PI0000940 (gene) Melon (PI 482460) v1

Overview


Name	PI0000940
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	arabinogalactan peptide 22-like
Location	chr07: 5208988 .. 5210377 (-)
RNA-Seq Expression	PI0000940
Synteny	PI0000940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGATTTGATTTCCTCCGTCTCTCTCTCCCATCGCTAAACACTTCCTCTGTTTCCGTTCAGAGATTTCTTCTTCATTTCGCCTTTCGAGGAGGGAAAGAGAGATTCCTTTCTTTCTCTCTCTCTGCGATCCTCTTCAAGCCATAGAAGCCCACAACCATCGCAGAGGGAGATCCTCCACACCACCATTCCCACTCCAATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCATTCCTTGGCTCCAGCACCCGCTCCCACCAGCGATGGTTAGTTCTCTCTCTTTATCTTCTGTTTTGCATTTCTGTTCCAGATCTGTCTAGATTCTGGATCTCTCTTTTTAAATCACTTCTGTTTCTTTTGGAAATTTACTTTTCTTCATGAATTATGCTCAAATCTCAAATCATGGATCTGTTTTCCATACATGTATTCTCAATCTTGCGAGAGTTCATTCAGATCGATTTGTGGACCAAATGTTAGGAATGCCAAATATGTAGATTCTATTTTCTTCTATTCATAACAACATCATAAAGTCATTTCATAGTTTCAATAGTTATTAATTGTCCCATTTATGAGTTCAATTAAACCAACTAGAATAATTTTAGGTCCTACGACTTTTGATGTCAAGAAAATTATATGAAATCTTAAATAGTTGACCATGATGGATGATTCGACTCATTCTTCAAAATCAACCATTGGCATAACTATTATTGCTTTACTTTACAGAACAAAGGTGTTTCCTCATGAAGTTCTATTCTCAAAAGGCCATTTTAAGCTTAATTTAAACAGTTGTTATTTGAAATGCAAAATTCCTAATTAAGGAGAATTAGGGATGAAATACTTAGATTTTGTTAATGAAATTAATTAGTATGTTTGTAATGAAATTTGACAGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACTTCTAAAAGATTTGTATCAAAGCATTTGTAGGACATCTTTGATTAAAGGGAGGGAAAGGAATTTAGTTAGAAATTAATGCAAATGGGGTTTTTGTGGGAATTTGATTCTTTTTTGCACATTGTAATTCCTTTGGAACCCTCTTTTGATCAAAGGAGAAGGGAATTTAGTTAGAAATGCAAATGGGTTTTGAGGGATTTTATTACCATTTTTTTTTAATTTAAAAAGTAGTTCATTTGGGTGTTTCTGTTTTTTGGTCTTTATTTATAATGATGAGTCTGTTTGTGTGGTCTCTTTGTATTGCTATGTACAGTGTCCTAATTTGGAATGAGATTTATTGGGGTTTCCCTATTTTTCTTTA

mRNA sequence

AAAGATTTGATTTCCTCCGTCTCTCTCTCCCATCGCTAAACACTTCCTCTGTTTCCGTTCAGAGATTTCTTCTTCATTTCGCCTTTCGAGGAGGGAAAGAGAGATTCCTTTCTTTCTCTCTCTCTGCGATCCTCTTCAAGCCATAGAAGCCCACAACCATCGCAGAGGGAGATCCTCCACACCACCATTCCCACTCCAATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCATTCCTTGGCTCCAGCACCCGCTCCCACCAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACTTCTAAAAGATTTGTATCAAAGCATTTGTAGGACATCTTTGATTAAAGGGAGGGAAAGGAATTTAGTTAGAAATTAATGCAAATGGGGTTTTTGTGGGAATTTGATTCTTTTTTGCACATTGTAATTCCTTTGGAACCCTCTTTTGATCAAAGGAGAAGGGAATTTAGTTAGAAATGCAAATGGGTTTTGAGGGATTTTATTACCATTTTTTTTTAATTTAAAAAGTAGTTCATTTGGGTGTTTCTGTTTTTTGGTCTTTATTTATAATGATGAGTCTGTTTGTGTGGTCTCTTTGTATTGCTATGTACAGTGTCCTAATTTGGAATGAGATTTATTGGGGTTTCCCTATTTTTCTTTA

Coding sequence (CDS)

ATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCATTCCTTGGCTCCAGCACCCGCTCCCACCAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACTTCTAA

Protein sequence

MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

Homology

[Close]

BLAST of PI0000940 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16
Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTY
Sbjct: 1  MSGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]

BLAST of PI0000940 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-15
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 4  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH 63
          SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSNN 71
            D S++
Sbjct: 63 PLDASSS 69

[Close]

BLAST of PI0000940 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-14
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 4  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH 63
          SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSNNF 72
            D S+++
Sbjct: 63 PLDASSSY 70

[Close]

BLAST of PI0000940 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-14
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

[Close]

BLAST of PI0000940 vs. ExPASy TrEMBL
Match: A0A0A0KZS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051380 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADL 68
          LIHNADL
Sbjct: 61 LIHNADL 67

[Close]

BLAST of PI0000940 vs. ExPASy TrEMBL
Match: A0A5D3CYF3 (Arabinogalactan peptide 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004150 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-26
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADLSNN 71
          LIHNADLSNN
Sbjct: 61 LIHNADLSNN 70

[Close]

BLAST of PI0000940 vs. ExPASy TrEMBL
Match: A0A1S3BS55 (arabinogalactan peptide 22-like OS=Cucumis melo OX=3656 GN=LOC103493115 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-26
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADLSNN 71
          LIHNADLSNN
Sbjct: 61 LIHNADLSNN 70

[Close]

BLAST of PI0000940 vs. ExPASy TrEMBL
Match: A0A6J1C4C2 (arabinogalactan peptide 22-like OS=Momordica charantia OX=3673 GN=LOC111008162 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.5e-25
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRASFGFVAAAALIFAIFLPVAHPHSLPPAPAPSSDGTSIDQGIAYVLMLVALALTY 60

Query: 61 LIHNADLSNNF 72
          LIHNADLSN+F
Sbjct: 61 LIHNADLSNSF 71

[Close]

BLAST of PI0000940 vs. ExPASy TrEMBL
Match: A0A6J1ETC6 (arabinogalactan peptide 22-like OS=Cucurbita moschata OX=3662 GN=LOC111437536 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60

Query: 61 LIHNADLSNNF 72
          LIHNADLSN+F
Sbjct: 61 LIHNADLSNSF 71

[Close]

BLAST of PI0000940 vs. NCBI nr
Match: XP_004149756.1 (arabinogalactan protein 41 [Cucumis sativus] >KGN53386.1 hypothetical protein Csa_015198 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADL 68
          LIHNADL
Sbjct: 61 LIHNADL 67

[Close]

BLAST of PI0000940 vs. NCBI nr
Match: XP_008451971.1 (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo] >TYK16592.1 arabinogalactan peptide 22-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 6.0e-26
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADLSNN 71
          LIHNADLSNN
Sbjct: 61 LIHNADLSNN 70

[Close]

BLAST of PI0000940 vs. NCBI nr
Match: XP_038882280.1 (arabinogalactan protein 22-like [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVS +SFG LAA ALIFAIFLPVA PHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MAVSTASFGFLAAAALIFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIHNADLSNNF 72
          LIHNADLSN F
Sbjct: 61 LIHNADLSNTF 71

[Close]

BLAST of PI0000940 vs. NCBI nr
Match: XP_022136454.1 (arabinogalactan peptide 22-like [Momordica charantia])

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-25
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRASFGFVAAAALIFAIFLPVAHPHSLPPAPAPSSDGTSIDQGIAYVLMLVALALTY 60

Query: 61 LIHNADLSNNF 72
          LIHNADLSN+F
Sbjct: 61 LIHNADLSNSF 71

[Close]

BLAST of PI0000940 vs. NCBI nr
Match: XP_022931316.1 (arabinogalactan peptide 22-like [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.3e-24
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTY
Sbjct: 1  MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTY 60

Query: 61 LIHNADLSNNF 72
          LIHNADLSN+F
Sbjct: 61 LIHNADLSNSF 71

[Close]

BLAST of PI0000940 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 )

HSP 1 Score: 85.1 bits (209), Expect = 2.5e-17
Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTY
Sbjct: 1  MSGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60

Query: 61 LIH 64
          LIH
Sbjct: 61 LIH 63

[Close]

BLAST of PI0000940 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 )

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-16
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 4  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH 63
          SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSNN 71
            D S++
Sbjct: 63 PLDASSS 69

[Close]

BLAST of PI0000940 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 )

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-15
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 4  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH 63
          SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH
Sbjct: 3  SRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

Query: 64 NADLSNNF 72
            D S+++
Sbjct: 63 PLDASSSY 70

[Close]

BLAST of PI0000940 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 )

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-15
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 1  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTY 60
          MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTY 60

Query: 61 LIH 64
           IH
Sbjct: 61 FIH 63

The following BLAST results are available for this feature:

BLAST of PI0000940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T8	3.5e-16	69.84	Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1	[more]
Q9M373	2.2e-15	62.69	Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1	[more]
O82337	1.5e-14	61.76	Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1	[more]
Q9FK16	3.2e-14	66.67	Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1	[more]

BLAST of PI0000940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZS8	1.7e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051380 PE=4 SV=1	[more]
A0A5D3CYF3	2.9e-26	97.14	Arabinogalactan peptide 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BS55	2.9e-26	97.14	arabinogalactan peptide 22-like OS=Cucumis melo OX=3656 GN=LOC103493115 PE=4 SV=...	[more]
A0A6J1C4C2	2.5e-25	88.73	arabinogalactan peptide 22-like OS=Momordica charantia OX=3673 GN=LOC111008162 P...	[more]
A0A6J1ETC6	1.6e-24	88.73	arabinogalactan peptide 22-like OS=Cucurbita moschata OX=3662 GN=LOC111437536 PE...	[more]

BLAST of PI0000940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149756.1	3.5e-26	100.00	arabinogalactan protein 41 [Cucumis sativus] >KGN53386.1 hypothetical protein Cs...	[more]
XP_008451971.1	6.0e-26	97.14	PREDICTED: arabinogalactan peptide 22-like [Cucumis melo] >TYK16592.1 arabinogal...	[more]
XP_038882280.1	5.1e-25	91.55	arabinogalactan protein 22-like [Benincasa hispida]	[more]
XP_022136454.1	5.1e-25	88.73	arabinogalactan peptide 22-like [Momordica charantia]	[more]
XP_022931316.1	3.3e-24	88.73	arabinogalactan peptide 22-like [Cucurbita moschata]	[more]

BLAST of PI0000940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24105.1	2.5e-17	69.84	arabinogalactan protein 41	[more]
AT3G61640.1	1.6e-16	62.69	arabinogalactan protein 20	[more]
AT2G46330.1	1.0e-15	61.76	arabinogalactan protein 16	[more]
AT5G53250.1	2.3e-15	66.67	arabinogalactan protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009424	Arabinogalactan protein 16/20/22/41	PFAM	PF06376	AGP	coord: 31..63 e-value: 3.4E-18 score: 65.2
IPR009424	Arabinogalactan protein 16/20/22/41	PANTHER	PTHR33374	ARABINOGALACTAN PROTEIN 20	coord: 1..69
None	No IPR available	PANTHER	PTHR33374:SF34	ARABINOGALACTAN PROTEIN 22	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000940.1	PI0000940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane