PI0001008 (gene) Melon (PI 482460) v1

Overview


Name	PI0001008
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr07: 4518540 .. 4519523 (+)
RNA-Seq Expression	PI0001008
Synteny	PI0001008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTCTCAAAATTCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGACAAGCTTTCCACTCCCATTCCCCGTTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCCTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGGCGAGTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGCTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCGCGCCACTTCTGAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCCCCCTCGGAGAAAGTCGAGATTGTGTACCAGGACAAACAGATCATTACGGAGGAGAGGGTTGGTTCAAATTATTCAATAGATTGTGAAATTGAAGTGAAGAACTCGGATCTGGAGTCGGAATCGGGATTAGGTCACTCGAAAGTGATTTTGAGGACTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTGTATAACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTACTTCATTGCGACGGTTAATCTCCGGCTGAAAATTAGACGATTAAAAATTTTAAAAAAAAAAAGAAGAAAAAAGAAAAACTTGGCCGTACTATTTATGTTGTGCAATGTACAGAGTAAAATTTCTTTTACCTAGAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTCTTTTAGATTGTGAGTTTTGTTTGTCTGTTACTCGTCTTATTGTTGCTTGCTGGACTTGCATTTGACAATTGATC

mRNA sequence

CCTCTCTCAAAATTCCACAGAAATGGATTTCTTCTTCTTCGACAAAGCAGACAAGCTTTCCACTCCCATTCCCCGTTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCCTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGGCGAGTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGCTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCGCGCCACTTCTGAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCCCCCTCGGAGAAAGTCGAGATTGTGTACCAGGACAAACAGATCATTACGGAGGAGAGGGTTGGTTCAAATTATTCAATAGATTGTGAAATTGAAGTGAAGAACTCGGATCTGGAGTCGGAATCGGGATTAGGTCACTCGAAAGTGATTTTGAGGACTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTGTATAACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTACTTCATTGCGACGGTTAATCTCCGGCTGAAAATTAGACGATTAAAAATTTTAAAAAAAAAAAGAAGAAAAAAGAAAAACTTGGCCGTACTATTTATGTTGTGCAATGTACAGAGTAAAATTTCTTTTACCTAGAGAAGGGTAAAATTGGTATTTTAAATTCCTTCTTCTTTTAGATTGTGAGTTTTGTTTGTCTGTTACTCGTCTTATTGTTGCTTGCTGGACTTGCATTTGACAATTGATC

Coding sequence (CDS)

ATGGATTTCTTCTTCTTCGACAAAGCAGACAAGCTTTCCACTCCCATTCCCCGTTGCAATCTCCTCCAAATCTTCTCCAAGTTCTTCCGTTTTCTAGAACTTTCCTTCCTCCTCCTCTCCCTCTCATGGATCCTCTCTCGCCTTCCCATCGCCCTCAGAATCTCCGGCGAGTATTTCACTAAACTCTTCGCCTTCATCGCCACTCCTCTCTTCGGCTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCTCAATTCTCACGCCGCGCCACTTCTGAAACCGATCGGATTTATGAAGACCTCATTGAAAAAACCGGAACCGGATCGGACTTAACTGATTCCCCCTCGGAGAAAGTCGAGATTGTGTACCAGGACAAACAGATCATTACGGAGGAGAGGGTTGGTTCAAATTATTCAATAGATTGTGAAATTGAAGTGAAGAACTCGGATCTGGAGTCGGAATCGGGATTAGGTCACTCGAAAGTGATTTTGAGGACTTTGTCGGAGAAACTTAACCGAGAATGTGTGAAAACGCAGAGTGAGAAGCTTCGACGATCGGAGACAGAGAAGTGCCGGAATCTGGAGTATTCGAATGACATTTTGTATAACCAGGATGATTTGAGTAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTTATAGCTAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTCCGCCATTGTTGTACTTCATTGCGACGGTTAA

Protein sequence

MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATSETDRIYEDLIEKTGTGSDLTDSPSEKVEIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRECVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

Homology

[Close]

BLAST of PI0001008 vs. ExPASy TrEMBL
Match: A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.1e-116
Identity = 228/247 (92.31%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWI SRLPIALRIS +YFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-ETDRIYEDLIEKTGTGSDLTDSP 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR ATS +TDRIYEDLIEKTGTGSDLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRE 180
           SE+V EIVYQDK+II E RVGSNYS DCEIE+KN+DLES+SGLGHSKVILR+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 246
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of PI0001008 vs. ExPASy TrEMBL
Match: A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.1e-116
Identity = 228/247 (92.31%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWI SRLPIALRIS +YFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-ETDRIYEDLIEKTGTGSDLTDSP 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR ATS +TDRIYEDLIEKTGTGSDLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRE 180
           SE+V EIVYQDK+II E RVGSNYS DCEIE+KN+DLES+SGLGHSKVILR+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 246
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of PI0001008 vs. ExPASy TrEMBL
Match: A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.3e-113
Identity = 225/247 (91.09%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWI SRLPIALRIS +YFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-ETDRIYEDLIEKTGTGSDLTDSP 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR ATS +TDRIYEDLIE TGTGSDLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRE 180
           SE+V EIVYQDK+II E RVGSNYS DCEIE+KN+DLES+SGL HSKVILR+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 246
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of PI0001008 vs. ExPASy TrEMBL
Match: A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112
Identity = 224/246 (91.06%), Postives = 231/246 (93.90%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWI SRLPIALRIS EY T
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATSETDRIYEDLIEKTGTGSDLTDSPS 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRR TSET RIYEDLI+KTGTGSDLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNREC 180
           E+V EIVYQDKQII E RVGSNYS DCEIEVKN+DLESESGLG SKVILR+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEKC NLE +NDIL  QDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

Query: 241 VLHCDG 246
           VLHCDG
Sbjct: 241 VLHCDG 246

[Close]

BLAST of PI0001008 vs. ExPASy TrEMBL
Match: A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.3e-83
Identity = 184/252 (73.02%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEY 60
           MDFFFFDKA+K  T IPR  CNLLQIF+K FRFLEL  LL+ LSWILSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-----ETDRIYEDLIEKTGTGS 120
           FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S R  +     ETDR+YEDLI K+G G 
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120

Query: 121 DLTDSPSEKVEIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSE 180
           DL +SPSE  EIV+QDK+II E    +  SID ++EVK++D E+ESG+ H KVI RTLSE
Sbjct: 121 DLPESPSEDGEIVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSE 180

Query: 181 KLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRR 240
           K+ REC KTQSEKLRRSETEKCRN LE S+DI+Y QDDLSSEEFQRKIEAFIA+EKKFRR
Sbjct: 181 KIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRR 240

Query: 241 EESSAIVVLHCD 245
           EESSAI VLH D
Sbjct: 241 EESSAI-VLHSD 246

[Close]

BLAST of PI0001008 vs. NCBI nr
Match: XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 426.4 bits (1095), Expect = 1.7e-115
Identity = 228/247 (92.31%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWI SRLPIALRIS +YFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-ETDRIYEDLIEKTGTGSDLTDSP 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR ATS +TDRIYEDLIEKTGTGSDLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRE 180
           SE+V EIVYQDK+II E RVGSNYS DCEIE+KN+DLES+SGLGHSKVILR+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 246
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of PI0001008 vs. NCBI nr
Match: KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 419.1 bits (1076), Expect = 2.7e-113
Identity = 225/247 (91.09%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFR LELSFLLLSLSWI SRLPIALRIS +YFT
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-ETDRIYEDLIEKTGTGSDLTDSP 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSR ATS +TDRIYEDLIE TGTGSDLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRE 180
           SE+V EIVYQDK+II E RVGSNYS DCEIE+KN+DLES+SGL HSKVILR+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEKCRNLEYSNDILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

Query: 241 VVLHCDG 246
           VVLHCDG
Sbjct: 241 VVLHCDG 247

[Close]

BLAST of PI0001008 vs. NCBI nr
Match: XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.8e-112
Identity = 224/246 (91.06%), Postives = 231/246 (93.90%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+KLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWI SRLPIALRIS EY T
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATSETDRIYEDLIEKTGTGSDLTDSPS 120
           KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRR TSET RIYEDLI+KTGTGSDLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EKV-EIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNREC 180
           E+V EIVYQDKQII E RVGSNYS DCEIEVKN+DLESESGLG SKVILR+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEKC NLE +NDIL  QDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

Query: 241 VLHCDG 246
           VLHCDG
Sbjct: 241 VLHCDG 246

[Close]

BLAST of PI0001008 vs. NCBI nr
Match: XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 8.0e-102
Identity = 211/252 (83.73%), Postives = 226/252 (89.68%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEYFT 60
           MDFFFFDKA+K+S PIPRCNLLQIF+KFFRFLELSFLLL LSWILSRLPIAL +S EYF 
Sbjct: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60

Query: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-------ETDRIYEDLIEKTGTGS 120
           KLFAF+ATPLFGFLLCNAIIVALVAKP+QF R A+S       E DRIYEDLIEKTG+G 
Sbjct: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG- 120

Query: 121 DLTDSPSEKVEIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSE 180
           DLTDS SE+VEIVYQDKQII E   G N SID EIEVKN+DLE+ESGLGHSKV+LRTLSE
Sbjct: 121 DLTDSLSEEVEIVYQDKQIIAE---GIN-SIDREIEVKNTDLETESGLGHSKVMLRTLSE 180

Query: 181 KLNRECVKTQSEKLRRSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRRE 240
           KLNRECV T+ EKLRRSETEKCRNLE+SNDILY+QDDLSSEEFQRKIEAFIAKEKKFRRE
Sbjct: 181 KLNRECVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRRE 240

Query: 241 ESSAIVVLHCDG 246
           ESSAIVVLHCDG
Sbjct: 241 ESSAIVVLHCDG 247

[Close]

BLAST of PI0001008 vs. NCBI nr
Match: XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-82
Identity = 184/252 (73.02%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MDFFFFDKADKLSTPIPR--CNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEY 60
           MDFFFFDKA+K  T IPR  CNLLQIF+K FRFLEL  LL+ LSWILSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRATS-----ETDRIYEDLIEKTGTGS 120
           FTKLFAF+A+PLFGF+LCNAIIVALVAKPSQ S R  +     ETDR+YEDLI K+G G 
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG- 120

Query: 121 DLTDSPSEKVEIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSE 180
           DL +SPSE  EIV+QDK+II E    +  SID ++EVK++D E+ESG+ H KVI RTLSE
Sbjct: 121 DLPESPSEDGEIVFQDKEIIAE----AINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSE 180

Query: 181 KLNRECVKTQSEKLRRSETEKCRN-LEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRR 240
           K+ REC KTQSEKLRRSETEKCRN LE S+DI+Y QDDLSSEEFQRKIEAFIA+EKKFRR
Sbjct: 181 KIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRR 240

Query: 241 EESSAIVVLHCD 245
           EESSAI VLH D
Sbjct: 241 EESSAI-VLHSD 246

[Close]

BLAST of PI0001008 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27
Identity = 95/252 (37.70%), Postives = 143/252 (56.75%), Query Frame = 0


Query: 1   MDFFFFD--KADKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWILSRLPIALRISGEY 60
           MD F FD  KA+K +  + R N      +FFR  E+   LL + W  S+LP  ++ISG +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FTKLFAFIATPLFGFLLCNAIIVALVAKPS-QFSRRATSETDRIYEDLIEKTGTGSDLTD 120
             ++ A I+TPLF FLL N+I+V L+ K S Q +    S    IY+  +      S  +D
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETEIYQAFVRSVENRSKPSD 120

Query: 121 SPSEKVEIVYQDKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNR 180
               +  IVY DKQ+I  + + SN ++  +  + + +++S+S   HSKV  R+ S+   +
Sbjct: 121 EDLTE-GIVYDDKQVIVTD-LDSNPNLTVDENMPHVEIDSDSS-PHSKVYGRSKSDVSGK 180

Query: 181 E----CVKTQSEKLRRSETEK-CRNLEYSNDI----LYNQDDLSSEEFQRKIEAFIAKEK 240
           +     +      L+RSETEK C+  E  +D      Y +DDLS+EEFQ+ IEAFIAK++
Sbjct: 181 QSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQR 240

[Close]

BLAST of PI0001008 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 9.4e-08
Identity = 62/231 (26.84%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 22  LQIFSKFFRFLELSFLLLSLSWILSRLPI-ALRISGEYFTKLFAFIATPLFGFLLCNAII 81
           ++ F+  FR  EL  L++    ++S+L   +++ISG+ F +   F+ +P F F + NAI+
Sbjct: 23  IRSFTSLFRLFELLLLVI----LISKLSFPSVKISGDIFKEAAVFLVSPRFVFFIGNAIV 82

Query: 82  VALVAKPSQF------SRRAT-SETDRIYEDLIEKTGTGSDLTDSPSEKVEIVY-----Q 141
           + L+AK  ++      S+ AT + ++ +Y++ + K+           +K  +VY     Q
Sbjct: 83  ITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKS----------EKKKPVVYATKTEQ 142

Query: 142 DKQIITEERVGSNYSIDCEIEVKNSDLESESGLGHSKVILRTLSEKLNRECVKTQSEKLR 201
            K+    +RV    S   +       LES +G    K + R +SEK  R C   +   +R
Sbjct: 143 LKKPSGGKRVSFGRSQSHKAFEAVKPLESTNG---EKNMKRYVSEKHMRVCDSDKKVVVR 202

Query: 202 RSETEKCRNLEYSNDILYNQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
             + E               D +S+E+F+ KIEAFIA++K+ +++E   I+
Sbjct: 203 VKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDEEHLII 221

The following BLAST results are available for this feature:

BLAST of PI0001008 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYU3	8.1e-116	92.31	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3BT40	8.1e-116	92.31	uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=...	[more]
A0A5A7TU70	1.3e-113	91.09	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A0A0KY10	1.9e-112	91.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1	[more]
A0A6J1C5K3	5.3e-83	73.02	uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of PI0001008 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452094.1	1.7e-115	92.31	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat...	[more]
KAA0044789.1	2.7e-113	91.09	putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C...	[more]
XP_011653156.1	3.8e-112	91.06	uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ...	[more]
XP_038888396.1	8.0e-102	83.73	uncharacterized protein LOC120078241 [Benincasa hispida]	[more]
XP_022136879.1	1.1e-82	73.02	uncharacterized protein LOC111008461, partial [Momordica charantia]	[more]

BLAST of PI0001008 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	4.1e-27	37.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	9.4e-08	26.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 8..242
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 8..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001008.1	PI0001008.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity