PI0001753 (gene) Melon (PI 482460) v1

Overview
NamePI0001753
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 20309047 .. 20309410 (-)
RNA-Seq ExpressionPI0001753
SyntenyPI0001753
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTGCTTCCTCAAAACGTGTTTCTTTTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTTCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGTATTGGGTGTTTGATTCTACTCTCTGATAGTCTGATTGTGGTATTGATTTCTTGTTTTGAGCTTTTTTCGTTTCATGGGTTGCTGTAATTTCTGAAGTTGAAAATGGGTTTTTATTGCAGGCAGGAGGAAAGGAGGAATGATTTGAAATTTGGAGTTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

mRNA sequence

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTGCTTCCTCAAAACGTGTTTCTTTTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTTCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAATGATTTGAAATTTGGAGTTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

Coding sequence (CDS)

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTGCTTCCTCAAAACGTGTTTCTTTTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTTCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAATGATTTGAAATTTGGAGTTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

Protein sequence

MLLSLLIFHFSFYAASSKRVSFSSFVLIWFSSFSFPSGFCLLIRLVGVGSSRLRQEERRNDLKFGVQKLNKGCSGKYQID
Homology
[Close]
BLAST of PI0001753 vs. ExPASy TrEMBL
Match: A0A0A0KDY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.3e-29
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYAASSKRVSFSSFVLIWFSSFSFPSGFCLLIRLVGVGSSRLRQEE-RR 60
          MLLSLLIFHFSFYA+SSKRVS SSFVLIWFSSF FPSGFCLLIRLVGVGSSRLRQEE RR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NDLKFGVQKLNKGCSGKYQID 81
          N+L FG+QKL+K CSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

[Close]
BLAST of PI0001753 vs. NCBI nr
Match: KGN47920.1 (hypothetical protein Csa_004333 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYAASSKRVSFSSFVLIWFSSFSFPSGFCLLIRLVGVGSSRLRQEE-RR 60
          MLLSLLIFHFSFYA+SSKRVS SSFVLIWFSSF FPSGFCLLIRLVGVGSSRLRQEE RR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NDLKFGVQKLNKGCSGKYQID 81
          N+L FG+QKL+K CSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

The following BLAST results are available for this feature:
BLAST of PI0001753 vs.
Match NameE-valueIdentityDescription
BLAST of PI0001753 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY79.3e-2988.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1[more]
BLAST of PI0001753 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47920.11.9e-2888.89hypothetical protein Csa_004333 [Cucumis sativus][more]
BLAST of PI0001753 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001753.1PI0001753.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane