PI0001746 (gene) Melon (PI 482460) v1

Overview


Name	PI0001746
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Thioredoxin domain-containing protein
Location	chr03: 1359375 .. 1361870 (-)
RNA-Seq Expression	PI0001746
Synteny	PI0001746

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAATCAAATGTAAAGTGTAAGAAAAAACTTTTTATTTCAAGATTACAATGGAAGAATGTATTTGAAATAATTGTAAGCCTGAATGTATTCTTTTTTCAGCTCCCAGAAAGGTAAATACAGTCCTACCTCATCTAAAAACCAAAGTTCTATCAATTGAGATAATAGAGGCAATAGCTCATCTTTAAAAAATATTACTTTTGACCTGGTCTCAAAACTAACTTAAAAGAAAAAAAATAGTAAGAGTTTTGGATGAAAATTAGGCCATAGTGGAGTGTGGTGGCAATGTTCGGATAACAATTTTCGTTCTAGGTCACCGCCATACTGTTTTCTATCTCAGTTTTCATCTAAAATATTTTAACAGCTTTCTACTTCAATGTTAGTTAAGAAACGGTCTACTATAAGTCTGAGATAATAATCCTCGAAAAGAGTATTTTCGAAAAAATCTTTGTTACTAATTAAAAATTTAAAAGAAAAATTGCCATCCATTCAATGTTGGGCTTCCAAATCTGGGCTTTTTCAAATAGAAACTCATCGAACAAGCCATGTCAACACAACAACCCACGTGAAAGAAAATCAATGGCAAAGGAAGGAAGAAGATAATGATGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGGTAATCCACTGGTCCTTCATTTGTTGCTTTACCCCTTAAATTCTTACACCTTTCATTCTCTTAACAGTTACTTTTCATCCTCTTTCTGAATCGATAATTGAAATTTTCTCCTCCTTTAACACGATTAATGTTAAATAAGATTTATGAGTTTGAAACATTGTCTTGAATGCTACATCTGAATCTGATATATTGCTCAGTTTTATTAGAGCTTTCTGACTGAAGTTCATTCACTAAAAACTCCCAAATCGGAGTTTTGGGTATATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTAATCAGTTTTGGATTAAACCCAAATGAGAAACTGGGGTCGGGAATCCCCATTTCGATTCCTCGCTGGCTTTCATCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCGGAAGTTCCAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGTGTGATGAGGATGATGATCTTTGCCCTGTAGATTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTTTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGATTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTGAGTGTTTCATATTAGCCATGTTATCTTGGGAAAATGACTTCCATTCCAATCACTGAATGGTTATTATGCTTTGAATTTGATTGTGTATTTTAGGTGATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGGTAAGCTTGTTTTCTCTTCTTGGTTGCCATGTTGGGTTCGCGTTGAATTGGACTGAAGTTTTGAGAAACTGTTTTTGGTCTCTTCCGAAACTTTTTCTGTTGCTTCCTCATTAAATTTTCTTATTCTAATTATTGTAAGTTAGAAGGTCCAATTTTAATATATTCTTAAAGTAAGGAACTAAATTGTTAATCCTTGGGAGTGTAATTGGAACTACCACCCTACCTTTCTAAAATTTTTAATGATTTCGGTTATTTTTAAAATAATAATAATATTATTATTATATTTTTGCTGCATCAAACAACATAACTAATATAAATTTATTGTTGTTTCAAACCTCCTCAAGAAAGTATTTAAGAACTAAATTTATAAGAAAATGTTATAAATGAATAACCGGCTCCTCAACTTTTAATTTTGTGGTTTTCTAAAAAAAAATATTCAATTTTGTGTCTGTAAATTTATAAAGTTAGAAAATTTTCTAATCAATTAATGACCAGTTAGACCCAAAATTCGAAGTTTATAAGCATATTATATATTTTAAAAGTTTAATGACGTATTAGACACAAAATTCAAAGTACATGAATCTATTAGATACATTTTTATAATTTAGAGATAGAAAACCATTAAAGTTTAAGGGCTTAATTTGTAATATGTGTGAATATTTGTTCGTTTAACAATTTTGTGTCTAAAATGTTTGTGATTGTGTTAATTAAGTTCCTAAATGTAAATTAGGTTCATATTTGTGTTAATTAAGTTTCTAAAATGTTCATGTTTATGATAAACAAGTTTTGTTTTTGCATTTTAGTTCACTAATGTTGAAATTTGATGATGGCATTGCAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACCAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAA

mRNA sequence

ATGTACAATCAAATTTTTGGATTAAACCCAAATGAGAAACTGGGGTCGGGAATCCCCATTTCGATTCCTCGCTGGCTTTCATCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCGGAAGTTCCAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGTGTGATGAGGATGATGATCTTTGCCCTGTAGATTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTTTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGATTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTGATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACCAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAA

