PI0001658 (gene) Melon (PI 482460) v1

Overview


Name	PI0001658
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Chitin-binding type-1 domain-containing protein
Location	chr03: 24581936 .. 24582475 (+)
RNA-Seq Expression	PI0001658
Synteny	PI0001658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATCCTCCGAGGCTACAAGTTAGAAGAGCACCTCATCGAAGAAAGCAAATGTCCGGACAAATACATTCCTGCATCTTCAGCTAGAGAATCTCACTCCTTTGGTACAGATGCTACCACTGACGGAGCATCCTCTTCACAAGGGAGAGTTATTCAAACAGTAAATCCTGACTTTGAAAAATGGGTCACTACTGATTTACTTCTTCTCGGTTGGCTATACAACTCCATGAATCCTGAAGTGGTTGTACAACTGATGGGATTCAGCAATGCAAAAGACCTGTGGGAAGCTACACAGGATCTGTTTGGAGTTCAATCAAGAGCCGAAGAAGACTTCCTACGCCAGATGTTTCAAACTACTCGGAAGGGTAGTATGAAGATGGAAGAGTACCTGAAGACCATGAAATCTTATGCAGATAGCCTCAGTCAAACTGGCAACAGCGTATCCACCCGATCACTAGTTTCGCAAACTCTTTTAGGTCTTGATGAAACGTACAACCCAGTTATTGCAGTTATTCAAGGTAAGTCCGATATCTCCTAG

mRNA sequence

ATGCCCATCCTCCGAGGCTACAAGTTAGAAGAGCACCTCATCGAAGAAAGCAAATGTCCGGACAAATACATTCCTGCATCTTCAGCTAGAGAATCTCACTCCTTTGGTACAGATGCTACCACTGACGGAGCATCCTCTTCACAAGGGAGAGTTATTCAAACAGTAAATCCTGACTTTGAAAAATGGGTCACTACTGATTTACTTCTTCTCGGTTGGCTATACAACTCCATGAATCCTGAAGTGGTTGTACAACTGATGGGATTCAGCAATGCAAAAGACCTGTGGGAAGCTACACAGGATCTGTTTGGAGTTCAATCAAGAGCCGAAGAAGACTTCCTACGCCAGATGTTTCAAACTACTCGGAAGGGTAGTATGAAGATGGAAGAGTACCTGAAGACCATGAAATCTTATGCAGATAGCCTCAGTCAAACTGGCAACAGCGTATCCACCCGATCACTAGTTTCGCAAACTCTTTTAGGTCTTGATGAAACGTACAACCCAGTTATTGCAGTTATTCAAGGTAAGTCCGATATCTCCTAG

Coding sequence (CDS)

ATGCCCATCCTCCGAGGCTACAAGTTAGAAGAGCACCTCATCGAAGAAAGCAAATGTCCGGACAAATACATTCCTGCATCTTCAGCTAGAGAATCTCACTCCTTTGGTACAGATGCTACCACTGACGGAGCATCCTCTTCACAAGGGAGAGTTATTCAAACAGTAAATCCTGACTTTGAAAAATGGGTCACTACTGATTTACTTCTTCTCGGTTGGCTATACAACTCCATGAATCCTGAAGTGGTTGTACAACTGATGGGATTCAGCAATGCAAAAGACCTGTGGGAAGCTACACAGGATCTGTTTGGAGTTCAATCAAGAGCCGAAGAAGACTTCCTACGCCAGATGTTTCAAACTACTCGGAAGGGTAGTATGAAGATGGAAGAGTACCTGAAGACCATGAAATCTTATGCAGATAGCCTCAGTCAAACTGGCAACAGCGTATCCACCCGATCACTAGTTTCGCAAACTCTTTTAGGTCTTGATGAAACGTACAACCCAGTTATTGCAGTTATTCAAGGTAAGTCCGATATCTCCTAG

Protein sequence

MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

Homology

[Close]

BLAST of PI0001658 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.0e-52
Identity = 112/181 (61.88%), Postives = 135/181 (74.59%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPD 60
           +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  
Sbjct: 48  LPILKGYKLEGHLTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI---VNSL 107

Query: 61  FEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQ 120
           FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+ATQD FGVQSRAEEDFLRQM Q
Sbjct: 108 FEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ 167

Query: 121 TTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDI 180
           TTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGK DI
Sbjct: 168 TTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDI 225

