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PI0001420 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCTTTCCTGCGTTGTTAGTTCTTTTGTTGTATGGCGTTTAGGATGTGTCCGATGGCAACAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGTAAATGCCGTTCCGTTCCCGCCCTTCCTCTTTCTTGTTAACTTACCCCATATGTCCGAGTCCTTTGACCTTTCTCTCCCATCCCATTTTCAGGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCGTGAATGCCAAGTTTCTAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCCGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGACGAGGAGGCAGCTAAGACCTGGATATATCCAGGTCGTCTTTGAATTCCGAACTAATTTTGATTTCTATTGTTTTGGGATTGTTATCCACGGACTCAATTTCTTCTATTCTCACCATGATCCTCTGTGAAACGTACTCCTCACTTACCCCAAGTAACTAGAACATGTAAAATACAAAAGATAACCTAAATTTGTCAACTGATTGTTTAGATCAACTACAAGCTTCTTCAGGTGGCATATGTTTTACTGCAAGAGTTGGACTCCTATTTTGGAATGCAACGAGTCCAATTTACTTCCTCAAACATATAATTTTTGGTAGCCTTTCTTTTGTTTCAACTCTAAGTTTGTTTAATATGACAACATATTCCTTGGAATTTCTTGAGTTCACTGTTTGATATGTAGGCTATAAATTTCACGAAGTCAGTAGATAAGGAGATTTATTTCGTATTATGATACAGTATTTTGCATCATTGACTGCTTGATGGATTATTTCTATTCTTAGAAGTTAGGTGTTAATAGAATTATAATCTGATGTGATGTCAGTTAAATCATGTAGTCAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAGAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAACTTTTGCTATCTTATTGATTGTTAAAGTTATATTATCTCAATGGTATTGTCCAGTGGCCTAATTGAACATAGTTTCAGTAAGGTACAGGTTCTACTAAAGGTTTATAGTGTAATACCAAAACCTGAATTTGAATGAAATGATTCTCTTCCTCAATTGAGGGGAGATGAGGT CGCTTTCCTGCGTTGTTAGTTCTTTTGTTGTATGGCGTTTAGGATGTGTCCGATGGCAACAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCGTGAATGCCAAGTTTCTAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCCGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGACGAGGAGGCAGCTAAGACCTGGATATATCCAGTCAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAGAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAACTTTTGCTATCTTATTGATTGTTAAAGTTATATTATCTCAATGGTATTGTCCAGTGGCCTAATTGAACATAGTTTCAGTAAGGTACAGGTTCTACTAAAGGTTTATAGTGTAATACCAAAACCTGAATTTGAATGAAATGATTCTCTTCCTCAATTGAGGGGAGATGAGGT ATGGCGTTTAGGATGTGTCCGATGGCAACAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCGTGAATGCCAAGTTTCTAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCCGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGACGAGGAGGCAGCTAAGACCTGGATATATCCAGTCAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAGAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAACTTTTGCTATCTTATTGATTGTTAA MAFRMCPMATSNREFTVDDNDDDDDFDWEAAVKEIDVACLSGIHSASSHSLHPSLTESSDATAETPASFPLSEENEKRGTSRQSTLHRFIVNAKFLKKTMDVEKPVQDPRLVEDSVGLVDIDEEAAKTWIYPVNVPLRDYQLAITETALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKGNFCYLIDC Homology
BLAST of PI0001420 vs. ExPASy Swiss-Prot
Match: I3XHK1 (DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.3e-37 Identity = 96/171 (56.14%), Postives = 114/171 (66.67%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy Swiss-Prot
Match: Q8BGE5 (Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3) HSP 1 Score: 95.1 bits (235), Expect = 9.0e-19 Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy Swiss-Prot
Match: Q8IYD8 (Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy Swiss-Prot
Match: Q9UT23 (ATP-dependent DNA helicase fml1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml1 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18 Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy Swiss-Prot
Match: Q7SDF3 (ATP-dependent DNA helicase mph1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mph1 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16 Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy TrEMBL
Match: A0A1S3B3H7 (Fanconi anemia group M protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.2e-94 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy TrEMBL
Match: A0A1S4DTZ2 (Fanconi anemia group M protein isoform X5 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.2e-94 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy TrEMBL
Match: A0A1S4DUR1 (Fanconi anemia group M protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.2e-94 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy TrEMBL
Match: A0A1S3B2A7 (Fanconi anemia group M protein isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.2e-94 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. ExPASy TrEMBL
Match: A0A1S3B3E0 (Fanconi anemia group M protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.2e-94 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. NCBI nr
Match: XP_008441145.1 (PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. NCBI nr
Match: XP_016899456.1 (PREDICTED: Fanconi anemia group M protein isoform X5 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. NCBI nr
Match: XP_008441146.1 (PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. NCBI nr
Match: XP_008441148.1 (PREDICTED: Fanconi anemia group M protein isoform X6 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. NCBI nr
Match: XP_016899455.1 (PREDICTED: Fanconi anemia group M protein isoform X3 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of PI0001420 vs. TAIR 10
Match: AT1G35530.1 (DEAD/DEAH box RNA helicase family protein ) HSP 1 Score: 154.8 bits (390), Expect = 6.8e-38 Identity = 94/169 (55.62%), Postives = 112/169 (66.27%), Query Frame = 0
BLAST of PI0001420 vs. TAIR 10
Match: AT1G35530.2 (DEAD/DEAH box RNA helicase family protein ) HSP 1 Score: 154.8 bits (390), Expect = 6.8e-38 Identity = 94/169 (55.62%), Postives = 112/169 (66.27%), Query Frame = 0
BLAST of PI0001420 vs. TAIR 10
Match: AT1G36020.1 (BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07 Identity = 41/115 (35.65%), Postives = 56/115 (48.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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