Coding sequence (CDS)

ATGTACAATCAAATTTTTGGATTAAACCCAAATGAGAAACTGGGGTCGGGAATCCCCATTTCGATTCCTCGCTGGCTTTCATCGGAGAAAGAACCCGTTCGATTGTCGATTACAAGACCGGAAGTTCCAAGACACCAATTGTTGTACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGTGTGATGAGGATGATGATCTTTGCCCTGTAGATTGTGTGCGGGAATTCAAGACGGACGAAGAGTTCATTAAAATTTTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGATTTTTATCGAACATCTTGTGGGAGCTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTGATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACCAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAA

Protein sequence

MYNQIFGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI

Homology

[Close]

BLAST of PI0001746 vs. ExPASy Swiss-Prot
Match: Q9C5C5 (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.5e-57
Identity = 104/133 (78.20%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 59  NQGELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 118
           N  EL DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 119 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDK 178
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

Query: 179 ERILTAITKYSSS 192
           ERI  AI KY+SS
Sbjct: 190 ERIDAAILKYTSS 202

[Close]

BLAST of PI0001746 vs. ExPASy Swiss-Prot
Match: Q6YTI3 (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0567100 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.1e-51
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 65  DEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKG 124
           +E+++ CPV+CV EFKT+EE  ++L++AK  G LVVVDF+R SCGSCKYIEQGF KLCKG
Sbjct: 74  EEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLCKG 133

Query: 125 SGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTA 184
           SGD  + V+FLKHNV+DEYDEQSEVA+RLRIK VPLFHFYK+GVLLEAF TRDKERI+ A
Sbjct: 134 SGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERIIAA 193

Query: 185 ITKYS--SSP 193
           I KY+  SSP
Sbjct: 194 IQKYTAPSSP 203

[Close]

BLAST of PI0001746 vs. ExPASy Swiss-Prot
Match: P10639 (Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 6.0e-10
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 76  VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 135
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 136 KHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 190
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++  +IT+Y+
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEYA 105

[Close]

BLAST of PI0001746 vs. ExPASy Swiss-Prot
Match: P11232 (Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 76  VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 135
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 136 KHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 190
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++   IT+++
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATITEFA 105

[Close]

BLAST of PI0001746 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 83  EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 142
           +EF   + KAKE G +V++DF  + CG C++I   FA+  K    +    +FLK +V   
Sbjct: 15  DEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAK----KFPGAVFLKVDV--- 74

Query: 143 YDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKY 189
            DE  EVAE+  ++ +P F F KDG   +      K+ +   I K+
Sbjct: 75  -DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of PI0001746 vs. ExPASy TrEMBL
Match: A0A1S3BBI1 (thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.6e-101
Identity = 183/190 (96.32%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGL+PNEKL S IPI IPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGE+ D
Sbjct: 17  FGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGEMGD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. ExPASy TrEMBL
Match: A0A0A0LP39 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 9.9e-101
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGLNPNEK+   IPI IPRWLSSEKEPVRLSITRPEVPR+QLLYKSKMRVNAGNQGEL D
Sbjct: 17  FGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. ExPASy TrEMBL
Match: A0A5A7UYD0 (Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00350 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGL+PNEKL S IPI IPRWLSSEKEPVRLSITRPEV RHQLLYKSKMRVNAGNQGE+ D
Sbjct: 17  FGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLYKSKMRVNAGNQGEMGD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. ExPASy TrEMBL
Match: A0A6J1CRI9 (thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 7   GLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVP-----RHQLLYKSKMRVNAGNQG 66
           GLNPNE+L S IPISIP   S EK  VRLSI+RP++P     RHQ L++S++RV AG+QG
Sbjct: 62  GLNPNEELESRIPISIPS-RSFEKGHVRLSISRPQLPSSLNIRHQFLFESRIRVAAGSQG 121