[Close]

BLAST of PI0001658 vs. ExPASy TrEMBL
Match: A0A5D3BCH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00140 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 8.7e-43
Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPD 60
           +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  
Sbjct: 48  LPILKGYKLEGHLTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI---VNSL 107

Query: 61  FEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQ 120
           FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+ATQD FGVQSRAEEDFLRQM Q
Sbjct: 108 FEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ 167

Query: 121 TTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT 158
           TTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQT
Sbjct: 168 TTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQT 203

[Close]

BLAST of PI0001658 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 91/179 (50.84%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFE 60
           +PILR YKL ++L  +  CP           +H   TD  T+   S+  +   T+NP +E
Sbjct: 52  LPILRSYKLFDYLTGDKPCP----------PTHLVPTDTPTNIEGSTSSQSSPTLNPTYE 111

Query: 61  KWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTT 120
            W+  D LLLGWLYNSM  +V +Q+MGFS +++LW A Q+LFGVQSRAE D+L+Q+FQ T
Sbjct: 112 AWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQT 171

Query: 121 RKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS 180
            KGS++M EYLK MKS+AD+L+  G+SVS R LVSQ L GLDE YNP++  +QGK ++S
Sbjct: 172 CKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLS 220

[Close]

BLAST of PI0001658 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.3e-42
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 45  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGV 104
           SSS       +NP +E WVTTD LLLGWLYNSM PEV  Q+MG+ NA DLW A Q+LFGV
Sbjct: 21  SSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 80

Query: 105 QSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDET 164
           QS+AEED+LRQ+FQ TRKGS+KM ++L+ MKS+AD+L Q G+ V TRSL+SQ LLGLDE 
Sbjct: 81  QSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140

Query: 165 YNPVIAVIQGKSDIS 180
           YNPV+A IQGK  IS
Sbjct: 141 YNPVVATIQGKRGIS 155

[Close]

BLAST of PI0001658 vs. ExPASy TrEMBL
Match: A0A5A7UY76 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00940 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.8e-41
Identity = 94/152 (61.84%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 16  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYN 75
           E+ CP K+I  +   ES S G    TDGA SS+    +TVNP F++WVT+DLLLLGW+YN
Sbjct: 17  ENPCPPKFI-INQIDESQSDGIAKATDGA-SSRSTETKTVNPKFDQWVTSDLLLLGWIYN 76

Query: 76  SMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMK 135
           SM  EV  QLMGF+ AKDL EA QDLFGVQSR EEDFLR  FQTTRKG+ KME+YL+ MK
Sbjct: 77  SMTAEVAFQLMGFNTAKDLEEAIQDLFGVQSRGEEDFLRHTFQTTRKGNSKMEDYLRIMK 136

Query: 136 SYADSLSQTGNSVSTRSLVSQTLLGLDETYNP 168
           + A++L Q G+ +  RSL+SQ LLGLDE YNP
Sbjct: 137 TNAENLGQAGSPIPLRSLISQVLLGLDEVYNP 166

[Close]

BLAST of PI0001658 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 112/181 (61.88%), Postives = 135/181 (74.59%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPD 60
           +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  
Sbjct: 48  LPILKGYKLEGHLTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI---VNSL 107

Query: 61  FEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQ 120
           FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+ATQD FGVQSRAEEDFLRQM Q
Sbjct: 108 FEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ 167

Query: 121 TTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDI 180
           TTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGK DI
Sbjct: 168 TTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDI 225

[Close]

BLAST of PI0001658 vs. NCBI nr
Match: TYJ96311.1 (uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-42
Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPD 60
           +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  
Sbjct: 48  LPILKGYKLEGHLTGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI---VNSL 107

Query: 61  FEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQ 120
           FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+ATQD FGVQSRAEEDFLRQM Q
Sbjct: 108 FEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQ 167

Query: 121 TTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT 158
           TTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQT
Sbjct: 168 TTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQT 203

[Close]

BLAST of PI0001658 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 91/179 (50.84%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFE 60
           +PILR YKL ++L  +  CP           +H   TD  T+   S+  +   T+NP +E
Sbjct: 52  LPILRSYKLFDYLTGDKPCP----------PTHLVPTDTPTNIEGSTSSQSSPTLNPTYE 111

Query: 61  KWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTT 120
            W+  D LLLGWLYNSM  +V +Q+MGFS +++LW A Q+LFGVQSRAE D+L+Q+FQ T
Sbjct: 112 AWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQT 171

Query: 121 RKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS 180
            KGS++M EYLK MKS+AD+L+  G+SVS R LVSQ L GLDE YNP++  +QGK ++S
Sbjct: 172 CKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLS 220

[Close]

BLAST of PI0001658 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 45  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGV 104
           SSS       +NP +E WVTTD LLLGWLYNSM PEV  Q+MG+ NA DLW A Q+LFGV
Sbjct: 21  SSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 80

Query: 105 QSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDET 164
           QS+AEED+LRQ+FQ TRKGS+KM ++L+ MKS+AD+L Q G+ V TRSL+SQ LLGLDE 
Sbjct: 81  QSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140

Query: 165 YNPVIAVIQGKSDIS 180
           YNPV+A IQGK  IS
Sbjct: 141 YNPVVATIQGKRGIS 155

[Close]

BLAST of PI0001658 vs. NCBI nr
Match: KAA0060208.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ95582.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 9.8e-41
Identity = 94/152 (61.84%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 16  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYN 75
           E+ CP K+I  +   ES S G    TDGA SS+    +TVNP F++WVT+DLLLLGW+YN
Sbjct: 17  ENPCPPKFI-INQIDESQSDGIAKATDGA-SSRSTETKTVNPKFDQWVTSDLLLLGWIYN 76

Query: 76  SMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMK 135
           SM  EV  QLMGF+ AKDL EA QDLFGVQSR EEDFLR  FQTTRKG+ KME+YL+ MK
Sbjct: 77  SMTAEVAFQLMGFNTAKDLEEAIQDLFGVQSRGEEDFLRHTFQTTRKGNSKMEDYLRIMK 136

Query: 136 SYADSLSQTGNSVSTRSLVSQTLLGLDETYNP 168
           + A++L Q G+ +  RSL+SQ LLGLDE YNP
Sbjct: 137 TNAENLGQAGSPIPLRSLISQVLLGLDEVYNP 166

[Close]

BLAST of PI0001658 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08
Identity = 43/145 (29.66%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 34  SFGTDATTDGASSSQGRVIQTVNPDFEK-WVTTDLLLLGWLYNSMNPEVVVQLMGFS-NA 93
           SFG     DG+S        T  P  EK W   D L+  W+Y ++   ++  ++     A
Sbjct: 46  SFGVLGHIDGSS--------TPTPMTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTA 105

Query: 94  KDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTR 153
           +DLW + ++LF     A         +TT    + + EY + +KS +D L+   + +S R
Sbjct: 106 RDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDR 165

Query: 154 SLVSQTLLGLDETYNPVIAVIQGKS 177
            LV   L GL E Y+ ++ VI+ KS
Sbjct: 166 VLVMHLLNGLTEKYDYILNVIKHKS 182

[Close]

BLAST of PI0001658 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.6e-04
Identity = 32/119 (26.89%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 56  NPDFEKWVTTDLLLLGWLYNSMNP-EVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLR 115
           N +   W   D ++   LY ++ P +     +  S ++D+W   ++ F     A    L 
Sbjct: 59  NANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLD 118

Query: 116 QMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQ 174
              +T   G M++ +Y + MK  ADSL      V+ R+LV   L GL+  ++ +I VI+
Sbjct: 119 SELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIK 177

The following BLAST results are available for this feature:

BLAST of PI0001658 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIT7	6.0e-52	61.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BCH9	8.7e-43	59.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DCW4	5.6e-42	50.84	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1D5J0	7.3e-42	65.93	uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7UY76	4.8e-41	61.84	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of PI0001658 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026100.1	1.2e-51	61.88	uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]	[more]
TYJ96311.1	1.8e-42	59.75	uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]	[more]
XP_022151683.1	1.2e-41	50.84	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
XP_022148963.1	1.5e-41	65.93	uncharacterized protein LOC111017501 [Momordica charantia]	[more]
KAA0060208.1	9.8e-41	61.84	Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ95582.1 Integrase, cata...	[more]

BLAST of PI0001658 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48050.1	5.3e-08	29.66	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]
AT1G34070.1	4.6e-04	26.89	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..174 e-value: 3.2E-11 score: 43.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..49
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 2..174
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 2..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001658.1	PI0001658.1	mRNA