PI0000658 (gene) Melon (PI 482460) v1

Overview
NamePI0000658
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 29148232 .. 29148577 (+)
RNA-Seq ExpressionPI0000658
SyntenyPI0000658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAATCCTCGATAAAGTTTACTCTCATGTTCCTAATGTTCTTCATTATCTCAGGTACGTCAATAAATTTTAATTGTTTATAGCCATTTTTTCTTTTTGCAATAGTTATCTTATTGTATGACAATTAACAATTAAAATAATATTTCAGAAACGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCCAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGAGTGCAAACTCAACCTATGTTTTTGTCACCCAAATGGATTAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGGATATTTGAGAGAAGAAAAGACAACACTTCTTAAGAACTGA

mRNA sequence

ATGGTGAAATCCTCGATAAAGTTTACTCTCATGTTCCTAATGTTCTTCATTATCTCAGAAACGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCCAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGAGTGCAAACTCAACCTATGTTTTTGTCACCCAAATGGATTAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGGATATTTGAGAGAAGAAAAGACAACACTTCTTAAGAACTGA

Coding sequence (CDS)

ATGGTGAAATCCTCGATAAAGTTTACTCTCATGTTCCTAATGTTCTTCATTATCTCAGAAACGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCCAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGAGTGCAAACTCAACCTATGTTTTTGTCACCCAAATGGATTAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGGATATTTGAGAGAAGAAAAGACAACACTTCTTAAGAACTGA

Protein sequence

MVKSSIKFTLMFLMFFIISETFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNGLEKKFLHKAFPGYLREEKTTLLKN
Homology
BLAST of PI0000658 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MVKSSIKFTLMFLMFFIISETFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNGL 60
          MVKSS K  L+ LMFFIISETFV+DARNVVNIPC SRIDCSDPWDC+CKLNLCFCHP+GL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKAFPGYLREEKTTLL 82
          EKKFLH AFP +LREEKTT L
Sbjct: 61 EKKFLHNAFPEHLREEKTTSL 81

BLAST of PI0000658 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 1  MVKSSIKFTLMFLMFFIISE-TFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNG 60
          MVK   KF L FLM FIISE  FVSDARNVVNIPCQSRIDCSDPWDC+CKLNLCFCHP+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPGYLREEK 78
          LEKKFLHKAFP  LRE++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

BLAST of PI0000658 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-04
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 0

Query: 1  MVKSSIKFTLMFLMFFIISE-TFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNG 60
          M KSS+K  L+ ++  I S   F  DARNVV IPC++  DC D   C+C  N C C   G
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC--PG 60

Query: 61 LEKKFLHKAFPGYLREEKTTL 81
           E+ F  KA   +L+ +  +L
Sbjct: 61 EEQDFFTKAITNHLKHDLFSL 79

BLAST of PI0000658 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0

Query: 1  MVKSSIKFTLMFLMFFIISETFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNGL 60
          MVKSS K  L+ LMFFIISE FV++ARNVVNIPC SRIDCSDPWDC+CKLNLCFCHP+GL
Sbjct: 1  MVKSSTKLALLLLMFFIISEMFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKAFPGYLREEKTTLL 82
          EKKFLH AFP +LREEKTT L
Sbjct: 61 EKKFLHNAFPEHLREEKTTSL 81

BLAST of PI0000658 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 4.4e-28
Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 1  MVKSSIKFTLMFLMFFIISE-TFVSDARNVVNIPCQSRIDCSDPWDCECKLNLCFCHPNG 60
          MVK   KF L FLM FIISE  FVSDARNVVNIPCQSRIDCSDPWDC+CKLNLCFCHP+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPGYLREEK 78
          LEKKFLHKAFP  LRE++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJR01.4e-3283.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG32.1e-2882.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
A0A2N9FRQ04.8e-0440.74Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAE8651915.15.6e-3181.48hypothetical protein Csa_006059 [Cucumis sativus][more]
KGN61957.14.4e-2882.05hypothetical protein Csa_006779 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000658.1PI0000658.1mRNA