PI0001411 (gene) Melon (PI 482460) v1

Overview


Name	PI0001411
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr06: 10035748 .. 10036498 (-)
RNA-Seq Expression	PI0001411
Synteny	PI0001411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGACCATCCTGCAGTGGGTTTGGGTGGAATGAAGAATATCAGTGCATCATCGCAGAACGCGACTTGTTTGATAATTGGGTCAAGGTACAGTTTATTTAACGCGAATTTTACATAATTTAGAAATCACAACCATCTACTAATGTGTTGTTTCATGTATGTACAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACAATTTGTCGTACGTGTTCGGTAGAGATCGGACAACAGGAGCACGTGCGGAGACGTTTGCTGACGTGGGATCTAATGTGCCAAATAGTTTTAACGACAGTGTTCCACTTAATGATCTACATGACGAAGACATCCCGACGATGTATAGCCAAGGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGACCAACATAGTGAAACAGTGGAGGTGATCAAGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTCATGAAACAACTGGATGATATCCCCGAACTACGGAGTCGAGATAGGGTAAAGCTTCTACGAATATTATTCCGTAGTGTTGATAACACACAGGGATTCCTGTCTGTCCCACCGGAACTGAAATTGGAGTATTGCAGTATTTTGTTGGAAGAAAATGTTTGA

mRNA sequence

ATGAGGGGACCATCCTGCAGTGGGTTTGGGTGGAATGAAGAATATCAGTGCATCATCGCAGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACAATTTGTCGTACGTGTTCGGTAGAGATCGGACAACAGGAGCACGTGCGGAGACGTTTGCTGACGTGGGATCTAATGTGCCAAATAGTTTTAACGACAGTGTTCCACTTAATGATCTACATGACGAAGACATCCCGACGATGTATAGCCAAGGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGACCAACATAGTGAAACAGTGGAGGTGATCAAGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTCATGAAACAACTGGATGATATCCCCGAACTACGGAGTCGAGATAGGGTAAAGCTTCTACGAATATTATTCCGTAGTGTTGATAACACACAGGGATTCCTGTCTGTCCCACCGGAACTGAAATTGGAGTATTGCAGTATTTTGTTGGAAGAAAATGTTTGA

Coding sequence (CDS)

ATGAGGGGACCATCCTGCAGTGGGTTTGGGTGGAATGAAGAATATCAGTGCATCATCGCAGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACAATTTGTCGTACGTGTTCGGTAGAGATCGGACAACAGGAGCACGTGCGGAGACGTTTGCTGACGTGGGATCTAATGTGCCAAATAGTTTTAACGACAGTGTTCCACTTAATGATCTACATGACGAAGACATCCCGACGATGTATAGCCAAGGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGACCAACATAGTGAAACAGTGGAGGTGATCAAGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTCATGAAACAACTGGATGATATCCCCGAACTACGGAGTCGAGATAGGGTAAAGCTTCTACGAATATTATTCCGTAGTGTTGATAACACACAGGGATTCCTGTCTGTCCCACCGGAACTGAAATTGGAGTATTGCAGTATTTTGTTGGAAGAAAATGTTTGA

Protein sequence

MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV

Homology

[Close]

BLAST of PI0001411 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 166/223 (74.44%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 60
           MRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYD+LSYVFG+DR TG
Sbjct: 84  MRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATG 143

Query: 61  ARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNC 120
           AR+ETF +VGSNV N FND++PL D HDEDIPTMYSQGV MSPD+M G RAG++S+ RNC
Sbjct: 144 ARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNC 203

Query: 121 SSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPE 180
           SS SKRKRG +  ETVEVI++ M+F N+QL+AIADWPKEKRA EVE+RA+V+KQL DIP+
Sbjct: 204 SSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPK 263

Query: 181 LRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV 224
           LRS+DR KL++ILFRS++  +GFLS+P ELKLEYC+ILL+  V
Sbjct: 264 LRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNIV 306

[Close]

BLAST of PI0001411 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 166/223 (74.44%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 60
           MRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYD+LSYVFG+DR TG
Sbjct: 84  MRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATG 143

Query: 61  ARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNC 120
           AR+ETF +VGSNV N FND++PL D HDEDIPTMYSQGV MSPD+M G RAG++S+ RNC
Sbjct: 144 ARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNC 203

Query: 121 SSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPE 180
           SS SKRKRG +  ETVEVI++ M+F N+QL+AIADWPKEKRA EVE+RA+V+KQL DIP+
Sbjct: 204 SSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPK 263

Query: 181 LRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV 224
           LRS+DR KL++ILFRS++  +GFLS+P ELKLEYC+ILL+  V
Sbjct: 264 LRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNIV 306

[Close]

BLAST of PI0001411 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.9e-82
Identity = 150/223 (67.26%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 1   MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 60
           MRGPSCSGFGWNEE+QCIIAERDLFD+WVKSHP  KGLLHKSFPYYD+LSYVFG+DR TG
Sbjct: 366 MRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATG 425

