PI0001727 (gene) Melon (PI 482460) v1

Overview


Name	PI0001727
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease H
Location	chr11: 12997257 .. 12999819 (-)
RNA-Seq Expression	PI0001727
Synteny	PI0001727

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTAGGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGTTTTCTCCTACGCAAACGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGACTTTGGTATAAGTCTTCCGAGCCGGTTCGAATAACTGGTAAAGGAAAAGCAAAAGCTACTGACACATGCCACATTACTGTAGAAGAATGCAACGATTCTAAAGAAGACAAAAAAAATGAAAGTCAAAGAAGTTCTGTTTTTTATCACATCACCTCCTCTACTGCACGCTCTTCAGTTTTCCAGAGGTTGAGTGCACTAACAAGGGAGGACAAAAATGAAGGGTCAGCTTCCGAGTCCACCCAACTTTCTGCCTTTCAGAGATTAAATACAACTTCGGTTATGCGAACCTCTACCTTCAAAAGGTTAAGTGTGTCGGTGGCAAGAGACCAGAAGAAACCCCTCATAGCTGTTTCAAGCAAGCCTGGCTTAATGACAAGGACGAAAGAATTCGCAGCGCTATTCCATCAAGAATGAAAAGGAAGTTGTTTGTCTCGGTAAACACAAAGGGTTCATTAAAAGTAAAACGACATGATGTTGTTTTTACTCGACCTGAAAATAATGAGCTAGAAGACGAAGCAGATGTGGTAGGTTGTGGCCATGTCACGATAGAAGAGGCACCCGATCAGGAGACATTAGAAAAAGATGTCGAAGATGCCGAAGCTGCCCCATTGTCACTGGAAGATGGGGGCCAATCAATGATTGGTGAGTTAAAGGAAGTCAATCTTAGTACGGTAGAAGAGCCTCGCCCAACCTTCATAAGTGCCCAACTTTCTGATGATGATGAAAACGGATACGTGAGCTTACTCAGAGCATATAAAGATGTCTTCGCATGGTCATATAAAGAAATTCCTAGACTCGAACCAAAAGTTACTGTTCATCGTTTGGCAATTAAACCAGGGCATCGATCGATCAAGCAAGCCCAACGACGGTTTCGACCCGAACTTATCTCTCAAATTGAAGAAGAGGTAAATAAACTCATTGAAGCTGGATTTATTCGTGAAGTCAAGTACCCGACATGGATAGCTAATATTGTTCTCGTAAGAAAGAAAAATGGCCAGCTACGTGTTTGTGTTGACTTTCGCGACCTAAATAACGCATGCCCAAAAGATGACTTTCCCTTGCCTATTATGAAAATCATGGTAGATGCAACTGCAGGGCATGAAGTTTTATCTTTCATGGATGGGTCATCAGGATATAATCAAATTCGAATGGCTCTAGAGGATGAAGAGAAAACGGCGTTTTGAACACCAAAAGGTATATACTGTTATAAAGTAATGCCTTTTGGGTTGAAAAATGTAGGTGTCACATACCAGCGCGCTATGCAAAGAATCTTTGATGATATGCTACATAAAAATGTTGAATGTTATGTCGACGACCTTGTAGTAAAGTCTAAGAAGAAATGTGACCACCTGAAAGACCTGAAGCTTGTCCTTGATTGCCTAAGGAAATATCAACTTAGAATGAACCCTCTTAAGTGTGCCTTCGGCATAACCTCGGGAAGGTTCCTGGGATTCATCGTGAGGCATCGTGGAATTGAAGTTGATCACTCTAAAATTGATGCCATCTAGAAGATGCCAAGTCCAAAAAACCTGCACGAGTTGAGATGACTACAGGACCGTTTGGCCTACATTAGAAGATTTATATCTAATCTCGCGGGTCGATGTCAGCCATTCTAGAGACTGATGAGGAAGGATGCAGTCTTTCATTGGGATCGGTCATGCCAAAATGCATTCGATAGCATAAAGAGGTATTTACTCAACCTTCCAGTCTTGAGTGCGCCTGCAGTTGGAAAACCATTGATATTGTACATTGCAGCTCAAGAAGGTTCGCTCGGAGCACTGCTCGCACAAGAAAATGATAGGCATAAGGAATGTGCACTCTACTATCTAAGTAGAACTCTGATTGGAGCTGAATTGAAGTATTCCCCAATCGAGAAAATGTGTCTCGCCCTGTTCTTTGCAATTGATAAATTAAGGCATTATATGCAGGCATTTACTATACATCTAGTAGCCAAAGCTGACCTTGTTAAATATATCTTATCACACGCGCAACTCCCACTGAAACTGCATGATTGGGAATAGAAAGAATAGTCCTTGCCCTATCCTAGTTCTGAATCCTCTCTTTTCTTGCTCTCCGAGTGGGTCAGCACCCGAAGACTTCTACCGCTACGTGGGGATTTGTCATCAGACGACAGCTATTTCATCCACTCCTCTTCTATTTTCACTCATTTACTAGGCTCTTTGACATATTGAGTTCATGACACACATTTACTTTTTCTCCAACTTCTCTGTCGCAATATTCTTTGCACCTTTTGCTACTCACGAGCAGGTCAGGGACAGGTTCCGGTCACTCCATGCCATTGTGGCGGGAACCACTGAATGGGGGCGGTTTGAATCTCATCGCTGGCGTGTGGAATACAAGTGCATCCAAGCACAGCGCAGCCAAGAGGCAAATTCAGAGTTCTCGGGTTAGGAGCAGCTATCCCTAG

mRNA sequence

ATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTAGGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGTTTTCTCCTACGCAAACGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGACTTTGGTATAAGTCTTCCGAGCCGGTTCGAATAACTGGTAAAGGAAAAGCAAAAGCTACTGACACATGCCACATTACTGTAGAAGAATGCAACGATTCTAAAGAAGACAAAAAAAATGAAAGTCAAAGAAGTTCTGTTTTTTATCACATCACCTCCTCTACTGCACGCTCTTCAGTTTTCCAGAGGTTGAGTGCACTAACAAGGGAGGACAAAAATGAAGGGTCAGCTTCCGAGTCCACCCAACTTTCTGCCTTTCAGAGATTAAATACAACTTCGGTTATGCGAACCTCTACCTTCAAAAGGTCAGGGACAGGTTCCGGTCACTCCATGCCATTGTGGCGGGAACCACTGAATGGGGGCGGTTTGAATCTCATCGCTGGCGTGTGGAATACAAGTGCATCCAAGCACAGCGCAGCCAAGAGGCAAATTCAGAGTTCTCGGGTTAGGAGCAGCTATCCCTAG

Coding sequence (CDS)

ATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTAGGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGTTTTCTCCTACGCAAACGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGACTTTGGTATAAGTCTTCCGAGCCGGTTCGAATAACTGGTAAAGGAAAAGCAAAAGCTACTGACACATGCCACATTACTGTAGAAGAATGCAACGATTCTAAAGAAGACAAAAAAAATGAAAGTCAAAGAAGTTCTGTTTTTTATCACATCACCTCCTCTACTGCACGCTCTTCAGTTTTCCAGAGGTTGAGTGCACTAACAAGGGAGGACAAAAATGAAGGGTCAGCTTCCGAGTCCACCCAACTTTCTGCCTTTCAGAGATTAAATACAACTTCGGTTATGCGAACCTCTACCTTCAAAAGGTCAGGGACAGGTTCCGGTCACTCCATGCCATTGTGGCGGGAACCACTGAATGGGGGCGGTTTGAATCTCATCGCTGGCGTGTGGAATACAAGTGCATCCAAGCACAGCGCAGCCAAGAGGCAAATTCAGAGTTCTCGGGTTAGGAGCAGCTATCCCTAG

Protein sequence

MAKAGYDFTTRTRFKSKIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGKGKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEGSASESTQLSAFQRLNTTSVMRTSTFKRSGTGSGHSMPLWREPLNGGGLNLIAGVWNTSASKHSAAKRQIQSSRVRSSYP

Homology

[Close]

BLAST of PI0001727 vs. ExPASy TrEMBL
Match: A0A5A7V4F2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004870 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41
Identity = 103/157 (65.61%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEP+RITGK
Sbjct: 382 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRITGK 441

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK T+TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 442 GKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 501

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          TS  R S FKR
Sbjct: 502 STCSSTRLSAFQRLNTNAKIVQSISPTSTTRKSAFKR 538

[Close]

BLAST of PI0001727 vs. ExPASy TrEMBL
Match: A0A5D3BTY1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41
Identity = 103/157 (65.61%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEP+RITGK
Sbjct: 382 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRITGK 441

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK T+TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 442 GKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 501

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          TS  R S FKR
Sbjct: 502 STCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKR 538

[Close]

BLAST of PI0001727 vs. ExPASy TrEMBL
Match: A0A5A7UFR3 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002040 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 101/157 (64.33%), Postives = 110/157 (70.06%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KI DER  FSPTQ KLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 336 MAKAGYDFTTRTELKSVKILDERSEFSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGK 395

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK  +TCHITVEE  DS+E KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 396 GKAKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTWITKDSNQV 455

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          T   R S FKR
Sbjct: 456 STCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKR 492

[Close]

BLAST of PI0001727 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.8e-39
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 1    MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
            MAKAGYDFTTRT  KS KIFDER   SPTQTKLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 892  MAKAGYDFTTRTELKSVKIFDERPELSPTQTKLQKQGYSIPNSRAGIGYQSSEPVRITGK 951

Query: 61   GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
            GK K  +TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 952  GKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIALSAVRLSVFQRVSTSITKDSNQV 1011

Query: 121  SASESTQLSAFQRLNTT-----SVMRTSTFKRSGTGSGHSMPLWREPLNGGGLNLIAGVW 180
            S   ST+LSAFQRLNT      S+  T T ++S   S               L++  G  
Sbjct: 1012 STCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKSLR-------------LSVTRGQK 1071

Query: 181  NTSASKHSAAKRQIQSSRVRSSYP 199
              S S  + +    +   +RS++P
Sbjct: 1072 KASISVSNKSSLVTRDEEIRSAFP 1082

[Close]

BLAST of PI0001727 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39
Identity = 101/157 (64.33%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1    MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
            MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 1028 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGK 1087

Query: 61   GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
            GKAK  +TCHITVEE  DS+E KK  SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 1088 GKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 1147

Query: 121  SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
            S   ST+LSAFQRLNT          T   R S FKR
Sbjct: 1148 STCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKR 1184

[Close]

BLAST of PI0001727 vs. NCBI nr
Match: TYK02262.1 (uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 103/157 (65.61%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEP+RITGK
Sbjct: 382 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRITGK 441

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK T+TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 442 GKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 501

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          TS  R S FKR
Sbjct: 502 STCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKR 538

[Close]

BLAST of PI0001727 vs. NCBI nr
Match: KAA0060609.1 (uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 103/157 (65.61%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEP+RITGK
Sbjct: 382 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPIRITGK 441

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK T+TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 442 GKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 501

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          TS  R S FKR
Sbjct: 502 STCSSTRLSAFQRLNTNAKIVQSISPTSTTRKSAFKR 538

[Close]

BLAST of PI0001727 vs. NCBI nr
Match: KAA0052361.1 (uncharacterized protein E6C27_scaffold207G002040 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-39
Identity = 101/157 (64.33%), Postives = 110/157 (70.06%), Query Frame = 0


Query: 1   MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
           MAKAGYDFTTRT  KS KI DER  FSPTQ KLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 336 MAKAGYDFTTRTELKSVKILDERSEFSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGK 395

Query: 61  GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
           GKAK  +TCHITVEE  DS+E KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 396 GKAKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTWITKDSNQV 455

Query: 121 SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
           S   ST+LSAFQRLNT          T   R S FKR
Sbjct: 456 STCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKR 492

[Close]

BLAST of PI0001727 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-39
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 1    MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
            MAKAGYDFTTRT  KS KIFDER   SPTQTKLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 892  MAKAGYDFTTRTELKSVKIFDERPELSPTQTKLQKQGYSIPNSRAGIGYQSSEPVRITGK 951

Query: 61   GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
            GK K  +TCHITVEE  DSKE KK+ SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 952  GKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIALSAVRLSVFQRVSTSITKDSNQV 1011

Query: 121  SASESTQLSAFQRLNTT-----SVMRTSTFKRSGTGSGHSMPLWREPLNGGGLNLIAGVW 180
            S   ST+LSAFQRLNT      S+  T T ++S   S               L++  G  
Sbjct: 1012 STCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKSLR-------------LSVTRGQK 1071

Query: 181  NTSASKHSAAKRQIQSSRVRSSYP 199
              S S  + +    +   +RS++P
Sbjct: 1072 KASISVSNKSSLVTRDEEIRSAFP 1082

[Close]

BLAST of PI0001727 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-38
Identity = 101/157 (64.33%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1    MAKAGYDFTTRTRFKS-KIFDERHGFSPTQTKLQKQGYFIPNSRPGLWYKSSEPVRITGK 60
            MAKAGYDFTTRT  KS KIFDER   SPTQ KLQKQGY IPNSR G+ Y+SSEPVRITGK
Sbjct: 1006 MAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGK 1065

Query: 61   GKAKATDTCHITVEECNDSKEDKKNESQRSSVFYHITSSTARSSVFQRLSALTREDKNEG 120
            GKAK  +TCHITVEE  DS+E KK  SQRSSVF  I  S  R SVFQR+S    +D N+ 
Sbjct: 1066 GKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQV 1125

Query: 121  SASESTQLSAFQRLNT----------TSVMRTSTFKR 147
            S   ST+LSAFQRLNT          T   R S FKR
Sbjct: 1126 STCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKR 1162

The following BLAST results are available for this feature:

BLAST of PI0001727 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4F2	5.3e-41	65.61	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3BTY1	5.3e-41	65.61	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 ...	[more]
A0A5A7UFR3	1.3e-39	64.33	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UJR2	3.8e-39	52.94	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TZU9	4.9e-39	64.33	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]

BLAST of PI0001727 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02262.1	1.1e-40	65.61	uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]	[more]
KAA0060609.1	1.1e-40	65.61	uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa]	[more]
KAA0052361.1	2.7e-39	64.33	uncharacterized protein E6C27_scaffold207G002040 [Cucumis melo var. makuwa]	[more]
KAA0053731.1	7.8e-39	52.94	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	1.0e-38	64.33	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]

BLAST of PI0001727 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001727.1	PI0001727.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity