PI0000693 (gene) Melon (PI 482460) v1

Overview
NamePI0000693
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 4017468 .. 4019059 (-)
RNA-Seq ExpressionPI0000693
SyntenyPI0000693
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGCCAGCAAGTTTCACAAGATTCAATTTCATTATTACCTTTCTTAGCTTTTTCAACCAACTTCTTGAAGAATGAGAATATGCTCTTTTCCTTAGTTTTGTAATTGTTATATGAAAGACCACTCAATAGAATCGGGGGTGCACAACATAATGGACCAAACCGAAGATGTATATTTGGTCTCTGATTTTTTTTTAAGTGTTGAATAGGTCTTTAAATATTTAATTTTGTGTCAAAAACTTATGTTTAATATTTTCATAACAAATTCAACGTTTTTAATAGTTGGTTTCTCTGTTGATATAAATTTTGATTATTTGTCTAACGGAATTCTAAACTTAAGTGAGGGATATGGATTATATCTGTAATTTTAAAAGCTTAGAATCACATAAACAAAAAATTCAATGTTGAGATATTAAACGTTGTACATTTTATAGAATTATAATCTATTTTTGTAGATGCAACTTCTTTTTGTTTAACAATGTTTGAAATTGAAAAATTTCATAACCTCTTGATCATTGAATGGCACTTGAGTGTTTGATATATATATAATAATAAGAAATACCTCAAATCATTCAAAAGCCTCAGACGAGCAAAATAGAGATAAATTCCTTCATAGCAGTACGAAGGGAAAACCAAACACAACTTTCCTTCTCAATCTTTGCATATTTAATGATGGCATCAACAAGCAAATTACAAGAACGATGAACAAAAGTGAATACACAAGAATCAAAACTAGTTTGCAGCGAAAAAATTTCTTCAATCCAGCAGCAGATTTCATCATTAACAATTGATTTTCCAAAAGAAGATTGATCGCTTTGATGCAATCAAATTCCACGATGATACGACTGCGGTTCAGAGAAATCGAGAGAACCCCTCTTTAATAAGTGTTTCAGAAAATAAAAACATCCTTATAACTTTGCGTATATGTTGCATAATATTTTGTCTTACTTTAATATTTTTAAGTATCCAATTGTTAAACCTCCTCCTAAAAAAAAACTAAAATAAATAATAATAATAATAATAAAAATGCTAAAACCATTTTTTTAATAGTTTATTCTGAACGTAAATTTATTACCGGGAAATGCCGGCGTTTCGGTGTAATGGGCAGAATCCATGTTTTCGCGTATTCATCCCTCATTCCTCCAAATCCAGTTCTCTGATTCAGTGGTGATCAACAAAACGGAGCTATTCACTTCAAGGTTTCAGGTTATTTCTCTTCCTTTTCTTCACCATCTTCTTTGGATTCAAATTCAGCTCTGACTTCAACATTCATTAAACTTTCCACTTTCTCTCGTTGAAGCTCAAACCGATCCGAATTCGCAAATGTAATTATAATTATTGAATTTAGTTTTTGTTGATGCCCTCATGTTTCGTTCCTCGAATTGAATTTCTATTTCAGTCGGTTTTACTTTTCTTTTCGAATCTTGCACCTATGCTTTTCTCCTGGATATTTCGAACCCGCTACCGTTGTTTGAATCTACTATCTCCCTGTCCTACACTGACTTGACGAACCCTTTAACTCGGACTTGCTTCTGATTTTTAGTATTGGGTACTAACCAATTTATTTGTAGCCTGCAGGACATGTTCTAA

mRNA sequence

ATGAGTTGCCAGCAAGTTTCACAAGATTCAATTTCATTATTACCTTTCTTAGCTTTTTCAACCAACTTCTTGAAGAATGAGAATATGCTCTTTTCCTTAAAGATTGATCGCTTTGATGCAATCAAATTCCACGATGATACGACTGCGGTTCAGAGAAATCGAGAGAACCCCTCTTTAATAAGTAATCCATGTTTTCGCGTATTCATCCCTCATTCCTCCAAATCCAGTTCTCTGATTCAGTGCCTGCAGGACATGTTCTAA

Coding sequence (CDS)

ATGAGTTGCCAGCAAGTTTCACAAGATTCAATTTCATTATTACCTTTCTTAGCTTTTTCAACCAACTTCTTGAAGAATGAGAATATGCTCTTTTCCTTAAAGATTGATCGCTTTGATGCAATCAAATTCCACGATGATACGACTGCGGTTCAGAGAAATCGAGAGAACCCCTCTTTAATAAGTAATCCATGTTTTCGCGTATTCATCCCTCATTCCTCCAAATCCAGTTCTCTGATTCAGTGCCTGCAGGACATGTTCTAA

Protein sequence

MSCQQVSQDSISLLPFLAFSTNFLKNENMLFSLKIDRFDAIKFHDDTTAVQRNRENPSLISNPCFRVFIPHSSKSSSLIQCLQDMF
Homology
[Close]
BLAST of PI0000693 vs. ExPASy TrEMBL
Match: A0A0A0KH43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504540 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 1  MSCQQVSQDSISLLPFLAFSTNFLKNENMLFSLKIDRFDAIKFHDDTTAVQRNRENPSLI 60
          MSCQQVSQDS+SLL FLAFSTN LKNENM FS +          DDTTAVQRNRENPSLI
Sbjct: 1  MSCQQVSQDSVSLLHFLAFSTNLLKNENMPFSSQ----------DDTTAVQRNRENPSLI 60

Query: 61 SNPCFRVFIPHSSKSSSLIQ 81
          SNPCFRVFIP SSKS+SLIQ
Sbjct: 61 SNPCFRVFIPRSSKSTSLIQ 70

[Close]
BLAST of PI0000693 vs. NCBI nr
Match: KGN48873.1 (hypothetical protein Csa_003628 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 4.9e-22
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 1  MSCQQVSQDSISLLPFLAFSTNFLKNENMLFSLKIDRFDAIKFHDDTTAVQRNRENPSLI 60
          MSCQQVSQDS+SLL FLAFSTN LKNENM FS +          DDTTAVQRNRENPSLI
Sbjct: 1  MSCQQVSQDSVSLLHFLAFSTNLLKNENMPFSSQ----------DDTTAVQRNRENPSLI 60

Query: 61 SNPCFRVFIPHSSKSSSLIQ 81
          SNPCFRVFIP SSKS+SLIQ
Sbjct: 61 SNPCFRVFIPRSSKSTSLIQ 70

The following BLAST results are available for this feature:
BLAST of PI0000693 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000693 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH432.4e-2277.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504540 PE=4 SV=1[more]
BLAST of PI0000693 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48873.14.9e-2277.50hypothetical protein Csa_003628 [Cucumis sativus][more]
BLAST of PI0000693 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000693.1PI0000693.1mRNA