Query: 67  ELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKL 126
            L DEDDDLCPVDCVREFKTDE+F+KILD+AKE G LVVVDFYRTSCGSCKYIEQGFAKL
Sbjct: 122 GLSDEDDDLCPVDCVREFKTDEDFLKILDRAKETGALVVVDFYRTSCGSCKYIEQGFAKL 181

Query: 127 CKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERI 186
           CKGSGD++ PVIFLKHNV+DEYDEQSEVAERLRI+TVPLFHFYKDGVLLEAFPTRDKERI
Sbjct: 182 CKGSGDEETPVIFLKHNVIDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDKERI 241

Query: 187 LTAITKYSSSPLQI 196
           L AI+KYSSS LQI
Sbjct: 242 LAAISKYSSSALQI 254

[Close]

BLAST of PI0001746 vs. ExPASy TrEMBL
Match: A0A6J1GH82 (thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.3e-80
Identity = 152/183 (83.06%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 18  IPISIPRWLSSEKEPVRLSITRPEVP-----RHQLLYKSKMRVNAGNQGELCDEDDDLCP 77
           IPISIP WL SE   VRLSITRPE P     RH+L++KSK RV AGNQG L DEDDDLCP
Sbjct: 63  IPISIPFWL-SENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQGGLSDEDDDLCP 122

Query: 78  VDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPV 137
           V+CVREFKTDEEFI+IL++AKE+G LVVVDFYRTSCGSCKYIEQGFAKLC+GSGDQ+APV
Sbjct: 123 VECVREFKTDEEFIRILERAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSGDQEAPV 182

Query: 138 IFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSP 196
           IFLKHNV+DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERIL AITKYSS+ 
Sbjct: 183 IFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAITKYSSTA 242

[Close]

BLAST of PI0001746 vs. NCBI nr
Match: XP_008444622.1 (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 183/190 (96.32%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGL+PNEKL S IPI IPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGE+ D
Sbjct: 17  FGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGEMGD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. NCBI nr
Match: XP_004150883.1 (thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_031736609.1 thioredoxin-like 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 2.1e-100
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGLNPNEK+   IPI IPRWLSSEKEPVRLSITRPEVPR+QLLYKSKMRVNAGNQGEL D
Sbjct: 17  FGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. NCBI nr
Match: KAA0060902.1 (thioredoxin-like 4 [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGL+PNEKL S IPI IPRWLSSEKEPVRLSITRPEV RHQLLYKSKMRVNAGNQGE+ D
Sbjct: 17  FGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLYKSKMRVNAGNQGEMGD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           TKYSSSPLQI
Sbjct: 197 TKYSSSPLQI 206

[Close]

BLAST of PI0001746 vs. NCBI nr
Match: KAE8652091.1 (hypothetical protein Csa_022233 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 18  IPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCDEDDDLCPVDCVR 77
           IPI IPRWLSSEKEPVRLSITRPEVPR+QLLYKSKMRVNAGNQGEL DEDDDLCPVDCVR
Sbjct: 5   IPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSDEDDDLCPVDCVR 64

Query: 78  EFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKH 137
           EFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKH
Sbjct: 65  EFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKH 124

Query: 138 NVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI 196
           NVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 125 NVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI 182

[Close]

BLAST of PI0001746 vs. NCBI nr
Match: XP_038886222.1 (thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886224.1 thioredoxin-like 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 172/190 (90.53%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 6   FGLNPNEKLGSGIPISIPRWLSSEKEPVRLSITRPEVPRHQLLYKSKMRVNAGNQGELCD 65
           FGLNPNE+L S IPISIPRWLSSEK  VRLSITRPEVPR QLL+KSK+RV AGNQGEL D
Sbjct: 17  FGLNPNEELESRIPISIPRWLSSEKGNVRLSITRPEVPRQQLLFKSKIRVTAGNQGELFD 76

Query: 66  EDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGS 125
           +DD+LCPVDCVREFKTDEEF+KILD+AKENG LVVVDFYRTSCGSCKYIEQGFAKLCKGS
Sbjct: 77  DDDELCPVDCVREFKTDEEFLKILDRAKENGTLVVVDFYRTSCGSCKYIEQGFAKLCKGS 136

Query: 126 GDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 185
           GDQ+APVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI
Sbjct: 137 GDQEAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAI 196

Query: 186 TKYSSSPLQI 196
           +KYSSS LQI
Sbjct: 197 SKYSSSALQI 206

[Close]

BLAST of PI0001746 vs. TAIR 10
Match: AT1G07700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.6e-58
Identity = 104/133 (78.20%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 59  NQGELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 118
           N  EL DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 119 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDK 178
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

Query: 179 ERILTAITKYSSS 192
           ERI  AI KY+SS
Sbjct: 190 ERIDAAILKYTSS 202

[Close]

BLAST of PI0001746 vs. TAIR 10
Match: AT1G07700.3 (Thioredoxin superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.6e-58
Identity = 104/133 (78.20%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 59  NQGELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 118
           N  EL DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 83  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 142

Query: 119 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDK 178
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDK
Sbjct: 143 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 202

Query: 179 ERILTAITKYSSS 192
           ERI  AI KY+SS
Sbjct: 203 ERIDAAILKYTSS 215

[Close]

BLAST of PI0001746 vs. TAIR 10
Match: AT1G07700.2 (Thioredoxin superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 59  NQGELCDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGF 118
           N  EL DE+DDLCPV+CV EFKTD+E + +L+K+KE   LVVVDFYRT+CGSCKYIEQGF
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 119 AKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPL 161
           +KLCK SGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK +PL
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKVIPL 171

[Close]

BLAST of PI0001746 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 61.6 bits (148), Expect = 8.0e-10
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 81  TDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVM 140
           T E++ + L  A E+  L+V+DF  T C  C++I   FA L K    +   V+F K +V 
Sbjct: 12  TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAK----KHLDVVFFKVDV- 71

Query: 141 DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSS 191
              DE + VAE  +++ +P F F K+G + E      KE I+  + K+ +
Sbjct: 72  ---DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]

BLAST of PI0001746 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 83  EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 142
           E+F+  L  A +   LV+VDFY T CGSC+ +   F KLCK +  +   ++FLK N    
Sbjct: 102 EQFLNALKDAGDR--LVIVDFYGTWCGSCRAM---FPKLCK-TAKEHPNILFLKVN---- 161

Query: 143 YDEQSEVAERLRIKTVPLFHFYK 166
           +DE   + + L +K +P FHFY+
Sbjct: 162 FDENKSLCKSLNVKVLPYFHFYR 174

The following BLAST results are available for this feature:

BLAST of PI0001746 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5C5	6.5e-57	78.20	Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 P...	[more]
Q6YTI3	3.1e-51	72.31	Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
P10639	6.0e-10	35.96	Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3	[more]
P11232	2.3e-09	35.09	Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2	[more]
Q0D840	6.6e-09	33.96	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]

BLAST of PI0001746 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBI1	7.6e-101	96.32	thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 S...	[more]
A0A0A0LP39	9.9e-101	96.32	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300...	[more]
A0A5A7UYD0	6.4e-100	95.79	Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G0...	[more]
A0A6J1CRI9	1.8e-81	79.90	thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927...	[more]
A0A6J1GH82	4.3e-80	83.06	thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 ...	[more]

BLAST of PI0001746 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444622.1	1.6e-100	96.32	PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo]	[more]
XP_004150883.1	2.1e-100	96.32	thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-...	[more]
KAA0060902.1	1.3e-99	95.79	thioredoxin-like 4 [Cucumis melo var. makuwa]	[more]
KAE8652091.1	2.0e-95	98.31	hypothetical protein Csa_022233 [Cucumis sativus]	[more]
XP_038886222.1	1.1e-93	90.53	thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxi...	[more]

BLAST of PI0001746 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07700.1	4.6e-58	78.20	Thioredoxin superfamily protein	[more]
AT1G07700.3	4.6e-58	78.20	Thioredoxin superfamily protein	[more]
AT1G07700.2	1.4e-43	77.45	Thioredoxin superfamily protein	[more]
AT5G42980.1	8.0e-10	32.73	thioredoxin 3	[more]
AT4G26160.1	1.4e-09	39.76	atypical CYS HIS rich thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 80..185 e-value: 2.0E-11 score: 43.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 51..190 score: 9.5235
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 64..192 e-value: 7.2E-20 score: 73.0
None	No IPR available	CDD	cd02947	TRX_family	coord: 89..173 e-value: 3.57969E-19 score: 76.4428
IPR044176	Thioredoxin-like 4, chloroplastic	PANTHER	PTHR47912	THIOREDOXIN-LIKE 4, CHLOROPLASTIC	coord: 47..191
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 61..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001746.1	PI0001746.1	mRNA