PI0000752 (gene) Melon (PI 482460) v1

Overview


Name	PI0000752
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine/threonine-protein kinase atg1-like
Location	chr06: 16096276 .. 16096887 (-)
RNA-Seq Expression	PI0000752
Synteny	PI0000752

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGCGTGGGATACGACGGTCCTCACAACACCAACGCATGCCCACTAAATACAGAGACGGTCCTCGCAATTTGTATTTAGTGGGCATGCATCGGTGTTGTGTGGGAAGGAACGGGTCAACAAAATCAAGGGCGACAAAGTGGTCAAGGTGACCATCATGGTGAGGCATCTGGCCATTACCCGAGGTACCAAAACAATAGACCACAACATCCCCGACACCAACAACAGAACACCACCACTACTCCATCCTCATCTTCATCCATGGAGAACCTCCTCTGCAAGTACATGCAGAAGAATGATACTCTTCTACAGGGTCAAACCTCATCAATTCCCAATCTGGAAGTACAGTTGGGGCAGCTGGCCAACGATTTCTCTGGAAGGCCACAAGGATTACTACCAAGCAACACTGAAACGCCTAATCATGCGGGAGGATCTGAAAAAGAAAAGTGTCAAGCTGTGACATTGCGTAGTAGAAGGAATTTGACCATCTGCGACCCTGAATCTAAACGTAGAAATCCCACTTCTATTTCTAGTGCTGAGATTGGTAGCACAAGTAACAATTCTGATCCCTTAAATTTTTCTTTAACTAATAATGTTTTTTCCTCGTAG

mRNA sequence

ATGGGATGCGTGGGATACGACGGTCCTCACAACACCAACGCATGCCCACTAAATACAGAGACGTGGGCATGCATCGGTGTTGTGTGGGAAGGAACGGGTCAACAAAATCAAGGGCGACAAAGTGGTCAAGGTGACCATCATGGTGAGGCATCTGGCCATTACCCGAGGTACCAAAACAATAGACCACAACATCCCCGACACCAACAACAGAACACCACCACTACTCCATCCTCATCTTCATCCATGGAGAACCTCCTCTGCAAGTACATGCAGAAGAATGATACTCTTCTACAGGGTCAAACCTCATCAATTCCCAATCTGGAAGTACAGTTGGGGCAGCTGGCCAACGATTTCTCTGGAAGGCCACAAGGATTACTACCAAGCAACACTGAAACGCCTAATCATGCGGGAGGATCTGAAAAAGAAAAGTGTCAAGCTGTGACATTGCGTAGTAGAAGGAATTTGACCATCTGCGACCCTGAATCTAAACGTAGAAATCCCACTTCTATTTCTAGTGCTGAGATTGGTAGCACAAGTAACAATTCTGATCCCTTAAATTTTTCTTTAACTAATAATGTTTTTTCCTCGTAG

Coding sequence (CDS)

ATGGGATGCGTGGGATACGACGGTCCTCACAACACCAACGCATGCCCACTAAATACAGAGACGTGGGCATGCATCGGTGTTGTGTGGGAAGGAACGGGTCAACAAAATCAAGGGCGACAAAGTGGTCAAGGTGACCATCATGGTGAGGCATCTGGCCATTACCCGAGGTACCAAAACAATAGACCACAACATCCCCGACACCAACAACAGAACACCACCACTACTCCATCCTCATCTTCATCCATGGAGAACCTCCTCTGCAAGTACATGCAGAAGAATGATACTCTTCTACAGGGTCAAACCTCATCAATTCCCAATCTGGAAGTACAGTTGGGGCAGCTGGCCAACGATTTCTCTGGAAGGCCACAAGGATTACTACCAAGCAACACTGAAACGCCTAATCATGCGGGAGGATCTGAAAAAGAAAAGTGTCAAGCTGTGACATTGCGTAGTAGAAGGAATTTGACCATCTGCGACCCTGAATCTAAACGTAGAAATCCCACTTCTATTTCTAGTGCTGAGATTGGTAGCACAAGTAACAATTCTGATCCCTTAAATTTTTCTTTAACTAATAATGTTTTTTCCTCGTAG

Protein sequence

MGCVGYDGPHNTNACPLNTETWACIGVVWEGTGQQNQGRQSGQGDHHGEASGHYPRYQNNRPQHPRHQQQNTTTTPSSSSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEKEKCQAVTLRSRRNLTICDPESKRRNPTSISSAEIGSTSNNSDPLNFSLTNNVFSS

Homology

[Close]

BLAST of PI0000752 vs. ExPASy TrEMBL
Match: A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.1e-28
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 84  NLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEKEK 143
           N +    Q ND LLQ Q SSI NLE+QLGQL ++ S RP+G LPSNTETPN  GGS KEK
Sbjct: 18  NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77

Query: 144 CQAVTLRSRRNLTICDPESKRRNPTSISSAEIGSTSNNSDPLNFSLTNNVFS 196
           CQ VTLRSRRNLTI +P+ +RRN TS S+ +IGS SN+S+PLN SLTNN  S
Sbjct: 78  CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSSLTNNTSS 129

[Close]

BLAST of PI0000752 vs. ExPASy TrEMBL
Match: A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-21
Identity = 71/151 (47.02%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 4   VGYDGPHNTNACPLNTETWACIGVVWEGTGQQNQGRQSGQGDHHGEASGHYPRYQNNRPQ 63
           VG   PH T+AC LN E  A +   +  +   N G   G+   H +   HY R   + PQ
Sbjct: 88  VGCGEPHTTDACLLNAEIAAYV-KSYPYSNTYNAGNYRGEAPDHRQR--HYDRPHYSAPQ 147

Query: 64  HPRHQQQNTTTTPSSSSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQ 123
           H    QQ TT TPSS SSM  LL KYMQ+ D  +Q QT+SI NLE+ LGQLA DFSGRP 
Sbjct: 148 H----QQATTNTPSSFSSMVALLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPH 207

Query: 124 GLLPSNTETPNHAGGSEKEKCQAVTLRSRRN 155
           G LPSN E PNH  G  K K   +  R  ++
Sbjct: 208 GSLPSNIEVPNHNNGVHKNKGMEIPRRHEQH 231

[Close]

BLAST of PI0000752 vs. ExPASy TrEMBL
Match: A0A5D3DWD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00200 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.6e-19
Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 37  QGRQSGQGDHHGEASGHYPRYQNNRPQHPR-HQQQNTTTTPSSSSSMENLLCKYMQKNDT 96
           Q    GQG +HG+ASG+  R   +RP H    QQQ TT TPS SSSME L+  YM++ND 
Sbjct: 11  QNIDGGQGSYHGKASGYRQRQHQDRPHHSTPQQQQATTNTPSFSSSMETLIRGYMKRNDA 70

Query: 97  LLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEK 142
           LLQ Q +SI NLE+Q+GQ+A DFS RPQ  LPSNTE  N AG  +K
Sbjct: 71  LLQSQATSIRNLELQMGQIAIDFSERPQVFLPSNTEMSNQAGDLKK 116

[Close]

BLAST of PI0000752 vs. ExPASy TrEMBL
Match: A0A0A0KMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 48  GEASGHYPRYQNNRPQHP-----RHQQQNTTTTPSSSSSMENLLCKYMQKNDTLLQGQTS 107
           GE SG+ PR  +  PQ P      H    + ++ SS  SME+L  +YMQ+ND LLQ Q +
Sbjct: 31  GEVSGYCPRKYHEWPQQPIQHLNHHILNQSHSSSSSLPSMESLFQEYMQRNDALLQSQAA 90

Query: 108 SIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEKEKCQAVTL 150
           SI NLE+Q+GQ+AND S +P+G LPSNTE P   G S KEKCQAVTL
Sbjct: 91  SIKNLELQMGQIANDISRQPKGTLPSNTEIPIQGGSSGKEKCQAVTL 137

[Close]

BLAST of PI0000752 vs. ExPASy TrEMBL
Match: A0A0A0KN83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G403040 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.0e-17
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 79  SSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGG 138
           +  ME L  +YMQ+ND LLQ Q SSI NLE+QLGQLAND S RP+G L  NT+TP   GG
Sbjct: 45  TKDMEALFREYMQRNDALLQSQASSIKNLELQLGQLANDVSERPKGALLCNTKTPIQRGG 104

Query: 139 SEKEKCQAVTLRSRRNLTICDPESKR 165
           S  +K Q VTLRSRRNLTI + ES++
Sbjct: 105 SSNKKSQLVTLRSRRNLTIHELESEQ 130

[Close]

BLAST of PI0000752 vs. NCBI nr
Match: KAA0041246.1 (uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK16045.1 uncharacterized protein E5676_scaffold32G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-27
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 84  NLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEKEK 143
           N +    Q ND LLQ Q SSI NLE+QLGQL ++ S RP+G LPSNTETPN  GGS KEK
Sbjct: 18  NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77

Query: 144 CQAVTLRSRRNLTICDPESKRRNPTSISSAEIGSTSNNSDPLNFSLTNNVFS 196
           CQ VTLRSRRNLTI +P+ +RRN TS S+ +IGS SN+S+PLN SLTNN  S
Sbjct: 78  CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSSLTNNTSS 129

[Close]

BLAST of PI0000752 vs. NCBI nr
Match: KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 4.3e-21
Identity = 71/151 (47.02%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 4   VGYDGPHNTNACPLNTETWACIGVVWEGTGQQNQGRQSGQGDHHGEASGHYPRYQNNRPQ 63
           VG   PH T+AC LN E  A +   +  +   N G   G+   H +   HY R   + PQ
Sbjct: 88  VGCGEPHTTDACLLNAEIAAYV-KSYPYSNTYNAGNYRGEAPDHRQR--HYDRPHYSAPQ 147

Query: 64  HPRHQQQNTTTTPSSSSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQ 123
           H    QQ TT TPSS SSM  LL KYMQ+ D  +Q QT+SI NLE+ LGQLA DFSGRP 
Sbjct: 148 H----QQATTNTPSSFSSMVALLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPH 207

Query: 124 GLLPSNTETPNHAGGSEKEKCQAVTLRSRRN 155
           G LPSN E PNH  G  K K   +  R  ++
Sbjct: 208 GSLPSNIEVPNHNNGVHKNKGMEIPRRHEQH 231

[Close]

BLAST of PI0000752 vs. NCBI nr
Match: TYK27798.1 (hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-18
Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 37  QGRQSGQGDHHGEASGHYPRYQNNRPQHPR-HQQQNTTTTPSSSSSMENLLCKYMQKNDT 96
           Q    GQG +HG+ASG+  R   +RP H    QQQ TT TPS SSSME L+  YM++ND 
Sbjct: 11  QNIDGGQGSYHGKASGYRQRQHQDRPHHSTPQQQQATTNTPSFSSSMETLIRGYMKRNDA 70

Query: 97  LLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGGSEK 142
           LLQ Q +SI NLE+Q+GQ+A DFS RPQ  LPSNTE  N AG  +K
Sbjct: 71  LLQSQATSIRNLELQMGQIAIDFSERPQVFLPSNTEMSNQAGDLKK 116

[Close]

BLAST of PI0000752 vs. NCBI nr
Match: KGN51008.1 (hypothetical protein Csa_008461 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 8.3e-17
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 79  SSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDFSGRPQGLLPSNTETPNHAGG 138
           +  ME L  +YMQ+ND LLQ Q SSI NLE+QLGQLAND S RP+G L  NT+TP   GG
Sbjct: 45  TKDMEALFREYMQRNDALLQSQASSIKNLELQLGQLANDVSERPKGALLCNTKTPIQRGG 104

Query: 139 SEKEKCQAVTLRSRRNLTICDPESKR 165
           S  +K Q VTLRSRRNLTI + ES++
Sbjct: 105 SSNKKSQLVTLRSRRNLTIHELESEQ 130

[Close]

BLAST of PI0000752 vs. NCBI nr
Match: XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa])

HSP 1 Score: 96.3 bits (238), Expect = 3.2e-16
Identity = 66/153 (43.14%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 1   MGCVGYDGPHNTNACPLNTETWACIGVVWEGTGQQNQGRQSGQGDHHGEASGHYPR--YQ 60
           + CV     H    CP N  +   +G    G  +Q QG+QS            +P    Q
Sbjct: 217 ISCVYCGDGHTFENCPSNPASVCYVGASSSG-AEQAQGKQS------------FPPGFSQ 276

Query: 61  NNRPQHPRHQQQNTTTTPSSSSSMENLLCKYMQKNDTLLQGQTSSIPNLEVQLGQLANDF 120
             RPQ P HQ Q      S +SS+E+L+  YM KND ++Q Q +S+ NLE+QLGQLAND 
Sbjct: 277 QPRPQQP-HQPQG-----SQTSSLESLMRDYMAKNDAVIQSQAASLQNLEIQLGQLANDL 336

Query: 121 SGRPQGLLPSNTETPNHAGGSEKEKCQAVTLRS 152
             RPQG LPS+TE P   G   KE C+AVTLRS
Sbjct: 337 KNRPQGTLPSDTENPRRDG---KEHCKAVTLRS 347

The following BLAST results are available for this feature:

BLAST of PI0000752 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGS2	5.1e-28	65.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D2S0	2.1e-21	47.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DWD5	9.6e-19	56.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KMN3	1.1e-17	53.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1	[more]
A0A0A0KN83	4.0e-17	61.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G403040 PE=4 SV=1	[more]

BLAST of PI0000752 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041246.1	1.0e-27	65.18	uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0040852.1	4.3e-21	47.02	hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK1782...	[more]
TYK27798.1	2.0e-18	56.60	hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa]	[more]
KGN51008.1	8.3e-17	61.63	hypothetical protein Csa_008461 [Cucumis sativus]	[more]
XP_030494802.1	3.2e-16	43.14	uncharacterized protein LOC115710583 [Cannabis sativa]	[more]

BLAST of PI0000752 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000752.1	PI0000752.1	mRNA