PI0001023 (gene) Melon (PI 482460) v1

Overview
NamePI0001023
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 19300827 .. 19301150 (+)
RNA-Seq ExpressionPI0001023
SyntenyPI0001023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCGCAAAGTCTATGAGTGCATCCACAATAAGGTTAGCACTTGTATTCCTAGTCTACATAGTCATTTTAGCACCATCAGGGACAGCCCATACGATGGCCCCAGCACCAAGTCCATTAGTACTACTAGAGGATTCATCTTTCTCAAACTGCGCACCTTTTATTTTAGAAGCGACAATGTGTGTAGTAGATGTGATCAAGCTTCCAGTTGCTCCTCATCCTATCTGTTGCAAAGCCATTTCTGACCTTAACGATTGTGCTCCCGAAATTTATCAACATATTCCTGACATGGATGTGATTAAGAAAATTTGTGGCCTATGA

mRNA sequence

ATGGAGGGCGCAAAGTCTATGAGTGCATCCACAATAAGGTTAGCACTTGTATTCCTAGTCTACATAGTCATTTTAGCACCATCAGGGACAGCCCATACGATGGCCCCAGCACCAAGTCCATTAGTACTACTAGAGGATTCATCTTTCTCAAACTGCGCACCTTTTATTTTAGAAGCGACAATGTGTGTAGTAGATGTGATCAAGCTTCCAGTTGCTCCTCATCCTATCTGTTGCAAAGCCATTTCTGACCTTAACGATTGTGCTCCCGAAATTTATCAACATATTCCTGACATGGATGTGATTAAGAAAATTTGTGGCCTATGA

Coding sequence (CDS)

ATGGAGGGCGCAAAGTCTATGAGTGCATCCACAATAAGGTTAGCACTTGTATTCCTAGTCTACATAGTCATTTTAGCACCATCAGGGACAGCCCATACGATGGCCCCAGCACCAAGTCCATTAGTACTACTAGAGGATTCATCTTTCTCAAACTGCGCACCTTTTATTTTAGAAGCGACAATGTGTGTAGTAGATGTGATCAAGCTTCCAGTTGCTCCTCATCCTATCTGTTGCAAAGCCATTTCTGACCTTAACGATTGTGCTCCCGAAATTTATCAACATATTCCTGACATGGATGTGATTAAGAAAATTTGTGGCCTATGA

Protein sequence

MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLLEDSSFSNCAPFILEATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL
Homology
BLAST of PI0001023 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLL--EDSSFSNCAPFILE 60
           ME AKS SASTIRLALVFLV IVILAPS TAHTMA APSPL++L  +DSSFSNCAPFILE
Sbjct: 1   MEAAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILE 60

Query: 61  ATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           ATMC+VDVIKLPVAPHP CCKAISDLNDCAPEIYQHIP MDVIKKICGL
Sbjct: 61  ATMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPGMDVIKKICGL 109

BLAST of PI0001023 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLL--EDSSFSNCAPFILE 60
           ME AKS SASTIRLALVFLV IVILAPS TAHTMA APSPL++L  +DSSFSNCAPFILE
Sbjct: 1   MEAAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILE 60

Query: 61  ATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           ATMC+VDVIKLPVAPHP CCKAISDLNDCAPEIY HIP MDVIKKICGL
Sbjct: 61  ATMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPGMDVIKKICGL 109

BLAST of PI0001023 vs. ExPASy TrEMBL
Match: A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41
Identity = 92/110 (83.64%), Postives = 98/110 (89.09%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLL---EDSSFSNCAPFIL 60
           ME  KS SASTIRLA+VFLV IVILAPS TA TMA APSP+++L   +DSSFSNCAPFIL
Sbjct: 1   MEATKSTSASTIRLAIVFLVCIVILAPSVTARTMAEAPSPVLVLFDEDDSSFSNCAPFIL 60

Query: 61  EATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           EATMCVVDVIKLPVA HP CCKAISDLNDCAP+IYQHIPDMDVIKKICGL
Sbjct: 61  EATMCVVDVIKLPVASHPSCCKAISDLNDCAPQIYQHIPDMDVIKKICGL 110

BLAST of PI0001023 vs. ExPASy TrEMBL
Match: A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLLEDSSFSNCAPFILEAT 60
           ME  + MS   ++++L FLV + ILAPS TA T+A APSPL  LED SFSNC PFIL+AT
Sbjct: 1   MEENRGMSTFIMKISLTFLVGMAILAPSATATTVAAAPSPLA-LEDLSFSNCTPFILDAT 60

Query: 61  MCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           MCVV VIK PVAPHP CCKAISDLNDC+PE+YQHIP MDVIKKIC L
Sbjct: 61  MCVVSVIKFPVAPHPSCCKAISDLNDCSPEVYQHIPGMDVIKKICSL 106

BLAST of PI0001023 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 4   AKSMSASTIRLALVFLVYIVILAPSGT-AHTMAPAPSPLVLLEDSSFSNCAPFILEATMC 63
           A+S++ S ++L LVFLV I ILAPS T A T A APSP V  ++  F  CAPFILEAT+C
Sbjct: 3   AQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSV-PQNFPFLKCAPFILEATLC 62

Query: 64  VVDVIKLPVAPHPICCKAISDLNDCAPEIYQHI--PDMDVIKKICGL 108
           V DVIK P+APHP CCKAIS LNDCAPEIYQ I  PDMDVIKKIC L
Sbjct: 63  VTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of PI0001023 vs. NCBI nr
Match: TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLL--EDSSFSNCAPFILE 60
           ME AKS SASTIRLALVFLV IVILAPS TAHTMA APSPL++L  +DSSFSNCAPFILE
Sbjct: 1   MEAAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILE 60

Query: 61  ATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           ATMC+VDVIKLPVAPHP CCKAISDLNDCAPEIYQHIP MDVIKKICGL
Sbjct: 61  ATMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPGMDVIKKICGL 109

BLAST of PI0001023 vs. NCBI nr
Match: KAA0050064.1 (hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLL--EDSSFSNCAPFILE 60
           ME AKS SASTIRLALVFLV IVILAPS TAHTMA APSPL++L  +DSSFSNCAPFILE
Sbjct: 1   MEAAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILE 60

Query: 61  ATMCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           ATMC+VDVIKLPVAPHP CCKAISDLNDCAPEIY HIP MDVIKKICGL
Sbjct: 61  ATMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPGMDVIKKICGL 109

BLAST of PI0001023 vs. NCBI nr
Match: KAA0050068.1 (hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 3.5e-33
Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 0

Query: 1   MEGAKSMSASTIRLALVFLVYIVILAPSGTAHTMAPAPSPLVLLEDSSFSNCAPFILEAT 60
           ME  + MS   ++++L FLV + ILAPS TA T+A APSPL  LED SFSNC PFIL+AT
Sbjct: 1   MEENRGMSTFIMKISLTFLVGMAILAPSATATTVAAAPSPLA-LEDLSFSNCTPFILDAT 60

Query: 61  MCVVDVIKLPVAPHPICCKAISDLNDCAPEIYQHIPDMDVIKKICGL 108
           MCVV VIK PVAPHP CCKAISDLNDC+PE+YQHIP MDVIKKIC L
Sbjct: 61  MCVVSVIKFPVAPHPSCCKAISDLNDCSPEVYQHIPGMDVIKKICSL 106

BLAST of PI0001023 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-27
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 4   AKSMSASTIRLALVFLVYIVILAPSGT-AHTMAPAPSPLVLLEDSSFSNCAPFILEATMC 63
           A+S++ S ++L LVFLV I ILAPS T A T A APSP V  ++  F  CAPFILEAT+C
Sbjct: 3   AQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSV-PQNFPFLKCAPFILEATLC 62

Query: 64  VVDVIKLPVAPHPICCKAISDLNDCAPEIYQHI--PDMDVIKKICGL 108
           V DVIK P+APHP CCKAIS LNDCAPEIYQ I  PDMDVIKKIC L
Sbjct: 63  VTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of PI0001023 vs. NCBI nr
Match: TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-22
Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 12  IRLALVFLVYIVILAPSGT-AHTMAPAPSPLVLLEDSSFSNCAPFILEATMCVVDVIKLP 71
           ++L LVFLV I ILAPS T A T A APSP V  ++  F  CAPFILEAT+CV  VIK P
Sbjct: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSV-PQNFPFLKCAPFILEATLCVTGVIKFP 60

Query: 72  VAPHPICCKAISDLNDCAPEIYQHIP--DMDVIKKICGL 108
           +APHP CCKAIS L DCAP+IYQ IP  DM+VIKK C L
Sbjct: 61  IAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGL71.4e-4388.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4A75.2e-4387.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LTD62.2e-4183.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1[more]
A0A5A7U4751.7e-3371.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9A11.8e-2768.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK10344.12.8e-4388.07hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa][more]
KAA0050064.11.1e-4287.16hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa][more]
KAA0050068.13.5e-3371.03hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa][more]
KAA0050069.13.7e-2768.22hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... [more]
TYK10334.13.6e-2265.66hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001023.1PI0001023.1mRNA