PI0001065 (gene) Melon (PI 482460) v1

Overview
NamePI0001065
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 19741489 .. 19741840 (-)
RNA-Seq ExpressionPI0001065
SyntenyPI0001065
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGTATGAGTATTACATACCGGGAGGAGGAGAAGAAGAAGAAGAGAAGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATGGGAGGAATTGAAGCAGATCTCGGAGGGATTGTCTAATGAAATTTGAAATCCGCGGGGAAGTTGACAGATCCAAGGAAGTGAAGAGAATAAAAGAACAAATCTTGCATCTGGGGCAGTTCAAAAACCTAGATCTGCAATTGCAGAGAGAAGGGAGAGAGATTGGGGAAAAGGGAATGGAATATAGTGAGGAAGAAACAGAAGAAGGAACAAAAATTGGAGCAGTGGTTGAAAATGGAGGAGAGATGAAATCCTGA

mRNA sequence

ATGCAGCAGTATGAGTATTACATACCGGGAGGAGGAGAAGAAGAAGAAGAGAAGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATGGGAGGAATTGAAGCAGATCTCGGAGGGATTAATAAAAGAACAAATCTTGCATCTGGGGCAGTTCAAAAACCTAGATCTGCAATTGCAGAGAGAAGGGAGAGAGATTGGGGAAAAGGGAATGGAATATAGTGAGGAAGAAACAGAAGAAGGAACAAAAATTGGAGCAGTGGTTGAAAATGGAGGAGAGATGAAATCCTGA

Coding sequence (CDS)

ATGCAGCAGTATGAGTATTACATACCGGGAGGAGGAGAAGAAGAAGAAGAGAAGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATGGGAGGAATTGAAGCAGATCTCGGAGGGATTAATAAAAGAACAAATCTTGCATCTGGGGCAGTTCAAAAACCTAGATCTGCAATTGCAGAGAGAAGGGAGAGAGATTGGGGAAAAGGGAATGGAATATAGTGAGGAAGAAACAGAAGAAGGAACAAAAATTGGAGCAGTGGTTGAAAATGGAGGAGAGATGAAATCCTGA

Protein sequence

MQQYEYYIPGGGEEEEEKKGGGGGGGGGGGGEWEELKQISEGLIKEQILHLGQFKNLDLQLQREGREIGEKGMEYSEEETEEGTKIGAVVENGGEMKS
Homology
[Close]
BLAST of PI0001065 vs. ExPASy TrEMBL
Match: A0A0A0LC08 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597360 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.5e-08
Identity = 49/85 (57.65%), Postives = 50/85 (58.82%), Query Frame = 0 

Query: 1  MQQYEYYIPGGGEEEEEKKGGGGGGGGGGGGEWEELKQISEGLIKEQILHLGQFKNLDLQ 60
          MQQYEYYIP  GEEEE +K GG     G                       G  KNLDLQ
Sbjct: 1  MQQYEYYIP--GEEEEGRKMGGIEADLG-----------------------GILKNLDLQ 60

Query: 61 LQREGREIGEKGMEYSEEETEEGTK 86
          LQR GREIGEKGMEYSEEETEEGTK
Sbjct: 61 LQRGGREIGEKGMEYSEEETEEGTK 60

[Close]
BLAST of PI0001065 vs. NCBI nr
Match: KGN58237.1 (hypothetical protein Csa_017613 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07
Identity = 49/85 (57.65%), Postives = 50/85 (58.82%), Query Frame = 0 

Query: 1  MQQYEYYIPGGGEEEEEKKGGGGGGGGGGGGEWEELKQISEGLIKEQILHLGQFKNLDLQ 60
          MQQYEYYIP  GEEEE +K GG     G                       G  KNLDLQ
Sbjct: 1  MQQYEYYIP--GEEEEGRKMGGIEADLG-----------------------GILKNLDLQ 60

Query: 61 LQREGREIGEKGMEYSEEETEEGTK 86
          LQR GREIGEKGMEYSEEETEEGTK
Sbjct: 61 LQRGGREIGEKGMEYSEEETEEGTK 60

The following BLAST results are available for this feature:
BLAST of PI0001065 vs.
Match NameE-valueIdentityDescription
BLAST of PI0001065 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC088.5e-0857.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597360 PE=4 SV=1[more]
BLAST of PI0001065 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58237.11.7e-0757.65hypothetical protein Csa_017613 [Cucumis sativus][more]
BLAST of PI0001065 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001065.1PI0001065.1mRNA