PI0000812 (gene) Melon (PI 482460) v1

Overview


Name	PI0000812
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4228 domain protein
Location	chr06: 26285348 .. 26285662 (-)
RNA-Seq Expression	PI0000812
Synteny	PI0000812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGCGATGACGACGAAGAGGTGGAGGAGATGCTGAGGAGGAGGCTAGTTGTCGAAAACGGAGCTCAGAAATGTTCAGCAAGTACCACAACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGTGCAAAGTGGATGTGGAGGACTTGCCAGTGACGGAGCTGTTATCGAAGTTAATCGACGTTGGCGATGCATTCGAGAGTACTGATCGGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCTGAGGTGAATTGA

mRNA sequence

ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGCGATGACGACGAAGAGGTGGAGGAGATGCTGAGGAGGAGGCTAGTTGTCGAAAACGGAGCTCAGAAATGTTCAGCAAGTACCACAACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGTGCAAAGTGGATGTGGAGGACTTGCCAGTGACGGAGCTGTTATCGAAGTTAATCGACGTTGGCGATGCATTCGAGAGTACTGATCGGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCTGAGGTGAATTGA

Coding sequence (CDS)

ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGCGATGACGACGAAGAGGTGGAGGAGATGCTGAGGAGGAGGCTAGTTGTCGAAAACGGAGCTCAGAAATGTTCAGCAAGTACCACAACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGTGCAAAGTGGATGTGGAGGACTTGCCAGTGACGGAGCTGTTATCGAAGTTAATCGACGTTGGCGATGCATTCGAGAGTACTGATCGGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCTGAGGTGAATTGA

Protein sequence

MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKLLCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN

Homology

[Close]

BLAST of PI0000812 vs. ExPASy TrEMBL
Match: A0A0A0L2D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGNCTSNKYLAET-MPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEK 60
           MGNCTSNKYLAET +PMSDDDEEVEEMLRRRLVV+NGAQKCSASTTTELKIRITKRELEK
Sbjct: 1   MGNCTSNKYLAETIVPMSDDDEEVEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEK 60

Query: 61  LLCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LLCKVDVE+LPVTELLSKLIDVGD FEST +RSWRPSLQSIPEVN
Sbjct: 61  LLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN 105

[Close]

BLAST of PI0000812 vs. ExPASy TrEMBL
Match: A0A5D3BTQ9 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00050 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.0e-45
Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSDD+EEVEEMLRRRLVVE+ AQKCSASTTTELKIRITK+ELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDDEEEVEEMLRRRLVVESRAQKCSASTTTELKIRITKKELEKL 60

Query: 61  LCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LCKVD+E+LPV ELLSKLIDVGDAFEST RRSW+PSLQSIPEVN
Sbjct: 61  LCKVDMEELPVAELLSKLIDVGDAFESTHRRSWQPSLQSIPEVN 104

[Close]

BLAST of PI0000812 vs. ExPASy TrEMBL
Match: A0A1S3CJ77 (uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.0e-45
Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSDD+EEVEEMLRRRLVVE+ AQKCSASTTTELKIRITK+ELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDDEEEVEEMLRRRLVVESRAQKCSASTTTELKIRITKKELEKL 60

Query: 61  LCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LCKVD+E+LPV ELLSKLIDVGDAFEST RRSW+PSLQSIPEVN
Sbjct: 61  LCKVDMEELPVAELLSKLIDVGDAFESTHRRSWQPSLQSIPEVN 104

[Close]

BLAST of PI0000812 vs. ExPASy TrEMBL
Match: A0A5A7SX05 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00540 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 14  MPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKLLCKVDVEDLPVTE 73
           MPMSDD+EEVEEMLRRRLVVE+ AQKCSASTTTELKIRITK+ELEKLLCKVD+E+LPV E
Sbjct: 1   MPMSDDEEEVEEMLRRRLVVESRAQKCSASTTTELKIRITKKELEKLLCKVDMEELPVAE 60

Query: 74  LLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LLSKLIDVGDAFEST RRSW+PSLQSIPEVN
Sbjct: 61  LLSKLIDVGDAFESTHRRSWQPSLQSIPEVN 91

[Close]

BLAST of PI0000812 vs. ExPASy TrEMBL
Match: A0A6J1J7P7 (uncharacterized protein LOC111483315 OS=Cucurbita maxima OX=3661 GN=LOC111483315 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.3e-30
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCS---ASTTTELKIRITKREL 60
           MGNCTSNKYLAETMPMS ++EE+ E L+R+L  ++GA + S    +TTTE+KIR+TKREL
Sbjct: 1   MGNCTSNKYLAETMPMS-EEEELVETLKRKLNADDGASRSSRGTTTTTTEVKIRMTKREL 60

Query: 61  EKLLCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEV 104
           EKLL KV+VE+LPVTELL +LI+VGD  EST RRSWRPSLQSIPE+
Sbjct: 61  EKLLSKVEVEELPVTELLLQLIEVGDESESTHRRSWRPSLQSIPEL 105

[Close]

BLAST of PI0000812 vs. NCBI nr
Match: XP_031739098.1 (uncharacterized protein LOC116402843 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.0e-45
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGNCTSNKYLAET-MPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEK 60
           MGNCTSNKYLAET +PMSDDDEEVEEMLRRRLVV+NGAQKCSASTTTELKIRITKRELEK
Sbjct: 1   MGNCTSNKYLAETIVPMSDDDEEVEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEK 60

Query: 61  LLCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LLCKVDVE+LPVTELLSKLIDVGD FEST +RSWRPSLQSIPEVN
Sbjct: 61  LLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN 105

[Close]

BLAST of PI0000812 vs. NCBI nr
Match: XP_008463409.1 (PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo] >TYK02554.1 DUF4228 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSDD+EEVEEMLRRRLVVE+ AQKCSASTTTELKIRITK+ELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDDEEEVEEMLRRRLVVESRAQKCSASTTTELKIRITKKELEKL 60

Query: 61  LCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LCKVD+E+LPV ELLSKLIDVGDAFEST RRSW+PSLQSIPEVN
Sbjct: 61  LCKVDMEELPVAELLSKLIDVGDAFESTHRRSWQPSLQSIPEVN 104

[Close]

BLAST of PI0000812 vs. NCBI nr
Match: XP_038904231.1 (uncharacterized protein LOC120090574 [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSD+DEE  E +RRRLVV +GA+KCSA+TTTELKIRITKRELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKL 60

Query: 61  LCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           L KVDVE+LPVTELLS+LIDVGDAFEST +RSWRPSLQSIPEVN
Sbjct: 61  LSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPEVN 104

[Close]

BLAST of PI0000812 vs. NCBI nr
Match: KAE8650133.1 (hypothetical protein Csa_011778 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1  MGNCTSNKYLAET-MPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEK 60
          MGNCTSNKYLAET +PMSDDDEEVEEMLRRRLVV+NGAQKCSASTTTELKIRITKRELEK
Sbjct: 1  MGNCTSNKYLAETIVPMSDDDEEVEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEK 60

Query: 61 LLCKVDVEDLPVTELLSKLIDVGDAFESTDRRSWRPSLQ 99
          LLCKVDVE+LPVTELLSKLIDVGD FEST +RSWRPSLQ
Sbjct: 61 LLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQ 99

[Close]

BLAST of PI0000812 vs. NCBI nr
Match: KAA0033991.1 (DUF4228 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 3.2e-36
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 14  MPMSDDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKLLCKVDVEDLPVTE 73
           MPMSDD+EEVEEMLRRRLVVE+ AQKCSASTTTELKIRITK+ELEKLLCKVD+E+LPV E
Sbjct: 1   MPMSDDEEEVEEMLRRRLVVESRAQKCSASTTTELKIRITKKELEKLLCKVDMEELPVAE 60

Query: 74  LLSKLIDVGDAFESTDRRSWRPSLQSIPEVN 105
           LLSKLIDVGDAFEST RRSW+PSLQSIPEVN
Sbjct: 61  LLSKLIDVGDAFESTHRRSWQPSLQSIPEVN 91

[Close]

BLAST of PI0000812 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-08
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 18  DDDEEVEEMLRRRLVVENGAQKCSASTTTELKIRITKRELEKLLCKVDVEDLPVTELLSK 77
           DD+++ E++L     V       S+S   E+KIRITK+ELE L+  + ++ L   E+LSK
Sbjct: 37  DDNDDGEKLLGETSNV-TSTSSSSSSERREIKIRITKKELEDLMRNIGLKSLTAEEILSK 96

Query: 78  LI-DVGD--AFESTD----RRSWRPSLQSIPEVN 105
           LI + GD   F + D     + W+P LQSIPE++
Sbjct: 97  LIFEGGDQIGFSAVDVTNHHQPWKPVLQSIPEMD 129

[Close]

BLAST of PI0000812 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. )

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-06
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 41  SASTTTELKIRITKRELEKLLCKVDVEDLPVTE--LLSKLIDVGDAFESTDRRSWRPSLQ 100
           S+  + E+KIR+TK++L  LL KV+V DL   +      +++     E+  +R WRP LQ
Sbjct: 50  SSVPSHEIKIRLTKKQLHDLLSKVNVHDLTFQQQTFSCPILNNRGYEEANQQRLWRPVLQ 109

Query: 101 SIPEVN 105
           SIPEVN
Sbjct: 110 SIPEVN 115

The following BLAST results are available for this feature:

BLAST of PI0000812 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2D8	2.4e-45	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1	[more]
A0A5D3BTQ9	7.0e-45	91.35	DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]
A0A1S3CJ77	7.0e-45	91.35	uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=...	[more]
A0A5A7SX05	1.6e-36	90.11	DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4...	[more]
A0A6J1J7P7	8.3e-30	69.81	uncharacterized protein LOC111483315 OS=Cucurbita maxima OX=3661 GN=LOC111483315...	[more]

BLAST of PI0000812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739098.1	5.0e-45	93.33	uncharacterized protein LOC116402843 [Cucumis sativus]	[more]
XP_008463409.1	1.5e-44	91.35	PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo] >TYK02554.1 DUF42...	[more]
XP_038904231.1	2.0e-41	86.54	uncharacterized protein LOC120090574 [Benincasa hispida]	[more]
KAE8650133.1	2.0e-41	92.93	hypothetical protein Csa_011778 [Cucumis sativus]	[more]
KAA0033991.1	3.2e-36	90.11	DUF4228 domain protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0000812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21920.1	5.2e-08	39.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G20340.1	2.2e-06	42.42	Expression of the gene is downregulated in the presence of paraquat, an inducer ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33647:SF5	OS01G0793900 PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR33647	OS01G0793900 PROTEIN	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000812.1	PI0000812.1	mRNA