Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGTGCAGTTTGGCGACAAAGAAAGCGGCGACGGCGGACATTCCAGATGCTCCTTTTGACGGGGTTGTCTTTGATTCCTCTGATGAGGACGATATTGCTATTGCTTCATTACTTCAATGTTCTTATTGAGCACCTAGTTCTACCTTTAAGTGATAAGGCATCTTTTCTGCCTAAGGTTAGTTCCGGTGGTTCTTCTGTCGTTCCTGTTGCATCAGCCCCTCTGTTGTTCCTTCTGCTCCTAGTCATCCTTCTCATCCTCCACCATTCAAAGGTCAGAAGGTTATTACTACTGTTGCTGGTAGACGCAAACTTCCTCATAATGTTCCCCCTGCGCCTATTGATGGAATCTCTTTCCACTGCAAGGAGAACGTTCACAAGTGGAAATATGTTCTGCAGCGCCATATTGCTGATGAAGTCAATATATCTGATCAACATCAGTCCTATCTGGCTATCATGGATCTTATCTCACGAGTTGGTCTCATCAAAACTGTTACTGCTGTTGGTGTCTTCTATCCCACCTTGATTAGGGAATTCATTGTCAATCTACCTGTTGAGTTTGATGTACTCAGTTCTCCTGAATTCAGGAAAGTGTTTGTCTGGGGACTGTGTTTTCAAGTCTCTCCTTCCTCAATCAACTAGTTTCTTGGATTGTCATCTTCCAAGGATGTATCTGTATCTTTGCCTCCACCAGAGACATTGGCTTCTGAATTAACAAGGAGTACTGTCCATATATGGCCTGCTGATGGTCAACTTCCTGCCATCTCTCTTAGTGTGAAATATGCTATACTCCACAAGATTGACATAGCCAACTGGTATCCTTCAACCCATGCTTCCACGGTCTCTACGACTCTAGCACATTTAATACATCAGATTGGTACTGGTTCTTCTGTTAATGTGAGTCAGTTTATTTTTAATCATCTGCTCCGCCATGTTGAGACGTTTGGCATCAAGATACCCATTTGTTTTCCCGCCTACTGTGTAGTTTCCTGATTTCCTAACATCCCTCTATGTTGACTGCGCATGATGCTCCTGGGGGCCCTCCTAAGACTCTGACGCTTACTATCGCCTCTTTCAAGGCTCTCATTCTCCTGATATTCCTCACTCAGTGCGCCCTCCTGGCTCTGGTCCTTTTGATCTTCCGGCTGGGATTCGTATGTATGATGATGGAGTTCTTCTTCCACCTGCCTTGGCTACCAGTATACTTAGACTTCTTTTAGATGAGTCTCAGTCGCTCAGTGGGATTATTCAATCTCTTGGGGTCCTCACTGATAGAAGGATTACAATTGACTCCATGCTGCAGTCTCTTACAACCTTGTTGCCTCCTTCTGGGGAGCCCTCTTCTTCCGCTCCATCTCCTCCCTAG
mRNA sequence
ATGGAGAAGTGCAGTTTGGCGACAAAGAAAGCGGCGACGGCGGACATTCCAGATGCTCCTTTTGACGGGGTTGTCTTTGATTCCTCTGATGAGGACGATATTGCTATTGCTTCATTACTTCAATGTCAGAAGGTTATTACTACTGTTGCTGGTAGACGCAAACTTCCTCATAATGTTCCCCCTGCGCCTATTGATGGAATCTCTTTCCACTGCAAGGAGAACGTTCACAAGTGGAAATATGTTCTGCAGCGCCATATTGCTGATGAAGTCAATATATCTGATCAACATCAGTCCTATCTGGCTATCATGGATCTTATCTCACGAGTTGGTCTCATCAAAACTGTTACTGCTGTTGGTGTCTTCTATCCCACCTTGATTAGGGAATTCATTGTCAATCTACCTGTTGAGTTTGATTTTCTTGGATTGTCATCTTCCAAGGATGTATCTGTATCTTTGCCTCCACCAGAGACATTGGCTTCTGAATTAACAAGGAGTACTGTCCATATATGGCCTGCTGATGGTCAACTTCCTGCCATCTCTCTTAGTGTGAAATATGCTATACTCCACAAGATTGACATAGCCAACTGGTATCCTTCAACCCATGCTTCCACGGTCTCTACGACTCTAGCACATTTAATACATCAGATTGGTACTGGTTCTTCTGTTAATGTGAACTCTGACGCTTACTATCGCCTCTTTCAAGGCTCTCATTCTCCTGATATTCCTCACTCAGTGCGCCCTCCTGGCTCTGGTCCTTTTGATCTTCCGGCTGGGATTCGTATGTATGATGATGGAGTTCTTCTTCCACCTGCCTTGGCTACCAGTATACTTAGACTTCTTTTAGATGAGTCTCAGTCGCTCAGTGGGATTATTCAATCTCTTGGGGTCCTCACTGATAGAAGGATTACAATTGACTCCATGCTGCAGTCTCTTACAACCTTGTTGCCTCCTTCTGGGGAGCCCTCTTCTTCCGCTCCATCTCCTCCCTAG
Coding sequence (CDS)
ATGGAGAAGTGCAGTTTGGCGACAAAGAAAGCGGCGACGGCGGACATTCCAGATGCTCCTTTTGACGGGGTTGTCTTTGATTCCTCTGATGAGGACGATATTGCTATTGCTTCATTACTTCAATGTCAGAAGGTTATTACTACTGTTGCTGGTAGACGCAAACTTCCTCATAATGTTCCCCCTGCGCCTATTGATGGAATCTCTTTCCACTGCAAGGAGAACGTTCACAAGTGGAAATATGTTCTGCAGCGCCATATTGCTGATGAAGTCAATATATCTGATCAACATCAGTCCTATCTGGCTATCATGGATCTTATCTCACGAGTTGGTCTCATCAAAACTGTTACTGCTGTTGGTGTCTTCTATCCCACCTTGATTAGGGAATTCATTGTCAATCTACCTGTTGAGTTTGATTTTCTTGGATTGTCATCTTCCAAGGATGTATCTGTATCTTTGCCTCCACCAGAGACATTGGCTTCTGAATTAACAAGGAGTACTGTCCATATATGGCCTGCTGATGGTCAACTTCCTGCCATCTCTCTTAGTGTGAAATATGCTATACTCCACAAGATTGACATAGCCAACTGGTATCCTTCAACCCATGCTTCCACGGTCTCTACGACTCTAGCACATTTAATACATCAGATTGGTACTGGTTCTTCTGTTAATGTGAACTCTGACGCTTACTATCGCCTCTTTCAAGGCTCTCATTCTCCTGATATTCCTCACTCAGTGCGCCCTCCTGGCTCTGGTCCTTTTGATCTTCCGGCTGGGATTCGTATGTATGATGATGGAGTTCTTCTTCCACCTGCCTTGGCTACCAGTATACTTAGACTTCTTTTAGATGAGTCTCAGTCGCTCAGTGGGATTATTCAATCTCTTGGGGTCCTCACTGATAGAAGGATTACAATTGACTCCATGCTGCAGTCTCTTACAACCTTGTTGCCTCCTTCTGGGGAGCCCTCTTCTTCCGCTCCATCTCCTCCCTAG
Protein sequence
MEKCSLATKKAATADIPDAPFDGVVFDSSDEDDIAIASLLQCQKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAIMDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFDFLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANWYPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAYYRLFQGSHSPDIPHSVRPPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITIDSMLQSLTTLLPPSGEPSSSAPSPP
Homology
BLAST of PI0000856 vs. ExPASy TrEMBL
Match:
A0A5D3DJ92 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00100 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 132/317 (41.64%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T GR+K+P NVP PIDG+SFH +E HKWKYV++R I DE NI D+ Y AI
Sbjct: 217 QRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFYPAI 276
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
++LI V LI TV+ VG FYP L+RE IVNLP +F+
Sbjct: 277 LELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSSELL 336
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D +VS P PE LA ELT TV +WP DGQLP SL VKY+ILH+I I+NW
Sbjct: 337 NSYLDITLPADYAVSYPTPERLAEELTGGTVPVWPVDGQLPVASLMVKYSILHRIGISNW 396
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY----------YRLFQGSHSPDIPHSVR 282
PS HAST+ST+L H ++ +GT S++ D RLFQG+H PD+
Sbjct: 397 IPSKHASTISTSLGHFVYLVGTKSTILTPLDTVGSAPRVIPLSMRLFQGAHFPDVAAEFD 456
Query: 283 PPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITIDS 319
G A V L +LA +L+ L+ +S++L+ I LTDRR +D+
Sbjct: 457 NAPGGTSTPAASQPAVGHPVTLCVSLANRLLQALIAKSRALTCQISE---LTDRRTVLDA 516
BLAST of PI0000856 vs. ExPASy TrEMBL
Match:
A0A1S3B3W7 (uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 132/317 (41.64%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T GR+K+P NVP PIDG+SFH +E HKWKYV++R I DE NI D+ Y AI
Sbjct: 203 QRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFYPAI 262
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
++LI V LI TV+ VG FYP L+RE IVNLP +F+
Sbjct: 263 LELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSSELL 322
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D +VS P PE LA ELT TV +WP DGQLP SL VKY+ILH+I I+NW
Sbjct: 323 NSYLDITLPADYAVSYPTPERLAEELTGGTVPVWPVDGQLPVASLMVKYSILHRIGISNW 382
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY----------YRLFQGSHSPDIPHSVR 282
PS HAST+ST+L H ++ +GT S++ D RLFQG+H PD+
Sbjct: 383 IPSKHASTISTSLGHFVYLVGTKSTILTPLDTVGSAPRVIPLSMRLFQGAHFPDVAAEFD 442
Query: 283 PPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITIDS 319
G A V L +LA +L+ L+ +S++L+ I LTDRR +D+
Sbjct: 443 NAPGGTSTPAASQPAVGHPVTLCVSLANRLLQALIAKSRALTCQISE---LTDRRTVLDA 502
BLAST of PI0000856 vs. ExPASy TrEMBL
Match:
A0A1S3CHP9 (uncharacterized protein LOC103500554 OS=Cucumis melo OX=3656 GN=LOC103500554 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 4.5e-53
Identity = 129/317 (40.69%), Postives = 176/317 (55.52%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T AGRRK+P NV PIDG+SFH KE HKWKYV+++ I DE NI+DQ+ + AI
Sbjct: 409 QQVVSTKAGRRKVPPNVSSLPIDGVSFHSKEGAHKWKYVVKQRITDEANIADQYNFFPAI 468
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
+ LI GLI+TV VG FYP L+RE I+NLP +F+
Sbjct: 469 LGLIRNAGLIRTVFEVGPFYPRLMRELIMNLPSDFNDPSVDEYQKVHIRGVCFNVSRELL 528
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D S P PE LA ELT TV +WP DGQLP SL+VKY+ILH+I I+NW
Sbjct: 529 NSYLDITLPADYEASYPTPERLAEELTGGTVPVWPVDGQLPVASLTVKYSILHRIGISNW 588
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSV------NVNS-----DAYYRLFQGSHSPDIPHSV 282
PSTHAST+ST+L H + +GTG S V S RLFQG+H PD+
Sbjct: 589 IPSTHASTISTSLGHFFYLMGTGQSTILTPLDTVGSAPRVIPLNMRLFQGAHFPDVAAEF 648
Query: 283 RPPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITID 323
G A V L +L +L+ L+ S++L+ + + LT+RR +D
Sbjct: 649 DNAQGGTSTPTASQPTVGHPVTLSMSLTNRLLQALIAVSRALT---RQISELTNRRTILD 708
BLAST of PI0000856 vs. ExPASy TrEMBL
Match:
A0A5A7VFF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00670 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 138/333 (41.44%), Postives = 192/333 (57.66%), Query Frame = 0
Query: 41 QCQKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYL 100
Q ++ ITT GR+K+P N+P PI+GISFH +ENV +WK+V+QR IADEVNISD+H S +
Sbjct: 222 QIRRNITTKVGRKKIPLNIPSVPINGISFHLEENVKRWKFVVQRRIADEVNISDKHHSCV 281
Query: 101 AIMDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD---------------------- 160
+IM+LI + GL KT++ VG FYP LIREFIVNLP +F+
Sbjct: 282 SIMNLIEKAGLSKTISDVGPFYPQLIREFIVNLPADFNDPSSPNYQTVHIKGFKFTISPT 341
Query: 161 ----FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIA 220
FLG + S + S S P + LA L+ + WP +G +P ++LSVKY ILHKI IA
Sbjct: 342 VINGFLGNAISINFSPSSPATDVLAFVLSGGILSSWPVNG-IPVVALSVKYVILHKIGIA 401
Query: 221 NWYPSTHASTVSTTLAHLIHQI------GTGSSVNVN------SDA----------YYRL 280
NW+PS+HAS+VS L +++I +G +++N SDA YRL
Sbjct: 402 NWFPSSHASSVSAALGTFLYRICNDDRFFSGLLLHLNAAMLTTSDAPGSDPNTLALSYRL 461
Query: 281 FQGSHSPDIPHSVRPPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQ 324
FQ SH PDI H V P DG + LA+ IL L +S+SLS
Sbjct: 462 FQDSHVPDIDHDVHPSREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLS---T 521
BLAST of PI0000856 vs. ExPASy TrEMBL
Match:
A0A5A7URQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00030 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 3.8e-52
Identity = 139/355 (39.15%), Postives = 191/355 (53.80%), Query Frame = 0
Query: 41 QCQKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYL 100
Q ++ +TT R+K+P NVP PIDGISFH +E+V WK+V+Q+ I DEVNISD+HQS +
Sbjct: 218 QARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISDKHQSCM 277
Query: 101 AIMDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD---------------------- 160
+IMDLI + GL KT++ VG FYP LIREFIVNLP EF+
Sbjct: 278 SIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPNEFNNPSSADYQTVHITGFKFVISLA 337
Query: 161 ----FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIA 220
FLG + D S S E LA+ L+ T+ WP +G +PA +L+VKYAILHKI I
Sbjct: 338 VIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLSTWPMNG-IPAAALNVKYAILHKIGIV 397
Query: 221 NWYPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY------------------------- 280
NW+PS+HAS++S L ++QI VN ++ Y
Sbjct: 398 NWFPSSHASSISAALGTFLYQIYNDDKVNTSALIYNQLLRHVGSFWVKRCLLHLMLLDPE 457
Query: 281 -------YRLFQGSHSPDIPHSVRPPGSGPFDLPAGIRMYD--------DGVLLPPALAT 330
YRLFQGSH PDI H V P G R++D +G + LAT
Sbjct: 458 PKTIALSYRLFQGSHVPDIDHDVHP--------TRGPRIFDTTDWDESAEGFYVDRELAT 517
BLAST of PI0000856 vs. NCBI nr
Match:
XP_008441650.1 (PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo])
HSP 1 Score: 222.2 bits (565), Expect = 6.4e-54
Identity = 132/317 (41.64%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T GR+K+P NVP PIDG+SFH +E HKWKYV++R I DE NI D+ Y AI
Sbjct: 203 QRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFYPAI 262
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
++LI V LI TV+ VG FYP L+RE IVNLP +F+
Sbjct: 263 LELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSSELL 322
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D +VS P PE LA ELT TV +WP DGQLP SL VKY+ILH+I I+NW
Sbjct: 323 NSYLDITLPADYAVSYPTPERLAEELTGGTVPVWPVDGQLPVASLMVKYSILHRIGISNW 382
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY----------YRLFQGSHSPDIPHSVR 282
PS HAST+ST+L H ++ +GT S++ D RLFQG+H PD+
Sbjct: 383 IPSKHASTISTSLGHFVYLVGTKSTILTPLDTVGSAPRVIPLSMRLFQGAHFPDVAAEFD 442
Query: 283 PPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITIDS 319
G A V L +LA +L+ L+ +S++L+ I LTDRR +D+
Sbjct: 443 NAPGGTSTPAASQPAVGHPVTLCVSLANRLLQALIAKSRALTCQISE---LTDRRTVLDA 502
BLAST of PI0000856 vs. NCBI nr
Match:
KAA0058927.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 222.2 bits (565), Expect = 6.4e-54
Identity = 132/317 (41.64%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T GR+K+P NVP PIDG+SFH +E HKWKYV++R I DE NI D+ Y AI
Sbjct: 217 QRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFYPAI 276
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
++LI V LI TV+ VG FYP L+RE IVNLP +F+
Sbjct: 277 LELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSSELL 336
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D +VS P PE LA ELT TV +WP DGQLP SL VKY+ILH+I I+NW
Sbjct: 337 NSYLDITLPADYAVSYPTPERLAEELTGGTVPVWPVDGQLPVASLMVKYSILHRIGISNW 396
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY----------YRLFQGSHSPDIPHSVR 282
PS HAST+ST+L H ++ +GT S++ D RLFQG+H PD+
Sbjct: 397 IPSKHASTISTSLGHFVYLVGTKSTILTPLDTVGSAPRVIPLSMRLFQGAHFPDVAAEFD 456
Query: 283 PPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITIDS 319
G A V L +LA +L+ L+ +S++L+ I LTDRR +D+
Sbjct: 457 NAPGGTSTPAASQPAVGHPVTLCVSLANRLLQALIAKSRALTCQISE---LTDRRTVLDA 516
BLAST of PI0000856 vs. NCBI nr
Match:
XP_008462125.1 (PREDICTED: uncharacterized protein LOC103500554 [Cucumis melo])
HSP 1 Score: 218.4 bits (555), Expect = 9.2e-53
Identity = 129/317 (40.69%), Postives = 176/317 (55.52%), Query Frame = 0
Query: 43 QKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYLAI 102
Q+V++T AGRRK+P NV PIDG+SFH KE HKWKYV+++ I DE NI+DQ+ + AI
Sbjct: 409 QQVVSTKAGRRKVPPNVSSLPIDGVSFHSKEGAHKWKYVVKQRITDEANIADQYNFFPAI 468
Query: 103 MDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD------------------------ 162
+ LI GLI+TV VG FYP L+RE I+NLP +F+
Sbjct: 469 LGLIRNAGLIRTVFEVGPFYPRLMRELIMNLPSDFNDPSVDEYQKVHIRGVCFNVSRELL 528
Query: 163 --FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIANW 222
+L ++ D S P PE LA ELT TV +WP DGQLP SL+VKY+ILH+I I+NW
Sbjct: 529 NSYLDITLPADYEASYPTPERLAEELTGGTVPVWPVDGQLPVASLTVKYSILHRIGISNW 588
Query: 223 YPSTHASTVSTTLAHLIHQIGTGSSV------NVNS-----DAYYRLFQGSHSPDIPHSV 282
PSTHAST+ST+L H + +GTG S V S RLFQG+H PD+
Sbjct: 589 IPSTHASTISTSLGHFFYLMGTGQSTILTPLDTVGSAPRVIPLNMRLFQGAHFPDVAAEF 648
Query: 283 RPPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQSLGVLTDRRITID 323
G A V L +L +L+ L+ S++L+ + + LT+RR +D
Sbjct: 649 DNAQGGTSTPTASQPTVGHPVTLSMSLTNRLLQALIAVSRALT---RQISELTNRRTILD 708
BLAST of PI0000856 vs. NCBI nr
Match:
KAA0066044.1 (uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99852.1 uncharacterized protein E5676_scaffold446G00670 [Cucumis melo var. makuwa])
HSP 1 Score: 216.9 bits (551), Expect = 2.7e-52
Identity = 138/333 (41.44%), Postives = 192/333 (57.66%), Query Frame = 0
Query: 41 QCQKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYL 100
Q ++ ITT GR+K+P N+P PI+GISFH +ENV +WK+V+QR IADEVNISD+H S +
Sbjct: 222 QIRRNITTKVGRKKIPLNIPSVPINGISFHLEENVKRWKFVVQRRIADEVNISDKHHSCV 281
Query: 101 AIMDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD---------------------- 160
+IM+LI + GL KT++ VG FYP LIREFIVNLP +F+
Sbjct: 282 SIMNLIEKAGLSKTISDVGPFYPQLIREFIVNLPADFNDPSSPNYQTVHIKGFKFTISPT 341
Query: 161 ----FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIA 220
FLG + S + S S P + LA L+ + WP +G +P ++LSVKY ILHKI IA
Sbjct: 342 VINGFLGNAISINFSPSSPATDVLAFVLSGGILSSWPVNG-IPVVALSVKYVILHKIGIA 401
Query: 221 NWYPSTHASTVSTTLAHLIHQI------GTGSSVNVN------SDA----------YYRL 280
NW+PS+HAS+VS L +++I +G +++N SDA YRL
Sbjct: 402 NWFPSSHASSVSAALGTFLYRICNDDRFFSGLLLHLNAAMLTTSDAPGSDPNTLALSYRL 461
Query: 281 FQGSHSPDIPHSVRPPGSGPFDLPAGIRMYDDGVLLPPALATSILRLLLDESQSLSGIIQ 324
FQ SH PDI H V P DG + LA+ IL L +S+SLS
Sbjct: 462 FQDSHVPDIDHDVHPSREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLS---T 521
BLAST of PI0000856 vs. NCBI nr
Match:
KAA0056211.1 (uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 215.3 bits (547), Expect = 7.8e-52
Identity = 139/355 (39.15%), Postives = 191/355 (53.80%), Query Frame = 0
Query: 41 QCQKVITTVAGRRKLPHNVPPAPIDGISFHCKENVHKWKYVLQRHIADEVNISDQHQSYL 100
Q ++ +TT R+K+P NVP PIDGISFH +E+V WK+V+Q+ I DEVNISD+HQS +
Sbjct: 218 QARRNVTTKTDRKKIPANVPSVPIDGISFHHEESVQYWKFVMQKRIVDEVNISDKHQSCM 277
Query: 101 AIMDLISRVGLIKTVTAVGVFYPTLIREFIVNLPVEFD---------------------- 160
+IMDLI + GL KT++ VG FYP LIREFIVNLP EF+
Sbjct: 278 SIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPNEFNNPSSADYQTVHITGFKFVISLA 337
Query: 161 ----FLGLSSSKDVSVSLPPPETLASELTRSTVHIWPADGQLPAISLSVKYAILHKIDIA 220
FLG + D S S E LA+ L+ T+ WP +G +PA +L+VKYAILHKI I
Sbjct: 338 VIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLSTWPMNG-IPAAALNVKYAILHKIGIV 397
Query: 221 NWYPSTHASTVSTTLAHLIHQIGTGSSVNVNSDAY------------------------- 280
NW+PS+HAS++S L ++QI VN ++ Y
Sbjct: 398 NWFPSSHASSISAALGTFLYQIYNDDKVNTSALIYNQLLRHVGSFWVKRCLLHLMLLDPE 457
Query: 281 -------YRLFQGSHSPDIPHSVRPPGSGPFDLPAGIRMYD--------DGVLLPPALAT 330
YRLFQGSH PDI H V P G R++D +G + LAT
Sbjct: 458 PKTIALSYRLFQGSHVPDIDHDVHP--------TRGPRIFDTTDWDESAEGFYVDRELAT 517
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DJ92 | 3.1e-54 | 41.64 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A1S3B3W7 | 3.1e-54 | 41.64 | uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=... | [more] |
| A0A1S3CHP9 | 4.5e-53 | 40.69 | uncharacterized protein LOC103500554 OS=Cucumis melo OX=3656 GN=LOC103500554 PE=... | [more] |
| A0A5A7VFF7 | 1.3e-52 | 41.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7URQ6 | 3.8e-52 | 39.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008441650.1 | 6.4e-54 | 41.64 | PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo] | [more] |
| KAA0058927.1 | 6.4e-54 | 41.64 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculat... | [more] |
| XP_008462125.1 | 9.2e-53 | 40.69 | PREDICTED: uncharacterized protein LOC103500554 [Cucumis melo] | [more] |
| KAA0066044.1 | 2.7e-52 | 41.44 | uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99... | [more] |
| KAA0056211.1 | 7.8e-52 | 39.15 | uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
