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PI0001813 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAATCACTTGAGTCCAAACGGACAATTAGCCCATCCAAGTAAGTTTTTGTGTTGTTGTAGTTACATTTTTATAGTCGTTTCATATTAGCCTCGAGTTTGGCTTAGTGACTTGGTGCTGTCTAGTGCAGGCTTGTGGCGACTGGCGAGCGTGGTTCTAAAGATAAGGTTTGCATTCGCTCCTTCTCCCTCTCTTTCACTACTTCATATCCATTTCCTTTCTCAATTTCTTGTCTTCCCTTCAGAATCCCCATTGCAGCCATGACTTTAAACCTAGTTGCTTCATTCAGAGGTCTCTCTCTCGTCTCTTCTTCCTCTTTCTTCAAAGGCGATTTCGGCTCTATTCATACCCCTCCTAAGCTCTCCCTCTCCTTCCCAAACACATTTCCTTTAACCATTGAAAACGCCCACAAGAAAGGAGCTGGTAGCACCAAGAACGGTCGTGATTCCAAGGGCCAGAGGCTCGGCGTTAAAATCTTCGGCGATCAAGTTGCCAAACCTGGTTCCATTATTGTTCGTCAGCGTGGAACTAAGGTAATTTCTCACTTCAATTTCCTATATTACATCGACTTCAATTCTCTACACCTTCCCCCCATTCTTTAGGGCATTCTTCAGCATACATCCAAACTTTTTTTTTCCTTTTTTTTGTAATTAACCCTCTCATGCCTCCATTATGAATCATTGCCATTAGCAAAACTATTCTCTTTTGCCCGTGACGTAGTTAGCACATTGTTGTTGAACTACATAAATATGTCTTGATTCAATATGGTTTTTTATATTGTTACTGAATCACCTAGATCATATAGAGTCAAATTCCTTTCTGGTTCCCCCATTGTTTAGGGCACGCTTGAGCATACATCTTGTTCTGAATCATTCTCGTTCTCTCTGCCCGTGACTTAGCTAACACATAGTTGGTGAATTACTTAAATCTAAGTTGATTCCGTATTGTTTTATACACTGTTAGTAAATCACCTAAATTACGTCGAGTTGAAGTTCGTACATGTTCCTCCCATTGTTTAGTGCATTCTGGAGCATACGTCGAAGCTTCTTTGAAATTGAGTCATGATTCTGTTATCTGGGTTCGTGCTATTTACGTTATTAATCTAGAGAAGTGCACCTCCCTTCTGTGTTCAGAATTATTCAAAAAGTTCTTCCTCTACCTTGTAGAGGTAGCTAACATTGTTAGTGTATTGTTTTACTTTTTTAAAAAAAAATTTCGATTCTATAACAGTTTCTGTTTCTGTACCAATCATTTCAGTTTCATGCCGGAAAGAATGTAGGGCTTGGCAAGGACCATACAATTTTCTCATTGATTGATGGACTTGTAAAGTTCGAGAAGTATGGACCCGACAAGAAGAAGGTTTTCACCTCGAATCTGAATCTTTCAATACGAACCATTCTTACAAAACTGAGATATTTATTTACTTCATTACATTGTAGGTGAGTGTTTACCCAAGAGAAGTGCAGCCTGAGAATCCAAACAGCTATAGAGCAAGGAAGAGGGAGTATTTCAGGCTGCAAAGAGAGCGCAAGAAAGCAAGAAAGGAAGGCATTATTGCTCAACCCCAATTACTATTAGCTTCCACTGATGATGTTGAAACCAATCCAGTTTGCTGATTCCACTTCAATCACTGCTTGTTTTAAAGCCCTGATGATCTTGAAGATTGAAGGTCTGCTTCTTTAGCTTCTCCTTTTTTTCTTTTTTGTTTATGCACATATAATTTGTCAGATTCTTCACAGGAATGTGTTTCATTATTATTCTCAATTAGCAATGTTCTACTTTTTGCCCCTACGTTTTCTCTATGTTCATTTCACTGCTGATTACTTTTTGTTGATTTTGGTGTCAAAATGGGTATTTACCAGAACAGATAATATGGGGGTGAGTTTTAATTTATTTTGTGGTAAAATGACTAGCCAAGAAATTAAATGAGTTCGGTGGCTCTGTCCTGAAATTTGATATGAATCGTGTAGCATTGCCATGAGTTTACTGTTGAAATGACACCAAAATTAGGGATTGTGATGTCCTTGTTGCTAGATAGAATAGCATATAACATAAGAAAGTTTAGTTAAAATTTAATTGAAACTTTTTTTATTACATATGATTTTTAAATCTGAAGAGGTAGGTGGCATTAGTGGTAAAAGAACCACTTTTTTTAATACTTATGAGTGCGTTTTATGTACACCTTTTCTTGCTGGAGTGACATAACAAGTTATATAAAATTGTGCAGTTTGGTAGATATGGTACCGGATTATATAAAAGATATGTATGGTAGGATACATTTGAGCGATACATATGTTGTGTACCATATCTCCTACAAATCCTCATCAATAACTCATGAATCCTTCTAAGATCATGGTTACCTATGTTTGACGTAAACCATCCGTGGAAATGTAAAAGAATGAATCCCAATTGATTTGGTTTGTTGTTTACCTGTATTTTGTAATAGTCATGTGTTGAGGAACTCACCTCCTATTCTGTAATCAAATTGCTCAATTTAATTGAGGAACAATTGGTGTTTATTCTAATTGCGTTTGAAAATTACATGGGAATTAATAGCTTTACTGTTACTGTTATAGATGTTACTATAATCGTATGAAAATTATGAATATGTCACATTTATTATTTATCTTTACCTTTATTGTCATTATTGCTATT TTTAAATCACTTGAGTCCAAACGGACAATTAGCCCATCCAAGTAAGTTTTTGTGTTGTTGTAGTTACATTTTTATAGTCGTTTCATATTAGCCTCGAGTTTGGCTTAGTGACTTGGTGCTGTCTAGTGCAGGCTTGTGGCGACTGGCGAGCGTGGTTCTAAAGATAAGGTTTGCATTCGCTCCTTCTCCCTCTCTTTCACTACTTCATATCCATTTCCTTTCTCAATTTCTTGTCTTCCCTTCAGAATCCCCATTGCAGCCATGACTTTAAACCTAGTTGCTTCATTCAGAGGTCTCTCTCTCGTCTCTTCTTCCTCTTTCTTCAAAGGCGATTTCGGCTCTATTCATACCCCTCCTAAGCTCTCCCTCTCCTTCCCAAACACATTTCCTTTAACCATTGAAAACGCCCACAAGAAAGGAGCTGGTAGCACCAAGAACGGTCGTGATTCCAAGGGCCAGAGGCTCGGCGTTAAAATCTTCGGCGATCAAGTTGCCAAACCTGGTTCCATTATTGTTCGTCAGCGTGGAACTAAGTTTCATGCCGGAAAGAATGTAGGGCTTGGCAAGGACCATACAATTTTCTCATTGATTGATGGACTTGTAAAGTTCGAGAAGTATGGACCCGACAAGAAGAAGGTGAGTGTTTACCCAAGAGAAGTGCAGCCTGAGAATCCAAACAGCTATAGAGCAAGGAAGAGGGAGTATTTCAGGCTGCAAAGAGAGCGCAAGAAAGCAAGAAAGGAAGGCATTATTGCTCAACCCCAATTACTATTAGCTTCCACTGATGATGTTGAAACCAATCCAGTTTGCTGATTCCACTTCAATCACTGCTTGTTTTAAAGCCCTGATGATCTTGAAGATTGAAGGTCTGCTTCTTTAGCTTCTCCTTTTTTTCTTTTTTGTTTATGCACATATAATTTGTCAGATTCTTCACAGGAATGTGTTTCATTATTATTCTCAATTAGCAATGTTCTACTTTTTGCCCCTACGTTTTCTCTATGTTCATTTCACTGCTGATTACTTTTTGTTGATTTTGGTGTCAAAATGGGTATTTACCAGAACAGATAATATGGGGGTGAGTTTTAATTTATTTTGTGGTAAAATGACTAGCCAAGAAATTAAATGAGTTCGGTGGCTCTGTCCTGAAATTTGATATGAATCGTGTAGCATTGCCATGAGTTTACTGTTGAAATGACACCAAAATTAGGGATTGTGATGTCCTTGTTGCTAGATAGAATAGCATATAACATAAGAAAGTTTAGTTAAAATTTAATTGAAACTTTTTTTATTACATATGATTTTTAAATCTGAAGAGGTAGGTGGCATTAGTGGTAAAAGAACCACTTTTTTTAATACTTATGAGTGCGTTTTATGTACACCTTTTCTTGCTGGAGTGACATAACAAGTTATATAAAATTGTGCAGTTTGGTAGATATGGTACCGGATTATATAAAAGATATGTATGGTAGGATACATTTGAGCGATACATATGTTGTGTACCATATCTCCTACAAATCCTCATCAATAACTCATGAATCCTTCTAAGATCATGGTTACCTATGTTTGACGTAAACCATCCGTGGAAATGTAAAAGAATGAATCCCAATTGATTTGGTTTGTTGTTTACCTGTATTTTGTAATAGTCATGTGTTGAGGAACTCACCTCCTATTCTGTAATCAAATTGCTCAATTTAATTGAGGAACAATTGGTGTTTATTCTAATTGCGTTTGAAAATTACATGGGAATTAATAGCTTTACTGTTACTGTTATAGATGTTACTATAATCGTATGAAAATTATGAATATGTCACATTTATTATTTATCTTTACCTTTATTGTCATTATTGCTATT ATGACTTTAAACCTAGTTGCTTCATTCAGAGGTCTCTCTCTCGTCTCTTCTTCCTCTTTCTTCAAAGGCGATTTCGGCTCTATTCATACCCCTCCTAAGCTCTCCCTCTCCTTCCCAAACACATTTCCTTTAACCATTGAAAACGCCCACAAGAAAGGAGCTGGTAGCACCAAGAACGGTCGTGATTCCAAGGGCCAGAGGCTCGGCGTTAAAATCTTCGGCGATCAAGTTGCCAAACCTGGTTCCATTATTGTTCGTCAGCGTGGAACTAAGTTTCATGCCGGAAAGAATGTAGGGCTTGGCAAGGACCATACAATTTTCTCATTGATTGATGGACTTGTAAAGTTCGAGAAGTATGGACCCGACAAGAAGAAGGTGAGTGTTTACCCAAGAGAAGTGCAGCCTGAGAATCCAAACAGCTATAGAGCAAGGAAGAGGGAGTATTTCAGGCTGCAAAGAGAGCGCAAGAAAGCAAGAAAGGAAGGCATTATTGCTCAACCCCAATTACTATTAGCTTCCACTGATGATGTTGAAACCAATCCAGTTTGCTGA MTLNLVASFRGLSLVSSSSFFKGDFGSIHTPPKLSLSFPNTFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKARKEGIIAQPQLLLASTDDVETNPVC Homology
BLAST of PI0001813 vs. ExPASy Swiss-Prot
Match: P82190 (50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL27 PE=1 SV=2) HSP 1 Score: 276.9 bits (707), Expect = 1.6e-73 Identity = 146/189 (77.25%), Postives = 165/189 (87.30%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy Swiss-Prot
Match: P30155 (50S ribosomal protein L27, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL27 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.2e-70 Identity = 135/167 (80.84%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy Swiss-Prot
Match: Q9FLN4 (50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL27 PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.9e-67 Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy Swiss-Prot
Match: O65037 (50S ribosomal protein L27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL27 PE=2 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 7.0e-61 Identity = 124/192 (64.58%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy Swiss-Prot
Match: A6Q4D3 (50S ribosomal protein L27 OS=Nitratiruptor sp. (strain SB155-2) OX=387092 GN=rpmA PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.4e-29 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy TrEMBL
Match: A0A1S3B381 (50S ribosomal protein L27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485482 PE=3 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy TrEMBL
Match: A0A0A0LQ66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406670 PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93 Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy TrEMBL
Match: A0A6J1K388 (50S ribosomal protein L27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489672 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87 Identity = 168/185 (90.81%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy TrEMBL
Match: A0A6J1FG23 (50S ribosomal protein L27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445091 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87 Identity = 168/185 (90.81%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of PI0001813 vs. ExPASy TrEMBL
Match: A0A6J1BXH1 (50S ribosomal protein L27, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006224 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of PI0001813 vs. NCBI nr
Match: XP_008441337.1 (PREDICTED: 50S ribosomal protein L27, chloroplastic [Cucumis melo]) HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of PI0001813 vs. NCBI nr
Match: XP_004138618.1 (50S ribosomal protein L27, chloroplastic [Cucumis sativus] >XP_011649960.1 50S ribosomal protein L27, chloroplastic [Cucumis sativus] >KGN63169.1 hypothetical protein Csa_022133 [Cucumis sativus]) HSP 1 Score: 350.9 bits (899), Expect = 6.6e-93 Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of PI0001813 vs. NCBI nr
Match: XP_038884234.1 (50S ribosomal protein L27, chloroplastic [Benincasa hispida]) HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91 Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of PI0001813 vs. NCBI nr
Match: XP_023550670.1 (50S ribosomal protein L27, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023550671.1 50S ribosomal protein L27, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6578368.1 50S ribosomal protein L27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87 Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of PI0001813 vs. NCBI nr
Match: KAG7015950.1 (50S ribosomal protein L27, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87 Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of PI0001813 vs. TAIR 10
Match: AT5G40950.1 (ribosomal protein large subunit 27 ) HSP 1 Score: 256.1 bits (653), Expect = 2.1e-68 Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of PI0001813 vs. TAIR 10
Match: AT2G16930.2 (Ribosomal protein L27 family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of PI0001813 vs. TAIR 10
Match: AT2G16930.1 (Ribosomal protein L27 family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of PI0001813 vs. TAIR 10
Match: AT2G16930.3 (Ribosomal protein L27 family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of PI0001813 vs. TAIR 10
Match: AT5G15220.1 (Ribosomal protein L27 family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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