PI0001380 (gene) Melon (PI 482460) v1

Overview


Name	PI0001380
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	B-box type zinc finger family protein
Location	chr12: 4587634 .. 4589090 (+)
RNA-Seq Expression	PI0001380
Synteny	PI0001380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCATCACAAGAATCTGAATCCAATCCAAGAGATTTGGAGTTGAAAATTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCTAATGCGTATTGTGAATCGGACGAAGCCAATTTGTGTTGGAGCTGCGATGCTAATGTTCATTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGTTTTGTGTTGTTCCTCAAAATGTTGCTTCTCTACAATTTCATCATCAGGATCATCGCCATTCTGGTTCCTCTACCACCAGAGATTTTGATAATAATAATAATCATCATCATCATGGGGATGATGAAGAGAATCAAGTGGTTCCGTTGTCACCACCGCCAGTTTCGACCTAGTTCTTACTGCTCTCCATTGTTTCTTCTTCTTTGTTTACATCTCTTGAGTAATAGCATTGTCCCAGGTCATGAAGAATCTCAATCCAATGGGTATGAGCTTTTTTTTTTTTTTTTTAGCTAAAATATTTATAAAATATAACAAAATTTTAGATTTATCATAGACACCACCTATCAATATTTATCGGTGTCTATGGATAGAAATTAAAATTTGTTATATTTTGTAAATATTTTTTATTATTTTATTATTTTTAATAATATTTTTTTCCTTCCAGAGTATGGAAAAATGGATTCTGTTGTAGTTGCAAGTGAAATGTGAATAACAATTCCCAATAATATGCCTCATTTTGGCCTTTCCTTTTTAGTGGGGATCCCATGATTATTCATATTCACAATTTTTTTCAATATGATCTTCTTCTATTATTATAAATCAATTGGGTAGGGAGAGGTTTCAGTTCTGACAATATATTATATATTATATAGGATAGGTTGTTTAAATATAATATAACATATACAACAAGAATAAAATAATTGTATATATATTACAAAAATTGATAAAAGACTAAAAAGTTCATCTTCGACTCCATTTCAAAGGTTTCTTCCTTGTTTCTCAAAATTAAAACTTATTGGTGATATCATCATTGATAGCTTTCAATTTGAGAAATATATTATCAGTTAATGATAGCAACCGGGTGAACTTGACCTTTAAAAAAAACATTCGTCAACATTCATGTCAAAATTAATGAACAATAAGATGGTCAAAGTAAATTTAGTTTAGTAATATTGACATATCTTTCATCTTTCTAAAGATCAAATATTCAATTTTCCACCGTACCAAAAAAAAAATTCACGAGTTGAGATAGTTGAAATTAATAAACTTTTTAAGTTAATAAACTCTTTTATGTGTTCAAGGTGAAAATTTTAAATTCATGAACCAATCACATGTAGTTTATTTACTTTAATTTGTTAATAAACATTTTGTGAGAGAAATAAAATGAATTTTATAAAGTTTGATGTAA

mRNA sequence

ATGCCCTCATCACAAGAATCTGAATCCAATCCAAGAGATTTGGAGTTGAAAATTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCTAATGCGTATTGTGAATCGGACGAAGCCAATTTGTGTTGGAGCTGCGATGCTAATGTTCATTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGTTTTGTGTTGTTCCTCAAAATGTTGCTTCTCTACAATTTCATCATCAGGATCATCGCCATTCTGGTTCCTCTACCACCAGAGATTTTGATAATAATAATAATCATCATCATCATGGGGATGATGAAGAGAATCAAGTGGTTCCGTTGTCACCACCGCCAGTTTCGACCTATTTGATGTAA

Coding sequence (CDS)

ATGCCCTCATCACAAGAATCTGAATCCAATCCAAGAGATTTGGAGTTGAAAATTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCTAATGCGTATTGTGAATCGGACGAAGCCAATTTGTGTTGGAGCTGCGATGCTAATGTTCATTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGTTTTGTGTTGTTCCTCAAAATGTTGCTTCTCTACAATTTCATCATCAGGATCATCGCCATTCTGGTTCCTCTACCACCAGAGATTTTGATAATAATAATAATCATCATCATCATGGGGATGATGAAGAGAATCAAGTGGTTCCGTTGTCACCACCGCCAGTTTCGACCTATTTGATGTAA

Protein sequence

MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVPLSPPPVSTYLM

Homology

[Close]

BLAST of PI0001380 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09
Identity = 31/88 (35.23%), Postives = 43/88 (48.86%), Query Frame = 0


Query: 22  IKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPK 81
           + CELC   A  YCE+D A LC  CD  VHSANF+  +H R ++C  C+  T     G  
Sbjct: 30  VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDN 89

Query: 82  LGPTLSLCQFCVVPQNVASLQFHHQDHR 110
               L   +       +A ++ H  DH+
Sbjct: 90  FNVVLPEIRM------IARIEEHSSDHK 111

[Close]

BLAST of PI0001380 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 22 IKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPT 74
          ++CELCD  A+ +CE+D A LC  CD  VH ANF+  +H R +LC  CQ  T
Sbjct: 29 VRCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]

BLAST of PI0001380 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 23 KCELCDC-RANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQ-SPTPWTATGP 82
          +C+ C   +A  YC+SD A LC +CD NVHSAN + ++H+R LLC+ C   PT       
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC--- 63

Query: 83 KLGPTLSLCQFC 93
           +   +SLCQ C
Sbjct: 64 -MNENVSLCQGC 71

[Close]

BLAST of PI0001380 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 24  CELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL- 83
           CELC   A+ +C +D A LC SCDA  H++NF+  +H R ++C  C+S T    +GP L 
Sbjct: 5   CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLP 64

Query: 84  -GPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRD 119
             P  + C         +SL           SSTTRD
Sbjct: 65  WPPRTTCCSESSSSSCCSSLDCVSSSEL---SSTTRD 98

[Close]

BLAST of PI0001380 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 24 CELC-DCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 83
          C+ C + R+  YC SD A LC SCD NVHSAN + ++HSR L+C+ C +         + 
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE- 64

Query: 84 GPTLSLCQFC 93
             +SLCQ C
Sbjct: 65 --RVSLCQNC 71

[Close]

BLAST of PI0001380 vs. ExPASy TrEMBL
Match: A0A5A7UTR2 (B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00230 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 135/143 (94.41%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEA+LCWSCD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFD 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDH HSGSSTTRDFD
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFD 120

Query: 121 NNNNHHHHGDDEENQVVPLSPPP 144
             + HHH GDDEENQVVPLSPPP
Sbjct: 121 --HRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of PI0001380 vs. ExPASy TrEMBL
Match: A0A1S3B4I3 (B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 135/143 (94.41%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEA+LCWSCD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFD 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDH HSGSSTTRDFD
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFD 120

Query: 121 NNNNHHHHGDDEENQVVPLSPPP 144
             + HHH GDDEENQVVPLSPPP
Sbjct: 121 --HRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of PI0001380 vs. ExPASy TrEMBL
Match: A0A0A0LS80 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.2e-59
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 19  MKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MKNIKCELCDCRANAYCESDE++LCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT
Sbjct: 1   MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVP 138
           GPKLGPTLSLCQ CV+PQNVASL+F HQD  HSGSSTTRDFD    HH + DDEENQVVP
Sbjct: 61  GPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFD----HHPNEDDEENQVVP 120

Query: 139 LSPPPVST 147
           LSPPPVS+
Sbjct: 121 LSPPPVSS 124

[Close]

BLAST of PI0001380 vs. ExPASy TrEMBL
Match: A0A6J1JY69 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489941 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-36
Identity = 81/124 (65.32%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 23  KCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
           KCELC  RAN YCESD+ANLCWSCDANVHSANFIVEKHSR LLC ICQS TPWTATG KL
Sbjct: 4   KCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTATGRKL 63

Query: 83  GPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVPLSPP 142
            PT+S+CQ C+  QN  +      +H+ S     RD D+NN       D+ENQVVPLSPP
Sbjct: 64  SPTISVCQSCLNAQNNVA-----DNHQDSSDGYRRDDDDNN-------DDENQVVPLSPP 115

Query: 143 PVST 147
           PVS+
Sbjct: 124 PVSS 115

[Close]

BLAST of PI0001380 vs. ExPASy TrEMBL
Match: A0A6J1GR34 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111456702 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.7e-34
Identity = 78/124 (62.90%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 23  KCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
           KCELC  RAN YCESD+ANLCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63

Query: 83  GPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVPLSPP 142
            PT+S+CQ C+  QN  +      +H+ SG                 DDEE QVVPLSP 
Sbjct: 64  SPTISVCQSCLNAQNNVA-----DNHQDSGD----------------DDEEYQVVPLSPL 106

Query: 143 PVST 147
           PVS+
Sbjct: 124 PVSS 106

[Close]

BLAST of PI0001380 vs. NCBI nr
Match: XP_008441923.1 (PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa] >TYK26363.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 135/143 (94.41%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKH 60
           MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEA+LCWSCD+NVHSANFIVEKH
Sbjct: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFD 120
           SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDH HSGSSTTRDFD
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFD 120

Query: 121 NNNNHHHHGDDEENQVVPLSPPP 144
             + HHH GDDEENQVVPLSPPP
Sbjct: 121 --HRHHHSGDDEENQVVPLSPPP 141

[Close]

BLAST of PI0001380 vs. NCBI nr
Match: XP_038895968.1 (zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67
Identity = 122/146 (83.56%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPSSQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKH 60
           MPSSQES+SNPRDLE KIMK IKCELCDCRANAYCESD+A+LCWSCDANVHSANFIVEKH
Sbjct: 1   MPSSQESDSNPRDLEFKIMKKIKCELCDCRANAYCESDQASLCWSCDANVHSANFIVEKH 60

Query: 61  SRILLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFD 120
           SRILLCQICQSPTPWTATGPKLGPT+SLCQFCV+PQNV SLQ HHQ+HRHS SS++RDF 
Sbjct: 61  SRILLCQICQSPTPWTATGPKLGPTISLCQFCVIPQNVGSLQIHHQNHRHSASSSSRDF- 120

Query: 121 NNNNHHHHGDDEENQVVPLSPPPVST 147
             ++HHH  DDE+NQVVP+SPPP S+
Sbjct: 121 --HHHHHAADDEQNQVVPMSPPPTSS 143

[Close]

BLAST of PI0001380 vs. NCBI nr
Match: KAE8652697.1 (hypothetical protein Csa_014317 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 123/143 (86.01%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 4   SQESESNPRDLELKIMKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRI 63
           ++ESESNP DLELK MKNIKCELCDCRANAYCESDE++LCWSCDANVHSANFIVEKHSRI
Sbjct: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185

Query: 64  LLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNN 123
           LLCQICQSPTPWTATGPKLGPTLSLCQ CV+PQNVASL+F HQD  HSGSSTTRDFD   
Sbjct: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFD--- 245

Query: 124 NHHHHGDDEENQVVPLSPPPVST 147
            HH + DDEENQVVPLSPPPVS+
Sbjct: 246 -HHPNEDDEENQVVPLSPPPVSS 264

[Close]

BLAST of PI0001380 vs. NCBI nr
Match: XP_023542180.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 8.5e-38
Identity = 85/128 (66.41%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 19  MKNIKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 78
           MKN KCELC  RAN YCESD+ANLCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 1   MKN-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60

Query: 79  GPKLGPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVP 138
           G KL PT+S+CQ C+  QN  +      +H+ S     RD DN        DD+ENQVVP
Sbjct: 61  GRKLSPTISVCQSCLNAQNNVA-----DNHQDSSDGYRRDNDN--------DDDENQVVP 114

Query: 139 LSPPPVST 147
           LSPPPVS+
Sbjct: 121 LSPPPVSS 114

[Close]

BLAST of PI0001380 vs. NCBI nr
Match: KAG6573228.1 (putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012401.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-36
Identity = 81/124 (65.32%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 23  KCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
           KCELC  RAN YCESD+ANLCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL
Sbjct: 4   KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 63

Query: 83  GPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNHHHHGDDEENQVVPLSPP 142
            PT+S+CQ C+  QN  ++  +HQD  H               H   DD+ENQVVPLSPP
Sbjct: 64  SPTISVCQSCLNAQN--NVADNHQDSSH------------GYRHDDNDDDENQVVPLSPP 113

Query: 143 PVST 147
           PVS+
Sbjct: 124 PVSS 113

[Close]

BLAST of PI0001380 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.3e-24
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 23  KCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
           KC+LC+  A  YCESD+A+LCW CD  VH ANF+V KH+R LLC  CQS TPW ATG +L
Sbjct: 4   KCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63

Query: 83  GPTLSLCQFCVVPQNVASLQFHHQDHRHSGSSTTRDFDNNNNH----HHHGDDEEN 135
           GPT S+C+ CV  +N    + +     + G      F++  +     H  GDD E+
Sbjct: 64  GPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAES 119

[Close]

BLAST of PI0001380 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.7e-23
Identity = 57/123 (46.34%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 23  KCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 82
           KCELC   A  YCESD+A+LCW CD  VH ANF+V KH R LLC  CQS TPW A+G  L
Sbjct: 5   KCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNL 64

Query: 83  GPTLSLCQFCVV--PQNVASL----QFHHQDHRHSG-SSTTRDFDNNNNHHHHGDDEENQ 139
           GPT+S+C+ C+     N +SL    Q  +Q+    G +     +D  ++     ++ ENQ
Sbjct: 65  GPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVENQ 124

[Close]

BLAST of PI0001380 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10
Identity = 31/88 (35.23%), Postives = 43/88 (48.86%), Query Frame = 0


Query: 22  IKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPK 81
           + CELC   A  YCE+D A LC  CD  VHSANF+  +H R ++C  C+  T     G  
Sbjct: 30  VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDN 89

Query: 82  LGPTLSLCQFCVVPQNVASLQFHHQDHR 110
               L   +       +A ++ H  DH+
Sbjct: 90  FNVVLPEIRM------IARIEEHSSDHK 111

[Close]

BLAST of PI0001380 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 22 IKCELCDCRANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQSPT 74
          ++CELCD  A+ +CE+D A LC  CD  VH ANF+  +H R +LC  CQ  T
Sbjct: 29 VRCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

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BLAST of PI0001380 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 23 KCELCDC-RANAYCESDEANLCWSCDANVHSANFIVEKHSRILLCQICQ-SPTPWTATGP 82
          +C+ C   +A  YC+SD A LC +CD NVHSAN + ++H+R LLC+ C   PT       
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC--- 63

Query: 83 KLGPTLSLCQFC 93
           +   +SLCQ C
Sbjct: 64 -MNENVSLCQGC 71

The following BLAST results are available for this feature:

BLAST of PI0001380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3I2	5.0e-09	35.23	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LRM4	1.5e-08	50.00	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
O23379	1.9e-08	43.06	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LJB7	2.5e-08	37.11	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q9LUA9	2.5e-08	42.86	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]

BLAST of PI0001380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTR2	3.0e-73	94.41	B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4I3	3.0e-73	94.41	B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 S...	[more]
A0A0A0LS80	7.2e-59	87.50	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 ...	[more]
A0A6J1JY69	2.9e-36	65.32	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GR34	4.7e-34	62.90	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of PI0001380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441923.1	6.2e-73	94.41	PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box ...	[more]
XP_038895968.1	3.0e-67	83.56	zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida]	[more]
KAE8652697.1	1.1e-64	86.01	hypothetical protein Csa_014317 [Cucumis sativus]	[more]
XP_023542180.1	8.5e-38	66.41	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573228.1	1.6e-36	65.32	putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma s...	[more]

BLAST of PI0001380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27310.1	3.3e-24	45.69	B-box type zinc finger family protein	[more]
AT5G54470.1	3.7e-23	46.34	B-box type zinc finger family protein	[more]
AT4G15248.1	3.6e-10	35.23	B-box type zinc finger family protein	[more]
AT3G21890.1	1.0e-09	50.00	B-box type zinc finger family protein	[more]
AT4G15250.1	1.4e-09	43.06	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 19..65 e-value: 2.1E-7 score: 40.6
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 20..63 e-value: 6.3E-6 score: 26.2
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 19..65 score: 9.143394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..134
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 23..144
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 23..144
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 23..65 e-value: 9.92029E-11 score: 51.9147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001380.1	PI0001380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding