PI0001759 (gene) Melon (PI 482460) v1

Overview


Name	PI0001759
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Location	chr02: 24162823 .. 24163326 (-)
RNA-Seq Expression	PI0001759
Synteny	PI0001759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTCTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCAACAGCCCGGTGCGGTTGTTTCCGGCTATCGTGTTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGGCGCGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA

mRNA sequence

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTCTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCAACAGCCCGGTGCGGTTGTTTCCGGCTATCGTGTTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGGCGCGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA

Coding sequence (CDS)

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTCTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCAACAGCCCGGTGCGGTTGTTTCCGGCTATCGTGTTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGGCGCGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA

Protein sequence

MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

Homology

[Close]

BLAST of PI0001759 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89
Identity = 163/175 (93.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR--------SGGGGGSGVRAGKFQY 120
           RWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR        SGGGGGSGVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of PI0001759 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGSGVRAGKFQYDP 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           LSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of PI0001759 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGSGVRAGKFQYDP 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           LSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of PI0001759 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.1e-87
Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-------GGGGGSGVRAGKFQY 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS       GGGGGSGVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           DPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of PI0001759 vs. ExPASy TrEMBL
Match: A0A6J1JH52 (uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.7e-75
Identity = 142/172 (82.56%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MA+ D  EE P  EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EG
Sbjct: 1   MAYPDA-EEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEG 60

Query: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGV---RAGKFQYDPLSY 120
           RWWARGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+GGGGG G    R GKFQYDPLSY
Sbjct: 61  RWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSY 120

Query: 121 AMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 168
           AMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 AMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of PI0001759 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 1.5e-88
Identity = 163/175 (93.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR--------SGGGGGSGVRAGKFQY 120
           RWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR        SGGGGGSGVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of PI0001759 vs. NCBI nr
Match: XP_008453108.1 (PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.0e-87
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGSGVRAGKFQYDP 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           LSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of PI0001759 vs. NCBI nr
Match: KAA0057881.1 (putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 8.5e-87
Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-------GGGGGSGVRAGKFQY 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS       GGGGGSGVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 168
           DPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of PI0001759 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86
Identity = 162/169 (95.86%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVH+EG
Sbjct: 1   MAFTDVEEESP-CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEG 60

Query: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMN 120
           RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGG GVRAGKFQYDPLSYAMN
Sbjct: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGG-GVRAGKFQYDPLSYAMN 120

Query: 121 FDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 168
           FDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT  KDVS+VA
Sbjct: 121 FDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTIIKDVSSVA 167

[Close]

BLAST of PI0001759 vs. NCBI nr
Match: XP_022988416.1 (uncharacterized protein LOC111485666 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 9.7e-75
Identity = 142/172 (82.56%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MA+ D  EE P  EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EG
Sbjct: 1   MAYPDA-EEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEG 60

Query: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGV---RAGKFQYDPLSY 120
           RWWARGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+GGGGG G    R GKFQYDPLSY
Sbjct: 61  RWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSY 120

Query: 121 AMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 168
           AMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 AMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of PI0001759 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 8.9e-26
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 8   EESPSCEADKSNSL---LPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRW 67
           +  P  E D ++ +   L   R  CF + C  S + +T G S WW+RI    ++  + RW
Sbjct: 4   QSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERW 63

Query: 68  WARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGV----------------- 127
           W RG R   ++REWSE+VAGPRWKT+IRRF R+   GGGG  V                 
Sbjct: 64  WIRGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSS 123

Query: 128 RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT 158
             GKF+YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Sbjct: 124 DQGKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of PI0001759 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 42  TVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGG 101
           TV  SWW+RI  +  H E RWW   VR  LK+REWSEIVAGPRWKTFIRRFNR+   G  
Sbjct: 19  TVKSSWWQRIHRNN-HQEPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 78

Query: 102 GSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIP 153
                + KF+YDP+SY ++F++  +     DDD     G R+FS RYAS+P
Sbjct: 79  WDD--SDKFRYDPVSYTLSFEDEDKD----DDDEAGVGGVRSFSMRYASVP 119

[Close]

BLAST of PI0001759 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 62/148 (41.89%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 16  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWARGVRVLLKL 75
           D+ +  +   R  CF L C GS + +   G  WW+RIR   ++  + RWW  G    +K+
Sbjct: 598 DEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSG---WMKM 657

Query: 76  REWSEIVAGPRWKTFIRRFNRNR--SGG--GGGSGVRAGKFQYDPLSYAMNFDEGSRQIG 135
           REWSEIVAGP+WKTFIRRF RN   +GG  GG +      F+YD  SY++NFD+G +Q G
Sbjct: 658 REWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDG-KQTG 717

Query: 136 ELDDDIDDFNGYRNFSARYASIPAPLKT 158
             +D+      YR++S R+A+   P+ T
Sbjct: 718 HFEDEFP----YRDYSMRFAAPSLPVST 737

[Close]

BLAST of PI0001759 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 67/137 (48.91%), Postives = 80/137 (58.39%), Query Frame = 0


Query: 26  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWARGVRVLLKLREWSE 85
           RC CF  S   SR    VG S W RIR     N       E RWW   +R  LK+REWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 86  IVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDF 145
           IVAGPRWKTFIRRFNR+   G       + KFQYDPLSY++NFD+        DD+ D++
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWDA--SEKFQYDPLSYSLNFDD--------DDEEDEY 138

Query: 146 ---NGYRNFSARYASIP 153
               G R+FS R+AS+P
Sbjct: 139 VGLGGLRSFSTRFASVP 141

[Close]

BLAST of PI0001759 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 6.0e-06
Identity = 28/70 (40.00%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 55  QVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDP 114
           Q    G W   G   L  L+E SE +AGP+WK FIR F+  R         R   F YD 
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRK-----KMRRDVDFTYDL 110

Query: 115 LSYAMNFDEG 125
            +Y++NFD+G
Sbjct: 111 KNYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of PI0001759 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUB2	7.5e-89	93.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A5D3BK38	2.4e-87	93.06	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BVG0	2.4e-87	93.06	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]
A0A5A7UWM1	4.1e-87	92.00	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A6J1JH52	4.7e-75	82.56	uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666...	[more]

BLAST of PI0001759 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657987.1	1.5e-88	93.14	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
XP_008453108.1	5.0e-87	93.06	PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putat...	[more]
KAA0057881.1	8.5e-87	92.00	putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]	[more]
XP_038878924.1	2.5e-86	95.86	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
XP_022988416.1	9.7e-75	82.56	uncharacterized protein LOC111485666 [Cucurbita maxima]	[more]

BLAST of PI0001759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01430.1	8.9e-26	39.53	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	1.7e-24	52.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G14890.1	1.1e-23	41.89	NHL domain-containing protein	[more]
AT5G62865.1	1.1e-23	48.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	6.0e-06	40.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 3..164
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 3..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001759.1	PI0001759.1	mRNA