PI0001089 (gene) Melon (PI 482460) v1

Overview
NamePI0001089
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 30489855 .. 30491928 (-)
RNA-Seq ExpressionPI0001089
SyntenyPI0001089
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTTTTTATTGGACATTGAGTGGACTGATTGTGATGTGGTTACATATGATATCATCACACACGACATTATTTTCATATCAATCTTTACTTGAAGAAACATCCTAAAAACCAGCTCATATGCTAGAAGAGAATCCACCATTAATAACAAATATATAATTGAATGAAACTTGATCAAATAATAATATAATAAGTGAAGGAAAAAGAAAAAAAATAATAATAATAAAAGAAACAAGCTTTTAACAAAAATTCCACTCAAGAACAAAAAAGTGAACATACAATTTTATATTTTGAAAAGAAATTATTAACTAGTGTTCTTAGAATAATTTATTGAGTAGTTGAAGGAAAAAATATGAAAATTTATGGAGTAAATTAGTTTAAGAAAAATAAAATATGAATTTCTTAGTGTAATTAGATAAATTTTAGGGGACAATTTATTTTCTCTCTTTTGTGAATAGGAATATGTTTTTGAGATTTAATTGAATCGTAGCTTAATAGTCTTTATATACCAACAACCCACTAGCTAGATGTAATGTATAAGGTTGGAAAAGACCAACCTAGCTTTGGAAAAAAGAAAAAAGTTGTAGCTTTTACACCATTATAAGATTTTTTTTGTGGCATTTTTTCTTTTTTTTTGACATATACGTAGGTGGGAAAATCAAACTTCTATTGTTATGACAATTATATATAAGCTTTATGGTAATTAGATGAGTTGTTTCTCGTATTGGCATACTTATTTTTATTATTTTTAAATAAATCAATCATTTTTTTGCTGTAGGTTAAGTTAATGAATTAATATGATGTAAGAAAAAAATGATAGAATAAACGAAGAGACATTCTCAAATATAGCAAAATAAACCAAAATATTTACAAAATATAACAAAAATTTCAAATCTATATTTGATGATAGACATTGATAAACATTTTTGAACTTGTCTATGAAGTCTATCATTGATATATCTTAAATTTTTTTATATCTTGTGGATATTTCAACAGTTTTGCAATTTATAATAATTTCCCGTAAGAAAAACCAAATATTGTAAAGTAATTTAAAATGTCTAAAAGTATAGGAGAAAATATTTAATGAGACCATCAGGATTTGGCTGCTCTTATCAAGAAGTGTAGATTCATAAATCTATATATTCTTAATAATGATCATTGAATACAATTTTGAAATTATATTTTTTATTTTTCAAATCCGTATACATTCAATAAGTGAAAAATATACAACCACACTATGAATACCTCCTAAAATCATTTATCTATCTTTGACGTGAAAGAATTAAGAAAAGACAATTATAAACTTATCAACAATCATTAAAGGAGATGTCGAAGAAAATTATTAAGAGAGTACTGGTCAATTTTTAGCTTACCAATTGTAAATATTAGTGGAATTGAGTTGAGTTGGTTATTTTTATCAAATTTACTAATTCATCCAACTCGACACAACTCTTCATCGTTTAGTGTTTCAATGACTCATCGGCTGATGCCACACTAACTAAATTGTTGTTATTATTTTATTTTACGATAGGCAGAAGGTCAATAACACGATCTTAAGGTATGGTTGTGTTGTTAAAATTAAAGTTGGGAGAAGCTTAATTAATTTATCCTTGGGGATAATTTCATTAGTTTTAAAAGCAATTAACATGCACGTAGATGTAGTAATAACGTCCCCAATAATAATAATAATTAATTCATTGTTAGCATAATATATAAAGAAGGAAAAGGAAATGGAACGGTGAAAGGCAATAGAATACAACAAAACTCGGGGCGTTGAGTTTTCCATTCTCTCTCCTCCACGTGTCCAAAAAATAACTGCAAGAACTCACGACTTCTTTCCCTCCCTCTCCCCCTCCCCTGACCCTCTCCTTCACGCACCAGTTTTCCGGTGACCCCTACGACGAGCTCCGGCAACGGCATACGGACTTCGGCGACCAATCTTTATGTGACCGCATTGATGGTGTTACTCAAGAACTCACGACTCTCCCTCACTTTCGACAAGTTCTACAACGATGGAACCTGCATTCGACGGAAACACTCACTTCGTTGCTGTTTTTGGAATGATAAGTGA

mRNA sequence

ATGGCAATTTTTTATTGGACATTGAGTGGACTGATTGTGATTTTTCCGGTGACCCCTACGACGAGCTCCGGCAACGGCATACGGACTTCGGCGACCAATCTTTATGTGACCGCATTGATGGTGTTACTCAAGAACTCACGACTCTCCCTCACTTTCGACAAGTTCTACAACGATGGAACCTGCATTCGACGGAAACACTCACTTCGTTGCTGTTTTTGGAATGATAAGTGA

Coding sequence (CDS)

ATGGCAATTTTTTATTGGACATTGAGTGGACTGATTGTGATTTTTCCGGTGACCCCTACGACGAGCTCCGGCAACGGCATACGGACTTCGGCGACCAATCTTTATGTGACCGCATTGATGGTGTTACTCAAGAACTCACGACTCTCCCTCACTTTCGACAAGTTCTACAACGATGGAACCTGCATTCGACGGAAACACTCACTTCGTTGCTGTTTTTGGAATGATAAGTGA

Protein sequence

MAIFYWTLSGLIVIFPVTPTTSSGNGIRTSATNLYVTALMVLLKNSRLSLTFDKFYNDGTCIRRKHSLRCCFWNDK
Homology
[Close]
BLAST of PI0001089 vs. ExPASy TrEMBL
Match: A0A0A0LMZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302190 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 19 PTTSSGNGIRTSATNLYVTALMVLLKNSRLSLTFDKFYNDGTCIRRKHSLRCCFWND 76
          PT++S NG+RTSATN+YVTALMVLLKNSRLSLTFD F NDGTCIRRK+  RCCFWND
Sbjct: 17 PTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDNFNNDGTCIRRKYWPRCCFWND 73

[Close]
BLAST of PI0001089 vs. NCBI nr
Match: KGN62152.1 (hypothetical protein Csa_006517 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-18
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 19 PTTSSGNGIRTSATNLYVTALMVLLKNSRLSLTFDKFYNDGTCIRRKHSLRCCFWND 76
          PT++S NG+RTSATN+YVTALMVLLKNSRLSLTFD F NDGTCIRRK+  RCCFWND
Sbjct: 17 PTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDNFNNDGTCIRRKYWPRCCFWND 73

The following BLAST results are available for this feature:
BLAST of PI0001089 vs.
Match NameE-valueIdentityDescription
BLAST of PI0001089 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMZ41.1e-1882.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302190 PE=4 SV=1[more]
BLAST of PI0001089 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62152.12.2e-1882.46hypothetical protein Csa_006517 [Cucumis sativus][more]
BLAST of PI0001089 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001089.1PI0001089.1mRNA