PI0001696 (gene) Melon (PI 482460) v1

Overview
NamePI0001696
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 18630420 .. 18631230 (+)
RNA-Seq ExpressionPI0001696
SyntenyPI0001696
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAAGGACCCCTTTCTGCAAAGAAGGGAAAGGCGACAGCAACTCTCAGTGAAGAGATAACTAAAGAGTTCGAGAGGGAGTTTGAGCATTTAAGTCCTTTAGAGGACGAGGTGGTGAAACCTTCAGAGACGAGGAAGGTAACTGAAAAAGAGTAATTTTGAAGTAAATCGTAAAAAAAAAAAAAAAATTTGTTATGTATACCAAGAATTCAAAGTTAGACAGAAATATACAAGAGAAGTTTATTATAGTCTTGAAAGAATGCAATGATTAAAGAAGACTAAGTGAAATAAAAGGGTTTAGAAGTATTACTTCAATTACCTCTCAAAGTTATTTGTTTATCCCTTCTTACCAAAATGAATGAGTAGTATATGGAAGATGGGCGTCGAAACCAAGAGAACACTTAAAATTCAAGAGTTGAAAAGGTCAAACAAAGTGTTAGAAATACAAAGAGGGGGGTTGTTTTTTTTTTTAGAAATAATTCTAAGAAAGAACAAGTAGCAAGGGATGAATGATGATAACAAGTAATCAATTCTAAGCTTTTTGCTTCAAGTTTTAAGAAAAGAACTCTTTCTTGGGTAATTAGCATGCTTCTTATCATTGAAAAAGAAAAAAGAAAAGAAAATCAATTAATCCTTTCAAGAATATGCAAGAATAATCATTAAATCTTAACTAGTTCATGATTAATTTCAGCAACTAAAGAATGGTCAAATTAAGACAAAGATTGTTCATTTAAGATTTGCTAAGGAGGGGATAGCCACTACCCTTAGCAAATTTAAAGTCTACTCCAATTTCAATATGCAACAATAA

mRNA sequence

ATGAACCAAGGACCCCTTTCTGCAAAGAAGGGAAAGGCGACAGCAACTCTCAGTGAAGAGATAACTAAAGAGTTCGAGAGGGAGTTTGAGCATTTAAGTCCTTTAGAGGACGAGGTGGTGAAACCTTCAGAGACGAGGAAGCAACTAAAGAATGGTCAAATTAAGACAAAGATTGTTCATTTAAGATTTGCTAAGGAGGGGATAGCCACTACCCTTAGCAAATTTAAAGTCTACTCCAATTTCAATATGCAACAATAA

Coding sequence (CDS)

ATGAACCAAGGACCCCTTTCTGCAAAGAAGGGAAAGGCGACAGCAACTCTCAGTGAAGAGATAACTAAAGAGTTCGAGAGGGAGTTTGAGCATTTAAGTCCTTTAGAGGACGAGGTGGTGAAACCTTCAGAGACGAGGAAGCAACTAAAGAATGGTCAAATTAAGACAAAGATTGTTCATTTAAGATTTGCTAAGGAGGGGATAGCCACTACCCTTAGCAAATTTAAAGTCTACTCCAATTTCAATATGCAACAATAA

Protein sequence

MNQGPLSAKKGKATATLSEEITKEFEREFEHLSPLEDEVVKPSETRKQLKNGQIKTKIVHLRFAKEGIATTLSKFKVYSNFNMQQ
Homology
[Close]
BLAST of PI0001696 vs. ExPASy TrEMBL
Match: A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.0e-06
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 1  MNQGPLSAKKGKATATLSEEITKEFEREFEHLSPLEDEVVKPSETRKQLKNGQIKTKIVH 60
          ++Q P+S KKGK   T SEEI +EFER+ E LSPLEDEVVKP + +  +K   +K +   
Sbjct: 27 IDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKKKVTVKKSVLKKQFDK 86

Query: 61 LRFAKE 67
           R  KE
Sbjct: 87 RREEKE 92

[Close]
BLAST of PI0001696 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 1  MNQGPLSAKKGKATATLSEEITKEFEREFEHLSPLEDEVVKPSETRKQLKNGQIKTKIVH 60
          ++Q P+S KKGK   T SEEI +EFER+ E LSPLEDEVVKP + +  +K   +K +   
Sbjct: 27 IDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKKKVTVKKSVLKKQFDK 86

Query: 61 LRFAKE 67
           R  KE
Sbjct: 87 RREEKE 92

The following BLAST results are available for this feature:
BLAST of PI0001696 vs.
Match NameE-valueIdentityDescription
BLAST of PI0001696 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7W99.0e-0650.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1[more]
BLAST of PI0001696 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44432.11.9e-0550.00hypothetical protein Csa_016511 [Cucumis sativus][more]
BLAST of PI0001696 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001696.1PI0001696.1mRNA