Query: 61  ARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNC 120
           AR+ETF DVGSNVPN FND++PL D HDEDIPTMYSQGV +SPD+M G RA         
Sbjct: 426 ARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA--------- 485

Query: 121 SSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPE 180
                           EVI++ M+F N+QL+AIADW KEKRA E+E+RA+V+KQL DIPE
Sbjct: 486 ----------------EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPE 545

Query: 181 LRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV 224
           LRS+ R KL++ILFRS++   GFLS+P ELKLEYC+ILL+ NV
Sbjct: 546 LRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV 563

[Close]

BLAST of PI0001411 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.0e-72
Identity = 138/185 (74.59%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 36  KGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMY 95
           K LLHKSFPYYD+L YVFG+DR T AR+ETFADVGSNVPN FN  VPL+D HD+DIP MY
Sbjct: 312 KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMY 371

Query: 96  SQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIAD 155
           SQGV MSPD+M G RAG++S+ +NCSSGSKRK+G +H ETVEVIK+A++F NDQL+AIA+
Sbjct: 372 SQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIAN 431

Query: 156 WPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYC 215
           WPKEKRATEVELRAEVMKQL DIPEL+SRDR KL++ILFRSV+  +GFLS+P E KLEYC
Sbjct: 432 WPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYC 491

Query: 216 SILLE 221
           +ILL+
Sbjct: 492 NILLQ 496

[Close]

BLAST of PI0001411 vs. ExPASy TrEMBL
Match: A0A5D3CVB7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00360 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.9e-72
Identity = 137/196 (69.90%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 25  FDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLN 84
           F  W++SHP  KGLL+KSFPYYD++SYVFG+D+ T AR+ETFADVGSN+PN FND VPL 
Sbjct: 7   FSWWLESHPTVKGLLNKSFPYYDDVSYVFGKDQATEARSETFADVGSNIPNMFNDGVPLG 66

Query: 85  DLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMD 144
           D H EDIPTMYSQGV MS D+M GTRAG++S+ RNCSS SKRK+G QH ETVEVI++AM 
Sbjct: 67  DSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMK 126

Query: 145 FANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFL 204
           F NDQL+AIADW KEKRA +VELRA V+KQL DIP+L++RDR K+++ILF SV+  +GFL
Sbjct: 127 FGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFL 186

Query: 205 SVPPELKLEYCSILLE 221
           S+P ELKLEYC++LLE
Sbjct: 187 SIPTELKLEYCNVLLE 202

[Close]

BLAST of PI0001411 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 166/223 (74.44%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 60
           MRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYD+LSYVFG+DR TG
Sbjct: 84  MRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATG 143

Query: 61  ARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNC 120
           AR+ETF +VGSNV N FND++PL D HDEDIPTMYSQGV MSPD+M G RAG++S+ RNC
Sbjct: 144 ARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNC 203

Query: 121 SSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPE 180
           SS SKRKRG +  ETVEVI++ M+F N+QL+AIADWPKEKRA EVE+RA+V+KQL DIP+
Sbjct: 204 SSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPK 263

Query: 181 LRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV 224
           LRS+DR KL++ILFRS++  +GFLS+P ELKLEYC+ILL+  V
Sbjct: 264 LRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNIV 306

[Close]

BLAST of PI0001411 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 150/223 (67.26%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 1   MRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 60
           MRGPSCSGFGWNEE+QCIIAERDLFD+WVKSHP  KGLLHKSFPYYD+LSYVFG+DR TG
Sbjct: 366 MRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATG 425

Query: 61  ARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNC 120
           AR+ETF DVGSNVPN FND++PL D HDEDIPTMYSQGV +SPD+M G RA         
Sbjct: 426 ARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA--------- 485

Query: 121 SSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPE 180
                           EVI++ M+F N+QL+AIADW KEKRA E+E+RA+V+KQL DIPE
Sbjct: 486 ----------------EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPE 545

Query: 181 LRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYCSILLEENV 224
           LRS+ R KL++ILFRS++   GFLS+P ELKLEYC+ILL+ NV
Sbjct: 546 LRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV 563

[Close]

BLAST of PI0001411 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 283.1 bits (723), Expect = 2.1e-72
Identity = 138/185 (74.59%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 36  KGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLNDLHDEDIPTMY 95
           K LLHKSFPYYD+L YVFG+DR T AR+ETFADVGSNVPN FN  VPL+D HD+DIP MY
Sbjct: 312 KDLLHKSFPYYDDLFYVFGKDRATRARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMY 371

Query: 96  SQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMDFANDQLRAIAD 155
           SQGV MSPD+M G RAG++S+ +NCSSGSKRK+G +H ETVEVIK+A++F NDQL+AIA+
Sbjct: 372 SQGVHMSPDEMFGIRAGQASERKNCSSGSKRKQGSKHYETVEVIKSAIEFGNDQLKAIAN 431

