PI0001485 (gene) Melon (PI 482460) v1

Overview


Name	PI0001485
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein PSY1-like
Location	chr12: 24304320 .. 24306089 (-)
RNA-Seq Expression	PI0001485
Synteny	PI0001485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCACTTTTGTATTGAAAATAGAAGGCGAGGAGAGGTAGAGATATATATTAATGGCTTCTTCTTCTTCTTCTTCTCCTTCTCGACTTTCCTTTTACTTCTATTTCTTCTTTCTCCTCCTCGTCGCAACTGCCATGGTAGCTTCTGCCGCTCGCTATGCACCTGCAATTCCAATTTCAAGCAATGAGAGTAAAGAACGAAACCCTTTCTAATTCTTCTCTTCTTCACCTAATTTATTCATTTCTCTTTGTTTAATTTAAATTTGTCGTGAATTTTCTATTTAAAGTTTTACGATTTGATAGTTTAACATAGTATCAGAGACATCGATATCTATATCAATTTTTGAAGATAAAACTTTTACAATGTCATTCTTTGTTAGTCGAACTTGTCAAATTTTTTGTGCCAATACATACAAATGATTAAATATGTCTAACCTCTAATTTTATTTTTACGTAGAATTAGGGAAAAAAAATATTTTGGTTCTTATGTATTTCGAGTTTCATTGAGTTTTCAAATGTCTAAATTTACTCTTTTTACTTTCAATAGATTTTATATTCAATCATTCAAAGTATATATTTAGTGATTGTTATCTAATAATAAATTTTGTAAATAAAAAAACAATCTTGTCCATGTTTGAGTTAAAAAAATTTATAAAGAAAATTTAAATAGAGAATATTTTTATGTTTGGAAAAACCAACATTGTGGTTGTAATCAACAAAAAAAGTATTATTATTCTTAAGATTTAGTGATACTATTGACAAAAAATATTTAAAAGTACATGAAATGAAACTCGAAATTAAAGTAGTATATATTTTAACGATTAACGTGTGATCAAAAGGGAAAGCTTTGAGTAAGTGTCATATCCTTTTATATATATGATAATTAACCCTAAAGCCTTATGTTTAATTTTAAAGCTTTATAAATGATTAAATTTATTTTATGGGGTTTTATTGGTAATTTAATATAGTTAATCATATAGTTTTATGGTTAAATTATTATGTTTATACATAGGAAATGATGAAGGGATGATTGGGTTACAAGACTATGGGGATGCACGTGCCAATCATAGACATGATCCTCACCATCCTCTAACTGTCAACAAGGGTAAGTTTAACCCTACACATCCTACTTTATTTTACTTCTATCTTTATCCATACATAATTCAAATAACGGAAAAGATTCTTCAACGATTTCGAGTCTCACCATTCCATATAAATATAAATTGGTATATCATTGAATGTATGAGATAGAAACTATTATTTATTTACTCTTTTAATGACTCGAGTCTTTAACTAAATTATTATTATTTAGATTAAAAGTGGCTAACTTATCTATTTAAATAAATGGATAAAAACTCTATGGTGAAGTTTTTTTTTACAAAAGAAAATCACTCATTCTCGTAAACATAACATTTATACTTAATTGTACTTAAAATGAAAATAAATGAAAATAAGAGAGTTTAACTCATTTGAGGAGGTTGAAGTTGTTGAACTTTGGTATATACTTACAATTATTATAGCAAACCACCTAATACCTAATAAAATTTGTTGTTGTAATTATTATTTATTGATTTTTGTAGGGAATAACAAGGAGTTGGATGGTTAATGAGAAGAGAATATAATGGGATTATGGCCAAGTGGTGGAAGCAACTATTTGGTGTGTGTTGAGATAATTAATACAAGAAATAAACATTTTCACACACTATATCATATTTTTGCATATCCCTTAGTTTTATGTATCGAATTTAAAAGGATATATTGTAACTATTTAC

mRNA sequence

TTTCACTTTTGTATTGAAAATAGAAGGCGAGGAGAGGTAGAGATATATATTAATGGCTTCTTCTTCTTCTTCTTCTCCTTCTCGACTTTCCTTTTACTTCTATTTCTTCTTTCTCCTCCTCGTCGCAACTGCCATGGTAGCTTCTGCCGCTCGCTATGCACCTGCAATTCCAATTTCAAGCAATGAGAGAAATGATGAAGGGATGATTGGGTTACAAGACTATGGGGATGCACGTGCCAATCATAGACATGATCCTCACCATCCTCTAACTGTCAACAAGGGGAATAACAAGGAGTTGGATGGTTAATGAGAAGAGAATATAATGGGATTATGGCCAAGTGGTGGAAGCAACTATTTGGTGTGTGTTGAGATAATTAATACAAGAAATAAACATTTTCACACACTATATCATATTTTTGCATATCCCTTAGTTTTATGTATCGAATTTAAAAGGATATATTGTAACTATTTAC

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTTCTTCTCCTTCTCGACTTTCCTTTTACTTCTATTTCTTCTTTCTCCTCCTCGTCGCAACTGCCATGGTAGCTTCTGCCGCTCGCTATGCACCTGCAATTCCAATTTCAAGCAATGAGAGAAATGATGAAGGGATGATTGGGTTACAAGACTATGGGGATGCACGTGCCAATCATAGACATGATCCTCACCATCCTCTAACTGTCAACAAGGGGAATAACAAGGAGTTGGATGGTTAA

Protein sequence

MASSSSSSPSRLSFYFYFFFLLLVATAMVASAARYAPAIPISSNERNDEGMIGLQDYGDARANHRHDPHHPLTVNKGNNKELDG

Homology

[Close]

BLAST of PI0001485 vs. ExPASy TrEMBL
Match: A0A0A0LXN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532270 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 3  SSSSSSPSRLSFYFYFFFLLLVATAMVASAARYAPAIPISSNERNDEGMIGLQDYGDARA 62
          +SSSS P RLSFYF F  LLL+ATAMVASAAR+APAIP+SSN+RND+ MIGLQDYGDARA
Sbjct: 2  ASSSSPPPRLSFYFSFLILLLLATAMVASAARHAPAIPVSSNKRNDKEMIGLQDYGDARA 61

Query: 63 NHRHDPHHPLTVNKGNNKELDG 85
          NHRHDPHHPL+VNKGNNKELDG
Sbjct: 62 NHRHDPHHPLSVNKGNNKELDG 83

[Close]

BLAST of PI0001485 vs. ExPASy TrEMBL
Match: A0A1S3C5B4 (protein PSY1-like OS=Cucumis melo OX=3656 GN=LOC103497069 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 3  SSSSSSPSRLSFYFYFFFLLLVATAMVASAARYAPAIPISSNERNDEGMIGLQDYGDARA 62
          +SSSSSP RLSFYF F  LLL+ TAMVASAAR+AP IPISSNERNDEGMIGLQDYGDARA
Sbjct: 2  ASSSSSP-RLSFYFSFLLLLLLTTAMVASAARHAPPIPISSNERNDEGMIGLQDYGDARA 61

Query: 63 NHRHDPHHPLTVNKGNNKELDG 85
          NHRHDPHHPLTVNKGN KELDG
Sbjct: 62 NHRHDPHHPLTVNKGNKKELDG 82

[Close]

BLAST of PI0001485 vs. ExPASy TrEMBL
Match: A0A6J1K9X5 (uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.3e-12
Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 10 SRLSFYFYFFFLLLVATAMVAS-AARYAPAIPISSNERNDEGMIGLQDYGDARANHRHDP 69
          S+ S YF   F LL   A+VA+  AR  PA PISS ER+DE MIGL+DYGDARANHRH+P
Sbjct: 3  SQSSLYFSLLFFLLSTAAIVAAFEARNIPANPISSTERHDE-MIGLRDYGDARANHRHEP 62

Query: 70 HHPLTVNKGNNKELD 84
          HHPL V +G  KELD
Sbjct: 63 HHPLGV-EGYKKELD 75

[Close]

BLAST of PI0001485 vs. ExPASy TrEMBL
Match: A0A6J1D9T4 (uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018956 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10
Identity = 48/102 (47.06%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 10  SRLSFYFYFFFLLLVATAMVASAARYAPAIP---------ISSNER-------------- 69
           SRLS YF    LLL   ++V+SAAR+APA           +  +ER              
Sbjct: 3   SRLSLYFSLLILLLATASIVSSAARHAPATSSKLARNGGMVEIHERFAKSRVEDNSMVHH 62

Query: 70  ----NDEGMIGLQDYGDARANHRHDPHHPLTVNKGNNKELDG 85
                 E MIGL DYGD  ANH+HDPHHPL V KGNNKELDG
Sbjct: 63  RLLTGHEEMIGLHDYGDTHANHKHDPHHPLAV-KGNNKELDG 103

[Close]

BLAST of PI0001485 vs. NCBI nr
Match: KGN65819.1 (hypothetical protein Csa_023229 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 3  SSSSSSPSRLSFYFYFFFLLLVATAMVASAARYAPAIPISSNERNDEGMIGLQDYGDARA 62
          +SSSS P RLSFYF F  LLL+ATAMVASAAR+APAIP+SSN+RND+ MIGLQDYGDARA
Sbjct: 2  ASSSSPPPRLSFYFSFLILLLLATAMVASAARHAPAIPVSSNKRNDKEMIGLQDYGDARA 61

Query: 63 NHRHDPHHPLTVNKGNNKELDG 85
          NHRHDPHHPL+VNKGNNKELDG
Sbjct: 62 NHRHDPHHPLSVNKGNNKELDG 83

[Close]

BLAST of PI0001485 vs. NCBI nr
Match: XP_008457363.1 (PREDICTED: protein PSY1-like [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 3  SSSSSSPSRLSFYFYFFFLLLVATAMVASAARYAPAIPISSNERNDEGMIGLQDYGDARA 62
          +SSSSSP RLSFYF F  LLL+ TAMVASAAR+AP IPISSNERNDEGMIGLQDYGDARA
Sbjct: 2  ASSSSSP-RLSFYFSFLLLLLLTTAMVASAARHAPPIPISSNERNDEGMIGLQDYGDARA 61

Query: 63 NHRHDPHHPLTVNKGNNKELDG 85
          NHRHDPHHPLTVNKGN KELDG
Sbjct: 62 NHRHDPHHPLTVNKGNKKELDG 82

[Close]

BLAST of PI0001485 vs. NCBI nr
Match: KAG6607316.1 (hypothetical protein SDJN03_00658, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-12
Identity = 49/75 (65.33%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 10 SRLSFYFYFFFLLLVATAMVA-SAARYAPAIPISSNERNDEGMIGLQDYGDARANHRHDP 69
          SR S YF   F LL   A+VA S AR  PA PI+S ER+DE MIGL+DYGDARANHRH+P
Sbjct: 3  SRSSLYFSLLFFLLSTAAIVAPSEARNIPASPIASTERHDE-MIGLRDYGDARANHRHEP 62

Query: 70 HHPLTVNKGNNKELD 84
          HHPL V +G  KELD
Sbjct: 63 HHPLGV-EGYKKELD 75

[Close]

BLAST of PI0001485 vs. NCBI nr
Match: XP_022998316.1 (uncharacterized protein LOC111492989 [Cucurbita maxima])

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-11
Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 10 SRLSFYFYFFFLLLVATAMVAS-AARYAPAIPISSNERNDEGMIGLQDYGDARANHRHDP 69
          S+ S YF   F LL   A+VA+  AR  PA PISS ER+DE MIGL+DYGDARANHRH+P
Sbjct: 3  SQSSLYFSLLFFLLSTAAIVAAFEARNIPANPISSTERHDE-MIGLRDYGDARANHRHEP 62

Query: 70 HHPLTVNKGNNKELD 84
          HHPL V +G  KELD
Sbjct: 63 HHPLGV-EGYKKELD 75

[Close]

BLAST of PI0001485 vs. NCBI nr
Match: XP_022150920.1 (uncharacterized protein LOC111018956 [Momordica charantia])

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-10
Identity = 48/102 (47.06%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 10  SRLSFYFYFFFLLLVATAMVASAARYAPAIP---------ISSNER-------------- 69
           SRLS YF    LLL   ++V+SAAR+APA           +  +ER              
Sbjct: 3   SRLSLYFSLLILLLATASIVSSAARHAPATSSKLARNGGMVEIHERFAKSRVEDNSMVHH 62

Query: 70  ----NDEGMIGLQDYGDARANHRHDPHHPLTVNKGNNKELDG 85
                 E MIGL DYGD  ANH+HDPHHPL V KGNNKELDG
Sbjct: 63  RLLTGHEEMIGLHDYGDTHANHKHDPHHPLAV-KGNNKELDG 103

The following BLAST results are available for this feature:

BLAST of PI0001485 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXN0	1.5e-29	84.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532270 PE=4 SV=1	[more]
A0A1S3C5B4	1.5e-29	87.80	protein PSY1-like OS=Cucumis melo OX=3656 GN=LOC103497069 PE=4 SV=1	[more]
A0A6J1K9X5	6.3e-12	64.00	uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989...	[more]
A0A6J1D9T4	2.0e-10	47.06	uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of PI0001485 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65819.1	3.1e-29	84.15	hypothetical protein Csa_023229 [Cucumis sativus]	[more]
XP_008457363.1	3.1e-29	87.80	PREDICTED: protein PSY1-like [Cucumis melo]	[more]
KAG6607316.1	3.4e-12	65.33	hypothetical protein SDJN03_00658, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022998316.1	1.3e-11	64.00	uncharacterized protein LOC111492989 [Cucurbita maxima]	[more]
XP_022150920.1	4.2e-10	47.06	uncharacterized protein LOC111018956 [Momordica charantia]	[more]

BLAST of PI0001485 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001485.1	PI0001485.1	mRNA