PI0001287 (gene) Melon (PI 482460) v1

Overview
NamePI0001287
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 9853944 .. 9854210 (+)
RNA-Seq ExpressionPI0001287
SyntenyPI0001287
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCTGCAAAATTGCCTTCCTTTATTTTCTTCCTTCTCATTGCATTGATATTCTTAAATCTGCTCTCAAAATTTGCAGCACAAAACCTTCATTCTCCACCGCCACCGTCACGGCCTCCTGCAAACAATAACCAACTCACTAGGAAGCCATGGGAGAGCCTGGCTCGGCCACCATCAAGGCCGCCACCATCAAGTCGGCCGCCAGGATCCGATCACCAATGGCCAAATCATCCCGTTCGTATATCGCCTCCACCTCCTTTCTAG

mRNA sequence

ATGGGGTCTGCAAAATTGCCTTCCTTTATTTTCTTCCTTCTCATTGCATTGATATTCTTAAATCTGCTCTCAAAATTTGCAGCACAAAACCTTCATTCTCCACCGCCACCGTCACGGCCTCCTGCAAACAATAACCAACTCACTAGGAAGCCATGGGAGAGCCTGGCTCGGCCACCATCAAGGCCGCCACCATCAAGTCGGCCGCCAGGATCCGATCACCAATGGCCAAATCATCCCGTTCGTATATCGCCTCCACCTCCTTTCTAG

Coding sequence (CDS)

ATGGGGTCTGCAAAATTGCCTTCCTTTATTTTCTTCCTTCTCATTGCATTGATATTCTTAAATCTGCTCTCAAAATTTGCAGCACAAAACCTTCATTCTCCACCGCCACCGTCACGGCCTCCTGCAAACAATAACCAACTCACTAGGAAGCCATGGGAGAGCCTGGCTCGGCCACCATCAAGGCCGCCACCATCAAGTCGGCCGCCAGGATCCGATCACCAATGGCCAAATCATCCCGTTCGTATATCGCCTCCACCTCCTTTCTAG

Protein sequence

MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPPPPSRPPANNNQLTRKPWESLARPPSRPPPSSRPPGSDHQWPNHPVRISPPPPF
Homology
BLAST of PI0001287 vs. ExPASy TrEMBL
Match: A0A0A0KF84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G337520 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.2e-30
Identity = 75/88 (85.23%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPPPPSRPPANNNQLTRKPWESLARPPS 60
          MGSAKLPSFIF LLIALIFLNLLSKFAAQNLHS  P  RPPANN Q T KPWESL RPPS
Sbjct: 1  MGSAKLPSFIFSLLIALIFLNLLSKFAAQNLHSSLP--RPPANNKQFTEKPWESLLRPPS 60

Query: 61 RPPPSSRPPGSDHQWPNHPVRISPPPPF 89
          RPP  SRPPGSDHQWPN P+RISPPPPF
Sbjct: 61 RPP--SRPPGSDHQWPNQPIRISPPPPF 84

BLAST of PI0001287 vs. ExPASy TrEMBL
Match: A0A5D3DJG3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00070 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 72/88 (81.82%), Postives = 72/88 (81.82%), Query Frame = 0

Query: 1  MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPPPPSRPPANNNQLTRKPWESLARPPS 60
          MGSAKLPSFIF LLIALI LNLLSKFAAQNLHSPPP  RPPANN Q T KPWESL RPP 
Sbjct: 1  MGSAKLPSFIFSLLIALIILNLLSKFAAQNLHSPPP--RPPANNKQFTGKPWESLLRPP- 60

Query: 61 RPPPSSRPPGSDHQWPNHPVRISPPPPF 89
               SRPPGSDHQWPN PVR SPPPPF
Sbjct: 61 -----SRPPGSDHQWPNQPVRTSPPPPF 80

BLAST of PI0001287 vs. NCBI nr
Match: KGN47469.1 (hypothetical protein Csa_018822 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 75/88 (85.23%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPPPPSRPPANNNQLTRKPWESLARPPS 60
          MGSAKLPSFIF LLIALIFLNLLSKFAAQNLHS  P  RPPANN Q T KPWESL RPPS
Sbjct: 1  MGSAKLPSFIFSLLIALIFLNLLSKFAAQNLHSSLP--RPPANNKQFTEKPWESLLRPPS 60

Query: 61 RPPPSSRPPGSDHQWPNHPVRISPPPPF 89
          RPP  SRPPGSDHQWPN P+RISPPPPF
Sbjct: 61 RPP--SRPPGSDHQWPNQPIRISPPPPF 84

BLAST of PI0001287 vs. NCBI nr
Match: KAA0058930.1 (hypothetical protein E6C27_scaffold98G001050 [Cucumis melo var. makuwa] >TYK23702.1 hypothetical protein E5676_scaffold1607G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27
Identity = 72/88 (81.82%), Postives = 72/88 (81.82%), Query Frame = 0

Query: 1  MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPPPPSRPPANNNQLTRKPWESLARPPS 60
          MGSAKLPSFIF LLIALI LNLLSKFAAQNLHSPPP  RPPANN Q T KPWESL RPP 
Sbjct: 1  MGSAKLPSFIFSLLIALIILNLLSKFAAQNLHSPPP--RPPANNKQFTGKPWESLLRPP- 60

Query: 61 RPPPSSRPPGSDHQWPNHPVRISPPPPF 89
               SRPPGSDHQWPN PVR SPPPPF
Sbjct: 61 -----SRPPGSDHQWPNQPVRTSPPPPF 80

BLAST of PI0001287 vs. NCBI nr
Match: KAG6607626.1 (hypothetical protein SDJN03_00968, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-06
Identity = 46/104 (44.23%), Postives = 55/104 (52.88%), Query Frame = 0

Query: 1  MGSAKLPSFIFFLLIALIFLNLLSKFAAQNLHSPP-----PPSRP-----------PANN 60
          MGSA    FI  LLIAL+FL+L SKF AQ+   PP     P  +P           P+NN
Sbjct: 1  MGSATSSPFISSLLIALVFLDLASKFTAQSFVYPPARPIAPMLKPIAPYLRSLFASPSNN 60

Query: 61 NQLTRKPWESLARPPSRPPPSSRPPGSDHQWPNHPVRISPPPPF 89
           Q + +   SL+ PP       + PG DHQWPN  V  SPPPPF
Sbjct: 61 KQYSVRSGRSLSVPP-------QSPGPDHQWPNESVSKSPPPPF 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KF849.2e-3085.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G337520 PE=4 SV=1[more]
A0A5D3DJG31.1e-2781.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KGN47469.11.9e-2985.23hypothetical protein Csa_018822 [Cucumis sativus][more]
KAA0058930.12.3e-2781.82hypothetical protein E6C27_scaffold98G001050 [Cucumis melo var. makuwa] >TYK2370... [more]
KAG6607626.13.0e-0644.23hypothetical protein SDJN03_00968, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001287.1PI0001287.1mRNA