Query: 156 WPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFLSVPPELKLEYC 215
           WPKEKRATEVELRAEVMKQL DIPEL+SRDR KL++ILFRSV+  +GFLS+P E KLEYC
Sbjct: 432 WPKEKRATEVELRAEVMKQLQDIPELQSRDRAKLIQILFRSVEAIEGFLSIPTERKLEYC 491

Query: 216 SILLE 221
           +ILL+
Sbjct: 492 NILLQ 496

[Close]

BLAST of PI0001411 vs. NCBI nr
Match: KAA0042340.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15465.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.6 bits (719), Expect = 6.0e-72
Identity = 137/196 (69.90%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 25  FDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLN 84
           F  W++SHP  KGLL+KSFPYYD++SYVFG+D+ T AR+ETFADVGSN+PN FND VPL 
Sbjct: 7   FSWWLESHPTVKGLLNKSFPYYDDVSYVFGKDQATEARSETFADVGSNIPNMFNDGVPLG 66

Query: 85  DLHDEDIPTMYSQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMD 144
           D H EDIPTMYSQGV MS D+M GTRAG++S+ RNCSS SKRK+G QH ETVEVI++AM 
Sbjct: 67  DSHHEDIPTMYSQGVLMSLDEMFGTRAGQASERRNCSSRSKRKQGSQHYETVEVIRSAMK 126

Query: 145 FANDQLRAIADWPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFL 204
           F NDQL+AIADW KEKRA +VELRA V+KQL DIP+L++RDR K+++ILF SV+  +GFL
Sbjct: 127 FGNDQLKAIADWLKEKRAMKVELRALVVKQLQDIPKLQNRDRPKIIQILFHSVEGIEGFL 186

Query: 205 SVPPELKLEYCSILLE 221
           S+P ELKLEYC++LLE
Sbjct: 187 SIPTELKLEYCNVLLE 202

[Close]

BLAST of PI0001411 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-70
Identity = 136/194 (70.10%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 30  KSHPGAKGLLHKSFPYYDNLSYVFGRDRTTGARAETFADVGSNVPNSFNDSVPLNDLHDE 89
           +SHP AKGLLHKSFPYYD+LSYVFG D  TGA +ETFAD GSNV N FND VPL D H++
Sbjct: 70  RSHPAAKGLLHKSFPYYDDLSYVFGNDGATGAHSETFADGGSNVSNMFNDGVPLGDSHNQ 129

Query: 90  DIPTMYSQGVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGDQHSETVEVIKNAMDFANDQ 149
           DI T+YSQGV MS D++ G RAG++S+ RN SSGSKRKRG +H E VEVI +A +F NDQ
Sbjct: 130 DILTIYSQGVHMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGNDQ 189

Query: 150 LRAIADWPKEKRATEVELRAEVMKQLDDIPELRSRDRVKLLRILFRSVDNTQGFLSVPPE 209
           L+ I DWPKEKRATEVELR EV+KQL DIP+LRS+DR KL++ILFRSV+  +GFLS+P +
Sbjct: 190 LKTITDWPKEKRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIPTK 249

Query: 210 LKLEYCSILLEENV 224
           LKLEYC+ILLE NV
Sbjct: 250 LKLEYCNILLENNV 263

[Close]

BLAST of PI0001411 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 17/54 (31.48%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 7   SGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVFGRDRTTG 61
           +GF W+     +IA+ D+++ ++++HP A+    K+ P Y NL ++FG++ + G
Sbjct: 399 NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDG 452

[Close]

BLAST of PI0001411 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04
Identity = 15/46 (32.61%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 8   GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVF 54
           GF W++  Q ++A+  ++D ++K HP ++    KS P Y +L  V+
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY 133

[Close]

BLAST of PI0001411 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04
Identity = 15/46 (32.61%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 8   GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDNLSYVF 54
           GF W++  Q ++A+  ++D ++K HP ++    KS P Y +L  V+
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY 133

The following BLAST results are available for this feature:

BLAST of PI0001411 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	1.2e-94	74.44	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	1.2e-94	74.44	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5D3DG22	6.9e-82	67.26	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SQU2	1.0e-72	74.59	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3CVB7	2.9e-72	69.90	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0001411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	2.5e-94	74.44	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0062747.1	1.4e-81	67.26	retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p...	[more]
KAA0033290.1	2.1e-72	74.59	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nucleas...	[more]
KAA0042340.1	6.0e-72	69.90	retrotransposon protein [Cucumis melo var. makuwa] >TYK15465.1 retrotransposon p...	[more]
KAA0031678.1	2.5e-70	70.10	retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon p...	[more]

BLAST of PI0001411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	9.4e-07	31.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	4.4e-04	32.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	4.4e-04	32.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..133
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001411.1	PI0001411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding