PI0000707 (gene) Melon (PI 482460) v1

Overview
NamePI0000707
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 10503186 .. 10503395 (-)
RNA-Seq ExpressionPI0000707
SyntenyPI0000707
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTCCCACAATGGTGGTGCATCTACAAATGACGATGATGACATCACAAACGGTGGAGTTTGAACATGTTCATATGCTTGTGACCGACCATATTTATTTTCGTCACACCGTGAGCCTAAAGTCTCGTGTGCATTATGACCACCCCAAGATGCATTCTATCGTCACCCAAGTCACACGGCATTGTCATCATTCAATAGAGACATAA

mRNA sequence

ATGGCTCGTCCCACAATGGTGGTGCATCTACAAATGACGATGATGACATCACAAACGGTGGAGTTTGAACATGTTCATATGCTTGTGACCGACCATATTTATTTTCGTCACACCGTGAGCCTAAAGTCTCGTGTGCATTATGACCACCCCAAGATGCATTCTATCGTCACCCAAGTCACACGGCATTGTCATCATTCAATAGAGACATAA

Coding sequence (CDS)

ATGGCTCGTCCCACAATGGTGGTGCATCTACAAATGACGATGATGACATCACAAACGGTGGAGTTTGAACATGTTCATATGCTTGTGACCGACCATATTTATTTTCGTCACACCGTGAGCCTAAAGTCTCGTGTGCATTATGACCACCCCAAGATGCATTCTATCGTCACCCAAGTCACACGGCATTGTCATCATTCAATAGAGACATAA

Protein sequence

MARPTMVVHLQMTMMTSQTVEFEHVHMLVTDHIYFRHTVSLKSRVHYDHPKMHSIVTQVTRHCHHSIET
Homology
[Close]
BLAST of PI0000707 vs. ExPASy TrEMBL
Match: A0A0A0LXW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537390 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.5e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 1  MARPTMVVHLQMTMMTSQTVEFEHVHMLVTDHIYFRHTVSLKSRVHYDHPKMHSIVTQVT 60
          M  PTMVV+ QM     + VEF+ V ML+TDHI+F H VS  SRVH DH KMH +V+   
Sbjct: 2  MTHPTMVVYAQM-----KRVEFQQVDMLITDHIHFDHIVSQTSRVHCDHSKMHILVSSPK 58

Query: 61 RH 63
           H
Sbjct: 62 SH 58

[Close]
BLAST of PI0000707 vs. NCBI nr
Match: KGN65889.1 (hypothetical protein Csa_023172 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 1  MARPTMVVHLQMTMMTSQTVEFEHVHMLVTDHIYFRHTVSLKSRVHYDHPKMHSIVTQVT 60
          M  PTMVV+ QM     + VEF+ V ML+TDHI+F H VS  SRVH DH KMH +V+   
Sbjct: 2  MTHPTMVVYAQM-----KRVEFQQVDMLITDHIHFDHIVSQTSRVHCDHSKMHILVSSPK 58

Query: 61 RH 63
           H
Sbjct: 62 SH 58

The following BLAST results are available for this feature:
BLAST of PI0000707 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000707 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXW79.5e-0653.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537390 PE=4 SV=1[more]
BLAST of PI0000707 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65889.12.0e-0553.23hypothetical protein Csa_023172 [Cucumis sativus][more]
BLAST of PI0000707 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000707.1PI0000707.1mRNA