGETADESKIKSQMASKSIDTSDDANDYDTEEENRQVLEIKVKIEDLTI 460
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
E+++KVG+ KD +C T TKVKDGTSC LAIG++ NVV
Sbjct: 461 EKQDKVGEENKD-------------------VCASTGTLTKVKDGTSCRLAIGTKDNVVD 520
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSVLI 143
AGTIFDYDM+GDN++VS+D+V +G+C V +
Sbjct: 521 AGTIFDYDMDGDNMKVSVDMVANGNCFVSV 531
BLAST of PI0001890 vs. NCBI nr
Match:
KAA0054083.1 (uncharacterized protein E6C27_scaffold1371G00050 [Cucumis melo var. makuwa])
HSP 1 Score: 119.4 bits (298), Expect = 2.5e-23
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDT--EDGKEIEDLAEEEENKV 60
M HKRV E+ T G + +ESK+KS+ ASKS+D+SDD D DT E+ + +EDL E+++KV
Sbjct: 70 MKHKRVPEVATKG-ETDESKIKSQTASKSIDTSDDANDHDTKEENRQVLEDLTIEKQDKV 129
Query: 61 GDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVGAGTIFD 120
GD K +C ET TKVKDGTSC LAIG++ NVVGAGTIFD
Sbjct: 130 GDENK-------------------YVCASVETLTKVKDGTSCRLAIGTKDNVVGAGTIFD 189
Query: 121 YDMEGDNVRVSMDVVVDGDCSVLI 143
YDM+GDNV+VS+D+V DG SV+I
Sbjct: 190 YDMDGDNVKVSVDMVTDGKVSVVI 193
BLAST of PI0001890 vs. NCBI nr
Match:
KAA0040934.1 (uncharacterized protein E6C27_scaffold125G001250 [Cucumis melo var. makuwa])
HSP 1 Score: 117.9 bits (294), Expect = 7.3e-23
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDT--EDGKEIEDLAEEEENKV 60
M HKRV E+ T G + +ESK+KS+MASKS+D+SDD D D E+ + +EDL E+++KV
Sbjct: 274 MKHKRVPEVATKG-ETDESKIKSQMASKSIDTSDDANDHDAKEENRQVLEDLTIEKKDKV 333
Query: 61 GDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVGAGTIFD 120
G+ K +C ET TKVKDGTSC LAIG++ NVVGAGTIFD
Sbjct: 334 GEENK-------------------YVCASIETLTKVKDGTSCRLAIGTKDNVVGAGTIFD 393
Query: 121 YDMEGDNVRVSMDVVVDGDCSV 141
YDM+GDNV+VS+D+V DG+C V
Sbjct: 394 YDMDGDNVKVSVDMVTDGNCFV 395
BLAST of PI0001890 vs. NCBI nr
Match:
TYK04891.1 (uncharacterized protein E5676_scaffold143G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22
Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = 0
Query: 1 MNHKRVQEMPTIGDDINESKVKSEMASKSMDSSDDGRDEDTEDGK--------EIEDLAE 60
MNHKRV E+ T G+ +ESK+KS+MASKS+D+SDD DTE+ +IEDL
Sbjct: 402 MNHKRVSEVATKGETADESKIKSQMASKSIDTSDDANGYDTEEENRQVLETKVKIEDLTI 461
Query: 61 EEENKVGDGRKDGSVSARTSTQETDEKKGEGLCELAETSTKVKDGTSCLLAIGSRANVVG 120
++++KVG+ KD +C T TKVKDGTSC LAIG++ NVV
Sbjct: 462 DKQDKVGEENKD-------------------VCASTGTLTKVKDGTSCRLAIGTKDNVVD 521
Query: 121 AGTIFDYDMEGDNVRVSMDVVVDGDCSVLI 143
AGTIFDYDM+GDN+++S+D+V +G+C V +
Sbjct: 522 AGTIFDYDMDGDNMKISVDMVANGNCFVSV 532
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4DU79 | 1.4e-24 | 50.68 | uncharacterized protein LOC103486165 OS=Cucumis melo OX=3656 GN=LOC103486165 PE=... | [more] |
| A0A5A7V4B5 | 9.3e-24 | 49.33 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5A7UDL2 | 1.2e-23 | 52.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7TBV0 | 3.6e-23 | 52.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BYX1 | 7.9e-23 | 47.33 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_016899542.1 | 3.0e-24 | 50.68 | PREDICTED: uncharacterized protein LOC103486165 [Cucumis melo] | [more] |
| KAA0062144.1 | 1.9e-23 | 49.33 | uncharacterized protein E6C27_scaffold89G005130 [Cucumis melo var. makuwa] | [more] |
| KAA0054083.1 | 2.5e-23 | 52.78 | uncharacterized protein E6C27_scaffold1371G00050 [Cucumis melo var. makuwa] | [more] |
| KAA0040934.1 | 7.3e-23 | 52.11 | uncharacterized protein E6C27_scaffold125G001250 [Cucumis melo var. makuwa] | [more] |
| TYK04891.1 | 1.6e-22 | 47.33 | uncharacterized protein E5676_scaffold143G00890 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
